RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 IGLV2-8P01709 118 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 P01737 135 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 COX6CP09669 75 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 GATA1P15976 413 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-218ENST00000541615 FKBP2P26885 142 aaKnown RBP4.11□□□□□ -1.75
SNHG1-218ENST00000541615 HERVK_113P61574 105 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 RPL18AQ02543 176 aaKnown RBP4.11□□□□□ -1.75
SNHG1-218ENST00000541615 CFHR1Q03591 330 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 PCOLCEQ15113 449 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 KHDC1LQ5JSQ8 128 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 PMS2CLQ68D20 193 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 ZNF818PQ6ZRF7 136 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 Q6ZRU5 148 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 NDUFA11Q86Y39 141 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 PRR15Q8IV56 129 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 LINC00311Q8N616 119 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 RNF182Q8N6D2 247 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 LINC01465Q8N7H1 131 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 NTN5Q8WTR8 489 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-218ENST00000541615 CYYR1Q96J86 154 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 S1PR3Q99500 378 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 ZNF355PQ9NSJ1 428 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 PRO1854Q9UHT4 67 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 HHLA3Q9XRX5 114 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 U3KQK5 164 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 PLXNA2O75051 1894 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 ANAPC1Q9H1A4 1944 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 SCN5AQ14524 2016 aa4.11□□□□□ -1.75
SNHG1-218ENST00000541615 TRBV19A0A075B6N1 114 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-218ENST00000541615 A0A0D9SEW6 157 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 A0A1B0GUT8 65 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 DDTLA6NHG4 134 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-218ENST00000541615 CGB1A6NKQ9 187 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 LMO7DNF2Z398 122 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 CCL16O15467 120 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 NDUFC1O43677 76 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 ELANEP08246 267 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 GLI4P10075 376 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 EDDM3BP56851 147 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 HILS1P60008 231 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 ERVK-16P61578 105 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 FAM104BQ5XKR9 115 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 Q6ZVL8 140 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 LINC00596Q86U02 117 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 ORMDL3Q8N138 153 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 C3orf56Q8N813 242 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 DCAF4L2Q8NA75 395 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 PRSS22Q9GZN4 317 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 CALYQ9NYX4 217 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 PEMTQ9UBM1 199 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 TAC3Q9UHF0 121 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 GREB1Q4ZG55 1949 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 MDC1Q14676 2089 aaKnown RBP4.1□□□□□ -1.75
SNHG1-218ENST00000541615 DOCK9Q9BZ29 2069 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 NUMA1Q14980 2115 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 MED12LQ86YW9 2145 aa4.1□□□□□ -1.75
SNHG1-218ENST00000541615 NUP210Q8TEM1 1887 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-218ENST00000541615 TRPM6Q9BX84 2022 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 IGKV1D-42A0A075B6H8 117 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 TRAV12-1A0A0B4J245 112 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 TRBV7-6A0A0J9YX20 115 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 C5orf63A6NC05 138 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 WISP2O76076 250 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 NXPH3O95157 252 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 PRSS1P07477 247 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 EMDP50402 254 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 SYNJ2BPP57105 145 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 TFF3Q07654 80 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 PAPPA-AS1Q5QFB9 102 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 FHL5Q5TD97 284 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 ZC2HC1BQ5TFG8 222 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 PCSK4Q6UW60 755 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 C2orf82Q6UX34 121 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 ZNF793Q6ZN11 406 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 SDIM1Q6ZPB5 146 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 VKORC1L1Q8N0U8 176 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 NEXN-AS1Q8NBZ9 246 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 BRK1Q8WUW1 75 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 OVCA2Q8WZ82 227 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 FMC1Q96HJ9 113 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 C16orf92Q96LL3 132 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 METTL26Q96S19 204 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 RNF181Q9P0P0 153 aa4.09□□□□□ -1.75
SNHG1-218ENST00000541615 KLK5Q9Y337 293 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-218ENST00000541615 COL4A1P02462 1669 aa4.09□□□□□ -1.76
SNHG1-218ENST00000541615 TMSB15BA0A087X1C1 80 aa4.08□□□□□ -1.76
SNHG1-218ENST00000541615 TRBV30A0A0K0K1B3 111 aa4.08□□□□□ -1.76
SNHG1-218ENST00000541615 TRBV6-1A0A0K0K1D8 114 aa4.08□□□□□ -1.76
SNHG1-218ENST00000541615 VWA8A3KMH1 1905 aa4.08□□□□□ -1.76
SNHG1-218ENST00000541615 LILRA5A6NI73 299 aa4.08□□□□□ -1.76
SNHG1-218ENST00000541615 LINC00473A8K010 186 aa4.08□□□□□ -1.76
SNHG1-218ENST00000541615 C16orf97H3BN30 126 aa4.08□□□□□ -1.76
SNHG1-218ENST00000541615 H3BTX0 84 aa4.08□□□□□ -1.76
SNHG1-218ENST00000541615 K7ESM1 405 aa4.08□□□□□ -1.76
SNHG1-218ENST00000541615 IGLV3-1P01715 115 aa4.08□□□□□ -1.76
SNHG1-218ENST00000541615 SLC25A16P16260 332 aa4.08□□□□□ -1.76
SNHG1-218ENST00000541615 IFI27P40305 119 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-218ENST00000541615 EFNA4P52798 201 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms