RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 DOPEY2Q9Y3R5 2298 aa2.61□□□□□ -1.99
SFSWAP-211ENST00000542813 ATMQ13315 3056 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 URB1O60287 2271 aaKnown RBP2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 A0A096LNJ9 63 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 TRAV38-1A0A0B4J264 116 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 A0A0J9YY10 115 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 A0A1B0GX78 115 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 TMEM189A5PLL7 270 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF727A8MUV8 499 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 KRTAP9-6A8MVA2 160 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF705FA8MVS1 300 aaPredicted RBP2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 CDC42EP2O14613 210 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 CCL16O15467 120 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 SRSF10O75494 262 aaKnown RBP2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 S1PR2O95136 353 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 CDS2O95674 445 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 IGKV3-15P01624 115 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 IGLV3-27P01718 113 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 CD3DP04234 171 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 CTSDP07339 412 aaPredicted RBP2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 IL3P08700 152 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 IGLC1P0CG04 106 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF705DP0CH99 300 aaPredicted RBP2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF705BP0CI00 300 aaPredicted RBP2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 AKAIN1P0CW23 69 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 HIST1H1EP10412 219 aaKnown RBP2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 CTSEP14091 401 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 CD34P28906 385 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 GABRA3P34903 492 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 CMC4P56277 68 aaPredicted RBP2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 TAS2R43P59537 309 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 NDPQ00604 133 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 ATP5G2Q06055 141 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 FOXF1Q12946 379 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 DHRS2Q13268 280 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 ENDOGQ14249 297 aaKnown RBP2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 MMDQ15546 238 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 LTC4SQ16873 150 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 ACOT6Q3I5F7 207 aaPredicted RBP2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 KRTAP21-3Q3LHN1 58 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 TRMT12Q53H54 448 aaKnown RBP2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 FAM222AQ5U5X8 452 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 OR8I2Q8N0Y5 310 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 TCTEX1D1Q8N7M0 179 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 OR51A2Q8NGJ7 313 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 OR2T27Q8NH04 317 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 CIRBP-AS1Q8TBR5 109 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 PPP1R1CQ8WVI7 109 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 PSMF1Q92530 271 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 GALMQ96C23 342 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 SLAMF6Q96DU3 332 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 TSPAN32Q96QS1 320 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 CST11Q9H112 138 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 TXNIPQ9H3M7 391 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 TAF9BQ9HBM6 251 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 MRPL16Q9NX20 251 aaKnown RBP2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF586Q9NXT0 402 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 TRAPPC2LQ9UL33 140 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 UFC1Q9Y3C8 167 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 RFNGQ9Y644 331 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 OTOGQ6ZRI0 2925 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 PLXNA2O75051 1894 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 MGAQ8IWI9 3026 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 SDK1Q7Z5N4 2213 aa2.6□□□□□ -1.99
SFSWAP-211ENST00000542813 DOCK6Q96HP0 2047 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 PCNX1Q96RV3 2341 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 CSMD1Q96PZ7 3565 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 COL5A1P20908 1838 aaPredicted RBP2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 IGKV1-6A0A0C4DH72 117 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 IGLC7A0M8Q6 106 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 CPSF4LA6NMK7 179 aaKnown RBP2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 A8MWL6 223 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 EEF1E1-BLOC1S5C9J1V9 151 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 H3BQ15 152 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 PANO1I0J062 215 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 HAND1O96004 215 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 IGKV1-39P01597 117 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 HBZP02008 142 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 IGKV1D-39P04432 117 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 SERPINA7P05543 415 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 GYPBP06028 91 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 SEC11BP0C7V7 166 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 IGLC2P0DOY2 106 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 IGLC3P0DOY3 106 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 RPS4Y1P22090 263 aaKnown RBP2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 ATP6V0CP27449 155 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 MP68P56378 58 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 TAS2R30P59541 319 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 BTN3A2P78410 334 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 SSBP1Q04837 148 aaKnown RBP2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 HSD52Q0P140 79 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 PLCXD2Q0VAA5 305 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 IL15RAQ13261 267 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 PDGFRLQ15198 375 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 IAH1Q2TAA2 248 aaPredicted RBP2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 TMEM128Q5BJH2 165 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 FAM78BQ5VT40 261 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 SPATA31B1PQ5VZV4 182 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 RPL7L1Q6DKI1 246 aaKnown RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms