RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 K7EIL1 84 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 GCGP01275 180 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 MBP02144 154 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 PRH1P02810 166 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 CTSDP07339 412 aaPredicted RBP4.06□□□□□ -1.76
CPSF7-220ENST00000541963 SFTA3P0C7M3 94 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 G6PCP35575 357 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 SULT1A2P50226 295 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 PPT1P50897 306 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 PIGPP57054 158 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 NUTF2P61970 127 aaKnown RBP4.06□□□□□ -1.76
CPSF7-220ENST00000541963 RANP62826 216 aaKnown RBP4.06□□□□□ -1.76
CPSF7-220ENST00000541963 ERHP84090 104 aaKnown RBP4.06□□□□□ -1.76
CPSF7-220ENST00000541963 KLF5Q13887 457 aaPredicted RBP4.06□□□□□ -1.76
CPSF7-220ENST00000541963 SURF2Q15527 256 aaPredicted RBP4.06□□□□□ -1.76
CPSF7-220ENST00000541963 C15orf32Q32M92 178 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 C10orf55Q5SWW7 151 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 SLC25A24Q6NUK1 477 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 LYG2Q86SG7 212 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 LHFPL1Q86WI0 220 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 OR9G4Q8NGQ1 327 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 OR5B3Q8NH48 314 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 PCNPQ8WW12 178 aaKnown RBP4.06□□□□□ -1.76
CPSF7-220ENST00000541963 LSM10Q969L4 123 aaKnown RBP4.06□□□□□ -1.76
CPSF7-220ENST00000541963 C14orf144Q96I85 54 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 HINT2Q9BX68 163 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 TMEM242Q9NWH2 141 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 CACFD1Q9UGQ2 172 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 TRAV14DV4A0A0A6YYC5 116 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 BORCS7-ASMTA0A0B4J1R7 106 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 TRAV3A0A0B4J244 114 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 SMCO3A2RU48 225 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 E7EUB6 86 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 REG1AP05451 166 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 SEC11BP0C7V7 166 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 OR13C7P0DN81 318 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 GP9P14770 177 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 AREGP15514 252 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 ADCYAP1P18509 176 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 SUB1P53999 127 aaKnown RBP eCLIP4.05□□□□□ -1.76
CPSF7-220ENST00000541963 SYNJ2BPP57105 145 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 HSPE1P61604 102 aaKnown RBP4.05□□□□□ -1.76
CPSF7-220ENST00000541963 KLK9Q2XQG4 91 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 ADAMTSL4-AS1Q5T5F5 129 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 PRSS54Q6PEW0 395 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 CLEC19AQ6UXS0 136 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 GPHB5Q86YW7 130 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 SGPP2Q8IWX5 399 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 OR4C16Q8NGL9 310 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 OR2K2Q8NGT1 345 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 VN1R17PQ8TDU5 208 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 PPP1R1CQ8WVI7 109 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 ATP6V0BQ99437 205 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 LITAFQ99732 161 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 ASCL2Q99929 193 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 B9D2Q9BPU9 175 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 ACTR3CQ9C0K3 210 aaPredicted RBP4.05□□□□□ -1.76
CPSF7-220ENST00000541963 ENY2Q9NPA8 101 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 RPS10P5Q9NQ39 176 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 NDUFA4L2Q9NRX3 87 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 SIGLEC8Q9NYZ4 499 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 KLK9Q9UKQ9 250 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 CHTOPQ9Y3Y2 248 aaKnown RBP4.05□□□□□ -1.76
CPSF7-220ENST00000541963 SMAD5-AS1Q9Y6J3 95 aa4.05□□□□□ -1.76
CPSF7-220ENST00000541963 MGAM2Q2M2H8 2515 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 IGLV11-55A0A075B6I3 123 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 IGLC7A0M8Q6 106 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 C7orf77A4D0Y5 90 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 UMAD1C9J7I0 102 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 M0R143 59 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 LGALS9O00182 355 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 IGLV1-51P01701 117 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 HLA-AP01891 365 aaKnown RBP4.04□□□□□ -1.76
CPSF7-220ENST00000541963 GPR183P32249 361 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 SNCAP37840 140 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 AKR1C2P52895 323 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 DHRS2Q13268 280 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 IQCJQ1A5X6 159 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 AKR1C8PQ5T2L2 129 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 LCN12Q6JVE5 192 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 DPPA3Q6W0C5 159 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 GTSCR1Q86UQ5 136 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 UBAC2Q8NBM4 344 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 OR10W1Q8NGF6 305 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 OR10G4Q8NGN3 311 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 OR13C8Q8NGS7 320 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 OR1P1Q8NH06 330 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 MARCH1Q8TCQ1 289 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 DYNLRB2Q8TF09 96 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 MRGPRFQ96AM1 343 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 GALNT14Q96FL9 552 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 SEC22AQ96IW7 307 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 SLC35B3Q9H1N7 401 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 PLEKHA3Q9HB20 300 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 SCRT2Q9NQ03 307 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 TMEM14BQ9NUH8 114 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 TECRQ9NZ01 308 aaKnown RBP4.04□□□□□ -1.76
CPSF7-220ENST00000541963 FLVCR2Q9UPI3 526 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 PYGO1Q9Y3Y4 419 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 F11RQ9Y624 299 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms