RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 VBP1P61758 197 aa12.43□□□□□ -0.42
RAP1B-229ENST00000543393 MZT2AQ6P582 158 aa12.43□□□□□ -0.42
RAP1B-229ENST00000543393 TMED4Q7Z7H5 227 aa12.43□□□□□ -0.42
RAP1B-229ENST00000543393 RPUSD4Q96CM3 377 aaKnown RBP12.43□□□□□ -0.42
RAP1B-229ENST00000543393 PARD6GQ9BYG4 376 aaPredicted RBP12.43□□□□□ -0.42
RAP1B-229ENST00000543393 Q6ZTI0 123 aa12.42□□□□□ -0.42
RAP1B-229ENST00000543393 SHANK2-AS3Q9BTD1 123 aa12.42□□□□□ -0.42
RAP1B-229ENST00000543393 A0A087X0K7 114 aa12.41□□□□□ -0.42
RAP1B-229ENST00000543393 PRSS46E5RG02 174 aa12.41□□□□□ -0.42
RAP1B-229ENST00000543393 GFI1BQ5VTD9 330 aa12.41□□□□□ -0.42
RAP1B-229ENST00000543393 LRRC20Q8TCA0 184 aa12.41□□□□□ -0.42
RAP1B-229ENST00000543393 C15orf40Q8WUR7 153 aa12.41□□□□□ -0.42
RAP1B-229ENST00000543393 RAP2BP61225 183 aa12.4□□□□□ -0.42
RAP1B-229ENST00000543393 AKR1C1Q04828 323 aa12.4□□□□□ -0.42
RAP1B-229ENST00000543393 SSBP1Q04837 148 aaKnown RBP12.4□□□□□ -0.42
RAP1B-229ENST00000543393 DAZ2Q13117 558 aaKnown RBP12.4□□□□□ -0.42
RAP1B-229ENST00000543393 HIGD1AQ9Y241 93 aa12.4□□□□□ -0.42
RAP1B-229ENST00000543393 PITX3O75364 302 aa12.39□□□□□ -0.43
RAP1B-229ENST00000543393 OR51S1Q8NGJ8 323 aa12.39□□□□□ -0.43
RAP1B-229ENST00000543393 PRRT1Q99946 306 aa12.39□□□□□ -0.43
RAP1B-229ENST00000543393 TMEM70Q9BUB7 260 aa12.39□□□□□ -0.43
RAP1B-229ENST00000543393 TRGV2A0A075B6R0 118 aa12.38□□□□□ -0.43
RAP1B-229ENST00000543393 KRTAP29-1A8MX34 341 aaPredicted RBP12.38□□□□□ -0.43
RAP1B-229ENST00000543393 AKAIN1P0CW23 69 aa12.38□□□□□ -0.43
RAP1B-229ENST00000543393 CCDC190Q86UF4 302 aa12.38□□□□□ -0.43
RAP1B-229ENST00000543393 FUNDC2Q9BWH2 189 aa12.38□□□□□ -0.43
RAP1B-229ENST00000543393 J3KRW8 73 aa12.37□□□□□ -0.43
RAP1B-229ENST00000543393 HYPMO75409 117 aa12.37□□□□□ -0.43
RAP1B-229ENST00000543393 IL5P05113 134 aa12.37□□□□□ -0.43
RAP1B-229ENST00000543393 OR5G3P0C626 314 aa12.37□□□□□ -0.43
RAP1B-229ENST00000543393 RPP30P78346 268 aaKnown RBP12.37□□□□□ -0.43
RAP1B-229ENST00000543393 CYP2G1PQ6ZSU1 146 aa12.37□□□□□ -0.43
RAP1B-229ENST00000543393 AP3S1Q92572 193 aa12.37□□□□□ -0.43
RAP1B-229ENST00000543393 VCX3AQ9NNX9 186 aa12.37□□□□□ -0.43
RAP1B-229ENST00000543393 ICOSQ9Y6W8 199 aa12.37□□□□□ -0.43
RAP1B-229ENST00000543393 HMCN2Q8NDA2 5059 aa12.37□□□□□ -0.43
RAP1B-229ENST00000543393 TRAV9-2A0A087WT02 112 aa12.36□□□□□ -0.43
RAP1B-229ENST00000543393 PMS2P5A8MQ11 134 aa12.36□□□□□ -0.43
RAP1B-229ENST00000543393 SRPXP78539 464 aa12.36□□□□□ -0.43
RAP1B-229ENST00000543393 ACOT7LQ6ZUV0 252 aa12.36□□□□□ -0.43
RAP1B-229ENST00000543393 PYGO2Q9BRQ0 406 aa12.36□□□□□ -0.43
RAP1B-229ENST00000543393 MSRB1Q9NZV6 116 aa12.36□□□□□ -0.43
RAP1B-229ENST00000543393 LY96Q9Y6Y9 160 aa12.36□□□□□ -0.43
RAP1B-229ENST00000543393 IGLV5-52A0A0A0MRZ9 124 aa12.35□□□□□ -0.43
RAP1B-229ENST00000543393 TRAV12-3A0A0B4J271 114 aa12.35□□□□□ -0.43
RAP1B-229ENST00000543393 WRBO00258 174 aa12.35□□□□□ -0.43
RAP1B-229ENST00000543393 MRPS12O15235 138 aaKnown RBP12.35□□□□□ -0.43
RAP1B-229ENST00000543393 PAX4O43316 350 aa12.35□□□□□ -0.43
RAP1B-229ENST00000543393 ZNF324O75467 553 aaPredicted RBP12.35□□□□□ -0.43
RAP1B-229ENST00000543393 MED6O75586 246 aa12.35□□□□□ -0.43
RAP1B-229ENST00000543393 ATP6V1G2O95670 118 aa12.35□□□□□ -0.43
RAP1B-229ENST00000543393 LINC00869P0C866 280 aa12.35□□□□□ -0.43
RAP1B-229ENST00000543393 ANXA3P12429 323 aa12.35□□□□□ -0.43
RAP1B-229ENST00000543393 PLP1P60201 277 aa12.35□□□□□ -0.43
RAP1B-229ENST00000543393 MRPS10P82664 201 aaKnown RBP12.35□□□□□ -0.43
RAP1B-229ENST00000543393 SERTAD4-AS1Q5TG53 156 aa12.35□□□□□ -0.43
RAP1B-229ENST00000543393 LYPD5Q6UWN5 251 aa12.35□□□□□ -0.43
RAP1B-229ENST00000543393 CLVS1Q8IUQ0 354 aaPredicted RBP12.35□□□□□ -0.43
RAP1B-229ENST00000543393 CIB3Q96Q77 187 aaPredicted RBP12.35□□□□□ -0.43
RAP1B-229ENST00000543393 ZNF331Q9NQX6 463 aaPredicted RBP12.35□□□□□ -0.43
RAP1B-229ENST00000543393 PRAC2D3DTV9 90 aa12.34□□□□□ -0.43
RAP1B-229ENST00000543393 SNRPCP09234 159 aaKnown RBP12.34□□□□□ -0.43
RAP1B-229ENST00000543393 ANXA7P20073 488 aaKnown RBP12.34□□□□□ -0.43
RAP1B-229ENST00000543393 SPANXN5Q5MJ07 72 aa12.34□□□□□ -0.43
RAP1B-229ENST00000543393 SMIM4Q8WVI0 70 aa12.34□□□□□ -0.43
RAP1B-229ENST00000543393 SCGB3A2Q96PL1 93 aa12.34□□□□□ -0.43
RAP1B-229ENST00000543393 LINC00467Q9BRT7 94 aa12.34□□□□□ -0.43
RAP1B-229ENST00000543393 GSN-AS1Q9NRJ2 163 aa12.34□□□□□ -0.43
RAP1B-229ENST00000543393 FUT9Q9Y231 359 aa12.34□□□□□ -0.43
RAP1B-229ENST00000543393 A0A087WXM4 84 aa12.33□□□□□ -0.44
RAP1B-229ENST00000543393 TRGV1A0A0A0MS02 117 aa12.33□□□□□ -0.44
RAP1B-229ENST00000543393 DUXBA0A1W2PPF3 345 aa12.33□□□□□ -0.44
RAP1B-229ENST00000543393 SMCO3A2RU48 225 aa12.33□□□□□ -0.44
RAP1B-229ENST00000543393 NPIPB6E9PJ23 425 aa12.33□□□□□ -0.44
RAP1B-229ENST00000543393 SYNGR2O43760 224 aa12.33□□□□□ -0.44
RAP1B-229ENST00000543393 CXCL2P19875 107 aa12.33□□□□□ -0.44
RAP1B-229ENST00000543393 LCN15Q6UWW0 184 aa12.33□□□□□ -0.44
RAP1B-229ENST00000543393 C11orf72Q8NBR9 251 aa12.33□□□□□ -0.44
RAP1B-229ENST00000543393 SYT8Q8NBV8 401 aa12.33□□□□□ -0.44
RAP1B-229ENST00000543393 ZNF431Q8TF32 576 aaPredicted RBP12.33□□□□□ -0.44
RAP1B-229ENST00000543393 SLC50A1Q9BRV3 221 aa12.33□□□□□ -0.44
RAP1B-229ENST00000543393 MIXL1Q9H2W2 232 aa12.33□□□□□ -0.44
RAP1B-229ENST00000543393 SCP2D1Q9UJQ7 156 aa12.33□□□□□ -0.44
RAP1B-229ENST00000543393 LINC00854A0A1B0GVQ3 168 aa12.32□□□□□ -0.44
RAP1B-229ENST00000543393 H3BP45 60 aa12.32□□□□□ -0.44
RAP1B-229ENST00000543393 CT45A10P0DMU9 189 aa12.32□□□□□ -0.44
RAP1B-229ENST00000543393 PATE2Q6UY27 113 aa12.32□□□□□ -0.44
RAP1B-229ENST00000543393 FAM30AQ9NZY2 134 aa12.32□□□□□ -0.44
RAP1B-229ENST00000543393 PIGBOS1A0A0B4J2F0 54 aa12.31□□□□□ -0.44
RAP1B-229ENST00000543393 PLA2G1BP04054 148 aaKnown RBP12.31□□□□□ -0.44
RAP1B-229ENST00000543393 SLC25A6P12236 298 aa12.31□□□□□ -0.44
RAP1B-229ENST00000543393 LEPP41159 167 aa12.31□□□□□ -0.44
RAP1B-229ENST00000543393 S100A7AQ86SG5 101 aa12.31□□□□□ -0.44
RAP1B-229ENST00000543393 ZNF680Q8NEM1 530 aa12.31□□□□□ -0.44
RAP1B-229ENST00000543393 ARL6Q9H0F7 186 aa12.31□□□□□ -0.44
RAP1B-229ENST00000543393 STRAPQ9Y3F4 350 aaKnown RBP12.31□□□□□ -0.44
RAP1B-229ENST00000543393 K7EP13 123 aa12.3□□□□□ -0.44
RAP1B-229ENST00000543393 SLC17A3O00476 420 aa12.3□□□□□ -0.44
RAP1B-229ENST00000543393 IGHV3-53P01767 116 aa12.3□□□□□ -0.44
RAP1B-229ENST00000543393 MRPL23Q16540 153 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms