RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 C10orf91Q5T1B1 145 aa10.63□□□□□ -0.71
TNC-212ENST00000542877 SMKR1H3BMG3 65 aa10.63□□□□□ -0.71
TNC-212ENST00000542877 TMEM14BQ9NUH8 114 aa10.63□□□□□ -0.71
TNC-212ENST00000542877 TNFRSF6BO95407 300 aa10.62□□□□□ -0.71
TNC-212ENST00000542877 ARMS2P0C7Q2 107 aa10.62□□□□□ -0.71
TNC-212ENST00000542877 C1orf147Q96MC9 270 aaPredicted RBP10.62□□□□□ -0.71
TNC-212ENST00000542877 MYMXA0A1B0GTQ4 84 aa10.62□□□□□ -0.71
TNC-212ENST00000542877 A0A1W2PPI3 338 aa10.62□□□□□ -0.71
TNC-212ENST00000542877 PAX4O43316 350 aa10.62□□□□□ -0.71
TNC-212ENST00000542877 PAX9P55771 341 aa10.62□□□□□ -0.71
TNC-212ENST00000542877 NPC2P61916 151 aa10.62□□□□□ -0.71
TNC-212ENST00000542877 JPT2Q9H910 190 aa10.62□□□□□ -0.71
TNC-212ENST00000542877 A0A0G2JNJ9 132 aa10.62□□□□□ -0.71
TNC-212ENST00000542877 FCN3O75636 299 aa10.62□□□□□ -0.71
TNC-212ENST00000542877 ZNF562Q6V9R5 426 aa10.62□□□□□ -0.71
TNC-212ENST00000542877 GATD1Q8NB37 220 aa10.62□□□□□ -0.71
TNC-212ENST00000542877 HS3ST6Q96QI5 342 aa10.62□□□□□ -0.71
TNC-212ENST00000542877 Q9UFV3 132 aa10.62□□□□□ -0.71
TNC-212ENST00000542877 MED12Q93074 2177 aa10.62□□□□□ -0.71
TNC-212ENST00000542877 IGHV3-73A0A0B4J1V6 119 aa10.62□□□□□ -0.71
TNC-212ENST00000542877 H3BUX3 64 aa10.61□□□□□ -0.71
TNC-212ENST00000542877 IGFL4Q6B9Z1 124 aa10.61□□□□□ -0.71
TNC-212ENST00000542877 LTBP1Q14766 1721 aa10.61□□□□□ -0.71
TNC-212ENST00000542877 LYPD2Q6UXB3 125 aa10.61□□□□□ -0.71
TNC-212ENST00000542877 LY6G5BQ8NDX9 201 aa10.61□□□□□ -0.71
TNC-212ENST00000542877 CST9LQ9H4G1 147 aa10.61□□□□□ -0.71
TNC-212ENST00000542877 NCOR1P1Q9H4R4 102 aa10.61□□□□□ -0.71
TNC-212ENST00000542877 A0A087WX48 190 aa10.61□□□□□ -0.71
TNC-212ENST00000542877 TIMM21Q9BVV7 248 aa10.61□□□□□ -0.71
TNC-212ENST00000542877 B4DSR2 109 aa10.6□□□□□ -0.71
TNC-212ENST00000542877 YPEL3P61236 119 aaPredicted RBP10.6□□□□□ -0.71
TNC-212ENST00000542877 OCIAD2Q56VL3 154 aa10.6□□□□□ -0.71
TNC-212ENST00000542877 MCRIP2Q9BUT9 160 aaKnown RBP10.6□□□□□ -0.71
TNC-212ENST00000542877 GTSF1LQ9H1H1 148 aa10.6□□□□□ -0.71
TNC-212ENST00000542877 TRGV1A0A0A0MS02 117 aa10.6□□□□□ -0.71
TNC-212ENST00000542877 PRSS46E5RG02 174 aa10.6□□□□□ -0.71
TNC-212ENST00000542877 C3orf36Q3SXR2 165 aa10.6□□□□□ -0.71
TNC-212ENST00000542877 RHPN1-AS1Q9BWJ2 59 aa10.6□□□□□ -0.71
TNC-212ENST00000542877 NDUFB8O95169 186 aa10.6□□□□□ -0.71
TNC-212ENST00000542877 ADAMTSL5Q6ZMM2 481 aa10.6□□□□□ -0.71
TNC-212ENST00000542877 NDUFA4L2Q9NRX3 87 aa10.6□□□□□ -0.71
TNC-212ENST00000542877 INTS1Q8N201 2190 aaKnown RBP10.6□□□□□ -0.71
TNC-212ENST00000542877 FAM231DQ6ZW35 169 aa10.6□□□□□ -0.71
TNC-212ENST00000542877 FAM104BQ5XKR9 115 aa10.59□□□□□ -0.71
TNC-212ENST00000542877 STPG4Q8N801 248 aa10.59□□□□□ -0.71
TNC-212ENST00000542877 SELENOKQ9Y6D0 94 aa10.59□□□□□ -0.71
TNC-212ENST00000542877 LEPROTO15243 131 aa10.59□□□□□ -0.71
TNC-212ENST00000542877 ERCC8Q13216 396 aa10.59□□□□□ -0.71
TNC-212ENST00000542877 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.59□□□□□ -0.71
TNC-212ENST00000542877 ZNF726P1Q15940 193 aa10.59□□□□□ -0.71
TNC-212ENST00000542877 SNHG12Q9BXW3 62 aa10.59□□□□□ -0.71
TNC-212ENST00000542877 SCN5AQ14524 2016 aa10.59□□□□□ -0.71
TNC-212ENST00000542877 INSP01308 110 aa10.59□□□□□ -0.71
TNC-212ENST00000542877 IGHV2-5P01817 119 aa10.59□□□□□ -0.71
TNC-212ENST00000542877 Q6ZS92 163 aa10.59□□□□□ -0.71
TNC-212ENST00000542877 NEGR1Q7Z3B1 354 aa10.59□□□□□ -0.71
TNC-212ENST00000542877 VGLL1Q99990 258 aa10.58□□□□□ -0.72
TNC-212ENST00000542877 DAZ1Q9NQZ3 744 aaKnown RBP10.58□□□□□ -0.72
TNC-212ENST00000542877 SAP30O75446 220 aa10.58□□□□□ -0.72
TNC-212ENST00000542877 COL8A2P25067 703 aa10.58□□□□□ -0.72
TNC-212ENST00000542877 PIP4P2Q8N4L2 257 aa10.58□□□□□ -0.72
TNC-212ENST00000542877 PLXNA3P51805 1871 aa10.58□□□□□ -0.72
TNC-212ENST00000542877 IGHV2-70P01814 119 aa10.58□□□□□ -0.72
TNC-212ENST00000542877 ARTNQ5T4W7 220 aa10.58□□□□□ -0.72
TNC-212ENST00000542877 TRPT1Q86TN4 253 aaKnown RBP10.58□□□□□ -0.72
TNC-212ENST00000542877 CYYR1Q96J86 154 aa10.58□□□□□ -0.72
TNC-212ENST00000542877 A0A1B0GUS0 222 aa10.58□□□□□ -0.72
TNC-212ENST00000542877 DEFB104AQ8WTQ1 72 aa10.58□□□□□ -0.72
TNC-212ENST00000542877 C1orf159Q96HA4 380 aa10.58□□□□□ -0.72
TNC-212ENST00000542877 SBF1O95248 1867 aa10.58□□□□□ -0.72
TNC-212ENST00000542877 ZSWIM8A7E2V4 1837 aa10.57□□□□□ -0.72
TNC-212ENST00000542877 TMEM213A2RRL7 107 aa10.57□□□□□ -0.72
TNC-212ENST00000542877 IGLC2P0DOY2 106 aa10.57□□□□□ -0.72
TNC-212ENST00000542877 IGLC3P0DOY3 106 aa10.57□□□□□ -0.72
TNC-212ENST00000542877 HIST1H4AP62805 103 aaKnown RBP10.57□□□□□ -0.72
TNC-212ENST00000542877 BRD3OSQ6XYD6 125 aa10.57□□□□□ -0.72
TNC-212ENST00000542877 Q8N8P6 123 aa10.57□□□□□ -0.72
TNC-212ENST00000542877 V9GYV3 84 aa10.57□□□□□ -0.72
TNC-212ENST00000542877 TRBV19A0A075B6N1 114 aa10.57□□□□□ -0.72
TNC-212ENST00000542877 A0A087WWL8 130 aa10.57□□□□□ -0.72
TNC-212ENST00000542877 GATA4P43694 442 aa10.57□□□□□ -0.72
TNC-212ENST00000542877 C6orf226Q5I0X4 101 aa10.57□□□□□ -0.72
TNC-212ENST00000542877 Q8TCH9 128 aa10.57□□□□□ -0.72
TNC-212ENST00000542877 CFHR2P36980 270 aa10.57□□□□□ -0.72
TNC-212ENST00000542877 C11orf44Q8N8P7 122 aa10.57□□□□□ -0.72
TNC-212ENST00000542877 FAM110DQ8TAY7 271 aaPredicted RBP10.57□□□□□ -0.72
TNC-212ENST00000542877 SPXQ9BT56 116 aa10.57□□□□□ -0.72
TNC-212ENST00000542877 C1QTNF4Q9BXJ3 329 aa10.57□□□□□ -0.72
TNC-212ENST00000542877 THADAQ6YHU6 1953 aa10.57□□□□□ -0.72
TNC-212ENST00000542877 TRAV8-3A0A0A6YYJ7 113 aa10.56□□□□□ -0.72
TNC-212ENST00000542877 IGKV1-39P01597 117 aa10.56□□□□□ -0.72
TNC-212ENST00000542877 IGKV1D-39P04432 117 aa10.56□□□□□ -0.72
TNC-212ENST00000542877 SPINK8P0C7L1 97 aa10.56□□□□□ -0.72
TNC-212ENST00000542877 ZNF833PQ6ZTB9 187 aa10.56□□□□□ -0.72
TNC-212ENST00000542877 DNAJC30Q96LL9 226 aa10.56□□□□□ -0.72
TNC-212ENST00000542877 LAMTOR3Q9UHA4 124 aa10.56□□□□□ -0.72
TNC-212ENST00000542877 KIAA2026Q5HYC2 2103 aa10.56□□□□□ -0.72
TNC-212ENST00000542877 PRIMA1Q86XR5 153 aa10.56□□□□□ -0.72
TNC-212ENST00000542877 TMEM141Q96I45 108 aa10.56□□□□□ -0.72
TNC-212ENST00000542877 SMIM27A0A1W2PRY6 76 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms