RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 RNF125Q96EQ8 232 aa10.71□□□□□ -0.7
PTPN1-202ENST00000541713 DPM3Q9P2X0 92 aa10.71□□□□□ -0.7
PTPN1-202ENST00000541713 IGLL1P15814 213 aa10.7□□□□□ -0.7
PTPN1-202ENST00000541713 ZNF596Q8TC21 504 aa10.7□□□□□ -0.7
PTPN1-202ENST00000541713 TRBV9A0A0B4J1U6 114 aa10.7□□□□□ -0.7
PTPN1-202ENST00000541713 FNDC10F2Z333 226 aa10.7□□□□□ -0.7
PTPN1-202ENST00000541713 FAM120AOSQ5T036 256 aa10.7□□□□□ -0.7
PTPN1-202ENST00000541713 BPIFA4PQ86YQ2 179 aa10.7□□□□□ -0.7
PTPN1-202ENST00000541713 THAP8Q8NA92 274 aa10.7□□□□□ -0.7
PTPN1-202ENST00000541713 LOC102724200A0A096LPH7 203 aaPredicted RBP10.7□□□□□ -0.7
PTPN1-202ENST00000541713 LEPROTL1O95214 131 aa10.7□□□□□ -0.7
PTPN1-202ENST00000541713 HLA-DRB1P01911 266 aa10.7□□□□□ -0.7
PTPN1-202ENST00000541713 GPR183P32249 361 aa10.7□□□□□ -0.7
PTPN1-202ENST00000541713 RNF182Q8N6D2 247 aa10.7□□□□□ -0.7
PTPN1-202ENST00000541713 PRSS3P2Q8NHM4 247 aa10.7□□□□□ -0.7
PTPN1-202ENST00000541713 TIMD4Q96H15 378 aa10.7□□□□□ -0.7
PTPN1-202ENST00000541713 TRGV9Q99603 122 aa10.7□□□□□ -0.7
PTPN1-202ENST00000541713 OR4C46A6NHA9 309 aa10.69□□□□□ -0.7
PTPN1-202ENST00000541713 K7EIM0 57 aa10.69□□□□□ -0.7
PTPN1-202ENST00000541713 NBR2O15453 112 aa10.69□□□□□ -0.7
PTPN1-202ENST00000541713 OR10J3Q5JRS4 329 aa10.69□□□□□ -0.7
PTPN1-202ENST00000541713 CBY3A6NI87 242 aa10.69□□□□□ -0.7
PTPN1-202ENST00000541713 NDUFB8O95169 186 aa10.69□□□□□ -0.7
PTPN1-202ENST00000541713 Q86TA4 180 aa10.69□□□□□ -0.7
PTPN1-202ENST00000541713 STXBP6Q8NFX7 210 aa10.69□□□□□ -0.7
PTPN1-202ENST00000541713 OR4B1Q8NGF8 309 aa10.69□□□□□ -0.7
PTPN1-202ENST00000541713 GOLT1BQ9Y3E0 138 aa10.69□□□□□ -0.7
PTPN1-202ENST00000541713 C2CD3Q4AC94 2353 aa10.69□□□□□ -0.7
PTPN1-202ENST00000541713 LINC01548A6NM66 108 aa10.68□□□□□ -0.7
PTPN1-202ENST00000541713 G3V318 75 aa10.68□□□□□ -0.7
PTPN1-202ENST00000541713 TNFRSF13BO14836 293 aaPredicted RBP10.68□□□□□ -0.7
PTPN1-202ENST00000541713 ERCC8Q13216 396 aa10.68□□□□□ -0.7
PTPN1-202ENST00000541713 VKORC1Q9BQB6 163 aa10.68□□□□□ -0.7
PTPN1-202ENST00000541713 PSG8Q9UQ74 426 aa10.68□□□□□ -0.7
PTPN1-202ENST00000541713 I3L2K1 104 aa10.68□□□□□ -0.7
PTPN1-202ENST00000541713 K7ENP7 123 aa10.68□□□□□ -0.7
PTPN1-202ENST00000541713 ORM1P02763 201 aa10.68□□□□□ -0.7
PTPN1-202ENST00000541713 IGLC2P0DOY2 106 aa10.68□□□□□ -0.7
PTPN1-202ENST00000541713 IGLC3P0DOY3 106 aa10.68□□□□□ -0.7
PTPN1-202ENST00000541713 OR4A5Q8NH83 315 aa10.68□□□□□ -0.7
PTPN1-202ENST00000541713 C18orf15Q96N68 181 aa10.68□□□□□ -0.7
PTPN1-202ENST00000541713 RAB1BQ9H0U4 201 aa10.68□□□□□ -0.7
PTPN1-202ENST00000541713 APOHP02749 345 aaPredicted RBP10.68□□□□□ -0.7
PTPN1-202ENST00000541713 CT45A10P0DMU9 189 aa10.68□□□□□ -0.7
PTPN1-202ENST00000541713 BTF3P20290 206 aaKnown RBP10.68□□□□□ -0.7
PTPN1-202ENST00000541713 ZFP36P26651 326 aaKnown RBP10.68□□□□□ -0.7
PTPN1-202ENST00000541713 URB1-AS1Q96HZ7 61 aa10.68□□□□□ -0.7
PTPN1-202ENST00000541713 NAA38Q9BRA0 125 aaKnown RBP10.68□□□□□ -0.7
PTPN1-202ENST00000541713 LAMTOR2Q9Y2Q5 125 aa10.68□□□□□ -0.7
PTPN1-202ENST00000541713 TRAV9-1A0A075B6T8 112 aa10.67□□□□□ -0.7
PTPN1-202ENST00000541713 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.67□□□□□ -0.7
PTPN1-202ENST00000541713 DEFB1P60022 68 aa10.67□□□□□ -0.7
PTPN1-202ENST00000541713 C3orf36Q3SXR2 165 aa10.67□□□□□ -0.7
PTPN1-202ENST00000541713 DNLZQ5SXM8 178 aa10.67□□□□□ -0.7
PTPN1-202ENST00000541713 RBPMS2Q6ZRY4 209 aaKnown RBP10.67□□□□□ -0.7
PTPN1-202ENST00000541713 VMO1Q7Z5L0 202 aa10.67□□□□□ -0.7
PTPN1-202ENST00000541713 LINC00311Q8N616 119 aa10.67□□□□□ -0.7
PTPN1-202ENST00000541713 CHRDL1Q9BU40 450 aa10.67□□□□□ -0.7
PTPN1-202ENST00000541713 RNF24Q9Y225 148 aa10.67□□□□□ -0.7
PTPN1-202ENST00000541713 AMN1Q8IY45 258 aa10.67□□□□□ -0.7
PTPN1-202ENST00000541713 ZNF491Q8N8L2 437 aa10.67□□□□□ -0.7
PTPN1-202ENST00000541713 A0A1W2PPR1 153 aa10.67□□□□□ -0.7
PTPN1-202ENST00000541713 ZNF785A8K8V0 405 aa10.67□□□□□ -0.7
PTPN1-202ENST00000541713 LOXL1Q08397 574 aaPredicted RBP10.67□□□□□ -0.7
PTPN1-202ENST00000541713 UQCR10Q9UDW1 63 aa10.67□□□□□ -0.7
PTPN1-202ENST00000541713 IGHV1-24A0A0C4DH33 117 aa10.66□□□□□ -0.7
PTPN1-202ENST00000541713 TOMM40O96008 361 aa10.66□□□□□ -0.7
PTPN1-202ENST00000541713 C20orf144Q9BQM9 153 aa10.66□□□□□ -0.7
PTPN1-202ENST00000541713 MSRB1Q9NZV6 116 aa10.66□□□□□ -0.7
PTPN1-202ENST00000541713 KAAG1Q9UBP8 84 aa10.66□□□□□ -0.7
PTPN1-202ENST00000541713 LINC00614P0C842 121 aa10.66□□□□□ -0.7
PTPN1-202ENST00000541713 UQCRFS1P47985 274 aa10.66□□□□□ -0.7
PTPN1-202ENST00000541713 ATP5IP56385 69 aaPredicted RBP10.66□□□□□ -0.7
PTPN1-202ENST00000541713 RELQ04864 619 aaPredicted RBP10.66□□□□□ -0.7
PTPN1-202ENST00000541713 TMEM70Q9BUB7 260 aa10.66□□□□□ -0.7
PTPN1-202ENST00000541713 SOX21Q9Y651 276 aaPredicted RBP10.66□□□□□ -0.7
PTPN1-202ENST00000541713 TMEM30BQ3MIR4 351 aa10.66□□□□□ -0.7
PTPN1-202ENST00000541713 LCNL1Q6ZST4 164 aa10.66□□□□□ -0.7
PTPN1-202ENST00000541713 FMC1Q96HJ9 113 aa10.66□□□□□ -0.7
PTPN1-202ENST00000541713 VGLL1Q99990 258 aa10.66□□□□□ -0.7
PTPN1-202ENST00000541713 AAMDCQ9H7C9 122 aa10.66□□□□□ -0.7
PTPN1-202ENST00000541713 JKAMPQ9P055 326 aa10.66□□□□□ -0.7
PTPN1-202ENST00000541713 CRYGCP07315 174 aa10.65□□□□□ -0.7
PTPN1-202ENST00000541713 EVI2AP22794 236 aa10.65□□□□□ -0.7
PTPN1-202ENST00000541713 RPL11P62913 178 aaKnown RBP10.65□□□□□ -0.7
PTPN1-202ENST00000541713 LYZL1Q6UWQ5 148 aa10.65□□□□□ -0.7
PTPN1-202ENST00000541713 BRD3OSQ6XYD6 125 aa10.65□□□□□ -0.7
PTPN1-202ENST00000541713 WFDC12Q8WWY7 111 aa10.65□□□□□ -0.7
PTPN1-202ENST00000541713 ARPC1AQ92747 370 aa10.65□□□□□ -0.7
PTPN1-202ENST00000541713 TRBV19A0A075B6N1 114 aa10.65□□□□□ -0.7
PTPN1-202ENST00000541713 LTAP01374 205 aa10.65□□□□□ -0.7
PTPN1-202ENST00000541713 MYCNOSP40205 109 aa10.65□□□□□ -0.7
PTPN1-202ENST00000541713 IFI27P40305 119 aaPredicted RBP10.65□□□□□ -0.7
PTPN1-202ENST00000541713 CRIP1P50238 77 aa10.65□□□□□ -0.7
PTPN1-202ENST00000541713 ADORA2A-AS1P86434 159 aa10.65□□□□□ -0.7
PTPN1-202ENST00000541713 TWIST1Q15672 202 aa10.65□□□□□ -0.7
PTPN1-202ENST00000541713 MPV17L2Q567V2 206 aa10.65□□□□□ -0.7
PTPN1-202ENST00000541713 Q6ZQT7 251 aa10.65□□□□□ -0.7
PTPN1-202ENST00000541713 C7orf69Q9H7B7 122 aa10.65□□□□□ -0.7
PTPN1-202ENST00000541713 C21orf62Q9NYP8 219 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms