RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	ZGRF1	Q86YA3	2104 aa		10.21	□□□□□ -0.78
DDX11-223	ENST00000542838	KLK10	O43240	276 aa		10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	LOXL1	Q08397	574 aa	Predicted RBP	10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	COTL1	Q14019	142 aa		10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	LYPD1	Q8N2G4	141 aa		10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	RALY	Q9UKM9	306 aa	Known RBP	10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	PCNX1	Q96RV3	2341 aa		10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	CNOT1	A5YKK6	2376 aa	Known RBP	10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	TMSB15B	A0A087X1C1	80 aa		10.2	□□□□□ -0.78
DDX11-223	ENST00000542838		D6R8Y8	96 aa		10.2	□□□□□ -0.78
DDX11-223	ENST00000542838		K7EIM0	57 aa		10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	IL4	P05112	153 aa		10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	CT45A10	P0DMU9	189 aa		10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	FCGR2B	P31994	310 aa	Predicted RBP	10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	OCIAD2	Q56VL3	154 aa		10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	C7orf71	A4D174	169 aa		10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	PRRG2	O14669	202 aa		10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	TMEM97	Q5BJF2	176 aa		10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	ZNF491	Q8N8L2	437 aa		10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	RNF125	Q96EQ8	232 aa		10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	ZNF414	Q96IQ9	312 aa		10.2	□□□□□ -0.78
DDX11-223	ENST00000542838	VPS25	Q9BRG1	176 aa		10.2	□□□□□ -0.78
DDX11-223	ENST00000542838		A0A096LNJ9	63 aa		10.19	□□□□□ -0.78
DDX11-223	ENST00000542838	LYZL1	Q6UWQ5	148 aa		10.19	□□□□□ -0.78
DDX11-223	ENST00000542838	SIGLEC8	Q9NYZ4	499 aa		10.19	□□□□□ -0.78
DDX11-223	ENST00000542838	MAP1B	P46821	2468 aa	Known RBP	10.19	□□□□□ -0.78
DDX11-223	ENST00000542838	TMEM213	A2RRL7	107 aa		10.19	□□□□□ -0.78
DDX11-223	ENST00000542838	PPBP	P02775	128 aa		10.19	□□□□□ -0.78
DDX11-223	ENST00000542838	NHLH1	Q02575	133 aa		10.19	□□□□□ -0.78
DDX11-223	ENST00000542838	ZNF493	Q6ZR52	646 aa		10.19	□□□□□ -0.78
DDX11-223	ENST00000542838	PRELID3A	Q96N28	172 aa		10.19	□□□□□ -0.78
DDX11-223	ENST00000542838	EP300	Q09472	2414 aa	Predicted RBP	10.19	□□□□□ -0.78
DDX11-223	ENST00000542838		E7EQL1	145 aa		10.18	□□□□□ -0.78
DDX11-223	ENST00000542838	UQCRFS1	P47985	274 aa		10.18	□□□□□ -0.78
DDX11-223	ENST00000542838	AMN1	Q8IY45	258 aa		10.18	□□□□□ -0.78
DDX11-223	ENST00000542838	TMEM190	Q8WZ59	177 aa		10.18	□□□□□ -0.78
DDX11-223	ENST00000542838		S4R3C0	116 aa		10.18	□□□□□ -0.78
DDX11-223	ENST00000542838	TMEM189	A5PLL7	270 aa		10.18	□□□□□ -0.78
DDX11-223	ENST00000542838	SEC11A	P67812	179 aa		10.18	□□□□□ -0.78
DDX11-223	ENST00000542838	IGF2-AS	Q6U949	168 aa		10.18	□□□□□ -0.78
DDX11-223	ENST00000542838	GAGE12B	A1L429	117 aa		10.18	□□□□□ -0.78
DDX11-223	ENST00000542838	LYNX1	G3V0Z9	82 aa		10.18	□□□□□ -0.78
DDX11-223	ENST00000542838	MRPS12	O15235	138 aa	Known RBP	10.18	□□□□□ -0.78
DDX11-223	ENST00000542838	LYNX1	P0DP58	116 aa		10.18	□□□□□ -0.78
DDX11-223	ENST00000542838	TCTA	P57738	103 aa		10.18	□□□□□ -0.78
DDX11-223	ENST00000542838	FXYD7	P58549	80 aa		10.18	□□□□□ -0.78
DDX11-223	ENST00000542838	FAM104B	Q5XKR9	115 aa		10.18	□□□□□ -0.78
DDX11-223	ENST00000542838	PIP4P2	Q8N4L2	257 aa		10.18	□□□□□ -0.78
DDX11-223	ENST00000542838	AAMDC	Q9H7C9	122 aa		10.18	□□□□□ -0.78
DDX11-223	ENST00000542838	FGF6	P10767	208 aa		10.17	□□□□□ -0.78
DDX11-223	ENST00000542838	APOBEC3A	P31941	199 aa	Predicted RBP	10.17	□□□□□ -0.78
DDX11-223	ENST00000542838	PPIAL4C	A0A0B4J2A2	164 aa		10.17	□□□□□ -0.78
DDX11-223	ENST00000542838	SHISA9	B4DS77	424 aa		10.17	□□□□□ -0.78
DDX11-223	ENST00000542838	PPIAL4G	P0DN37	164 aa		10.17	□□□□□ -0.78
DDX11-223	ENST00000542838	CACNG7	P62955	275 aa		10.17	□□□□□ -0.78
DDX11-223	ENST00000542838	ORMDL3	Q8N138	153 aa		10.17	□□□□□ -0.78
DDX11-223	ENST00000542838	BCL6B	Q8N143	479 aa	Predicted RBP	10.17	□□□□□ -0.78
DDX11-223	ENST00000542838	DPF1	Q92782	380 aa		10.17	□□□□□ -0.78
DDX11-223	ENST00000542838	RABAC1	Q9UI14	185 aa		10.17	□□□□□ -0.78
DDX11-223	ENST00000542838	SH2D1A	O60880	128 aa		10.16	□□□□□ -0.78
DDX11-223	ENST00000542838	LGALS9B	Q3B8N2	356 aa		10.16	□□□□□ -0.78
DDX11-223	ENST00000542838	LGALS9C	Q6DKI2	356 aa		10.16	□□□□□ -0.78
DDX11-223	ENST00000542838	RNF5	Q99942	180 aa		10.16	□□□□□ -0.78
DDX11-223	ENST00000542838	SRSF8	Q9BRL6	282 aa	Known RBP	10.16	□□□□□ -0.78
DDX11-223	ENST00000542838	CACNA1H	O95180	2353 aa		10.16	□□□□□ -0.78
DDX11-223	ENST00000542838		A0A1W2PRD5	423 aa		10.16	□□□□□ -0.78
DDX11-223	ENST00000542838		A0A1W2PRF3	423 aa		10.16	□□□□□ -0.78
DDX11-223	ENST00000542838		A0A1W2PRM7	423 aa		10.16	□□□□□ -0.78
DDX11-223	ENST00000542838	KLF17	Q5JT82	389 aa	Predicted RBP	10.16	□□□□□ -0.78
DDX11-223	ENST00000542838	OR1N2	Q8NGR9	330 aa		10.16	□□□□□ -0.78
DDX11-223	ENST00000542838		U3KQK5	164 aa		10.16	□□□□□ -0.78
DDX11-223	ENST00000542838	WI2-2373I1.2	A0A1W2PRP0	233 aa		10.15	□□□□□ -0.78
DDX11-223	ENST00000542838	GAGE10	A6NGK3	116 aa		10.15	□□□□□ -0.78
DDX11-223	ENST00000542838	TIMM23	O14925	209 aa		10.15	□□□□□ -0.78
DDX11-223	ENST00000542838	GNG7	O60262	68 aa		10.15	□□□□□ -0.78
DDX11-223	ENST00000542838	MRPL51	Q4U2R6	128 aa	Known RBP	10.15	□□□□□ -0.78
DDX11-223	ENST00000542838	AP1S3	Q96PC3	154 aa		10.15	□□□□□ -0.78
DDX11-223	ENST00000542838	ARL6IP6	Q8N6S5	226 aa		10.15	□□□□□ -0.78
DDX11-223	ENST00000542838	OTOGL	Q3ZCN5	2332 aa		10.15	□□□□□ -0.78
DDX11-223	ENST00000542838	HBD	P02042	147 aa		10.15	□□□□□ -0.79
DDX11-223	ENST00000542838	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	10.14	□□□□□ -0.79
DDX11-223	ENST00000542838		A6NDN8	102 aa		10.14	□□□□□ -0.79
DDX11-223	ENST00000542838	IGKV2D-40	P01614	121 aa	Predicted RBP	10.14	□□□□□ -0.79
DDX11-223	ENST00000542838	PDE6H	Q13956	83 aa		10.14	□□□□□ -0.79
DDX11-223	ENST00000542838	BOD1L2	Q8IYS8	172 aa		10.14	□□□□□ -0.79
DDX11-223	ENST00000542838	SPOCK3	Q9BQ16	436 aa		10.14	□□□□□ -0.79
DDX11-223	ENST00000542838	THYN1	Q9P016	225 aa		10.14	□□□□□ -0.79
DDX11-223	ENST00000542838	JKAMP	Q9P055	326 aa		10.14	□□□□□ -0.79
DDX11-223	ENST00000542838	SMKR1	H3BMG3	65 aa		10.14	□□□□□ -0.79
DDX11-223	ENST00000542838	LY6L	H3BQJ8	138 aa		10.14	□□□□□ -0.79
DDX11-223	ENST00000542838		K7ERU9	68 aa		10.14	□□□□□ -0.79
DDX11-223	ENST00000542838	GFRAL	Q6UXV0	394 aa		10.14	□□□□□ -0.79
DDX11-223	ENST00000542838	S100A7A	Q86SG5	101 aa		10.14	□□□□□ -0.79
DDX11-223	ENST00000542838	RAB1B	Q9H0U4	201 aa		10.14	□□□□□ -0.79
DDX11-223	ENST00000542838	ONECUT1	Q9UBC0	465 aa		10.14	□□□□□ -0.79
DDX11-223	ENST00000542838	LAMA5	O15230	3695 aa		10.14	□□□□□ -0.79
DDX11-223	ENST00000542838	DCHS1	Q96JQ0	3298 aa		10.14	□□□□□ -0.79
DDX11-223	ENST00000542838	MGA	Q8IWI9	3026 aa		10.13	□□□□□ -0.79
DDX11-223	ENST00000542838	CKS2	P33552	79 aa		10.13	□□□□□ -0.79
DDX11-223	ENST00000542838	IFI27L1	Q96BM0	104 aa		10.13	□□□□□ -0.79

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