RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 MYOZ3Q8TDC0 251 aa9.61□□□□□ -0.87
SMAD3-204ENST00000540846 OR5B12Q96R08 314 aa9.61□□□□□ -0.87
SMAD3-204ENST00000540846 ATG101Q9BSB4 218 aa9.61□□□□□ -0.87
SMAD3-204ENST00000540846 KLK15Q9H2R5 256 aa9.61□□□□□ -0.87
SMAD3-204ENST00000540846 EPDR1Q9UM22 224 aa9.61□□□□□ -0.87
SMAD3-204ENST00000540846 KLF12Q9Y4X4 402 aa9.61□□□□□ -0.87
SMAD3-204ENST00000540846 C1orf196B1AJZ1 125 aa9.6□□□□□ -0.87
SMAD3-204ENST00000540846 H3BTX0 84 aa9.6□□□□□ -0.87
SMAD3-204ENST00000540846 IGLV2-8P01709 118 aa9.6□□□□□ -0.87
SMAD3-204ENST00000540846 S100PP25815 95 aa9.6□□□□□ -0.87
SMAD3-204ENST00000540846 PROK1P58294 105 aa9.6□□□□□ -0.87
SMAD3-204ENST00000540846 TPPP2P59282 170 aa9.6□□□□□ -0.87
SMAD3-204ENST00000540846 GNG5P63218 68 aa9.6□□□□□ -0.87
SMAD3-204ENST00000540846 RELQ04864 619 aaPredicted RBP9.6□□□□□ -0.87
SMAD3-204ENST00000540846 PDE6HQ13956 83 aa9.6□□□□□ -0.87
SMAD3-204ENST00000540846 LYPD1Q8N2G4 141 aa9.6□□□□□ -0.87
SMAD3-204ENST00000540846 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.6□□□□□ -0.87
SMAD3-204ENST00000540846 USMG5Q96IX5 58 aa9.6□□□□□ -0.87
SMAD3-204ENST00000540846 IMMP2LQ96T52 175 aa9.6□□□□□ -0.87
SMAD3-204ENST00000540846 PYGO2Q9BRQ0 406 aa9.6□□□□□ -0.87
SMAD3-204ENST00000540846 TMEM89A2RUT3 159 aa9.59□□□□□ -0.87
SMAD3-204ENST00000540846 RPL7P18124 248 aaKnown RBP9.59□□□□□ -0.87
SMAD3-204ENST00000540846 RAB5BP61020 215 aa9.59□□□□□ -0.87
SMAD3-204ENST00000540846 TMEM183BQ1AE95 376 aa9.59□□□□□ -0.87
SMAD3-204ENST00000540846 TCTEX1D4Q5JR98 221 aa9.59□□□□□ -0.87
SMAD3-204ENST00000540846 SIGLEC15Q6ZMC9 328 aa9.59□□□□□ -0.87
SMAD3-204ENST00000540846 LCNL1Q6ZST4 164 aa9.59□□□□□ -0.87
SMAD3-204ENST00000540846 OR10G8Q8NGN5 311 aa9.59□□□□□ -0.87
SMAD3-204ENST00000540846 FAM210BQ96KR6 192 aa9.59□□□□□ -0.87
SMAD3-204ENST00000540846 ISLRO14498 428 aa9.58□□□□□ -0.88
SMAD3-204ENST00000540846 GGCTO75223 188 aaKnown RBP9.58□□□□□ -0.88
SMAD3-204ENST00000540846 GCGP01275 180 aa9.58□□□□□ -0.88
SMAD3-204ENST00000540846 TCRAP04437 139 aa9.58□□□□□ -0.88
SMAD3-204ENST00000540846 S100A9P06702 114 aaKnown RBP9.58□□□□□ -0.88
SMAD3-204ENST00000540846 RAB9AP51151 201 aa9.58□□□□□ -0.88
SMAD3-204ENST00000540846 FOXE3Q13461 319 aa9.58□□□□□ -0.88
SMAD3-204ENST00000540846 KCNIP4Q6PIL6 250 aa9.58□□□□□ -0.88
SMAD3-204ENST00000540846 LURAP1LQ8IV03 231 aa9.58□□□□□ -0.88
SMAD3-204ENST00000540846 KLHDC1Q8N7A1 406 aa9.58□□□□□ -0.88
SMAD3-204ENST00000540846 SMIM12Q96EX1 92 aa9.58□□□□□ -0.88
SMAD3-204ENST00000540846 LINC00479Q96M42 142 aa9.58□□□□□ -0.88
SMAD3-204ENST00000540846 GNB4Q9HAV0 340 aa9.58□□□□□ -0.88
SMAD3-204ENST00000540846 IGHV3-35A0A0C4DH35 117 aa9.58□□□□□ -0.88
SMAD3-204ENST00000540846 CLPSL1A2RUU4 121 aa9.58□□□□□ -0.88
SMAD3-204ENST00000540846 SLC17A3O00476 420 aa9.58□□□□□ -0.88
SMAD3-204ENST00000540846 RPS10P46783 165 aaKnown RBP9.58□□□□□ -0.88
SMAD3-204ENST00000540846 FMC1Q96HJ9 113 aa9.58□□□□□ -0.88
SMAD3-204ENST00000540846 C17orf77Q96MU5 243 aa9.58□□□□□ -0.88
SMAD3-204ENST00000540846 OSTCQ9NRP0 149 aa9.58□□□□□ -0.88
SMAD3-204ENST00000540846 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.57□□□□□ -0.88
SMAD3-204ENST00000540846 TRAV34A0A0B4J273 112 aa9.57□□□□□ -0.88
SMAD3-204ENST00000540846 PPP5D1E7EU14 171 aa9.57□□□□□ -0.88
SMAD3-204ENST00000540846 ZNF253O75346 499 aa9.57□□□□□ -0.88
SMAD3-204ENST00000540846 ELANEP08246 267 aa9.57□□□□□ -0.88
SMAD3-204ENST00000540846 PF4V1P10720 104 aa9.57□□□□□ -0.88
SMAD3-204ENST00000540846 ARL3P36405 182 aa9.57□□□□□ -0.88
SMAD3-204ENST00000540846 UBE2G1P62253 170 aa9.57□□□□□ -0.88
SMAD3-204ENST00000540846 SLC35B1P78383 322 aa9.57□□□□□ -0.88
SMAD3-204ENST00000540846 FOXL1Q12952 345 aa9.57□□□□□ -0.88
SMAD3-204ENST00000540846 OR5I1Q13606 314 aa9.57□□□□□ -0.88
SMAD3-204ENST00000540846 KRTAP24-1Q3LI83 254 aa9.57□□□□□ -0.88
SMAD3-204ENST00000540846 BAGE2Q86Y30 109 aa9.57□□□□□ -0.88
SMAD3-204ENST00000540846 ZFP82Q8N141 532 aa9.57□□□□□ -0.88
SMAD3-204ENST00000540846 EXOC3-AS1Q8N2X6 119 aa9.57□□□□□ -0.88
SMAD3-204ENST00000540846 CMTM2Q8TAZ6 248 aa9.57□□□□□ -0.88
SMAD3-204ENST00000540846 RNF114Q9Y508 228 aa9.57□□□□□ -0.88
SMAD3-204ENST00000540846 A0A0G2JLM5 398 aa9.56□□□□□ -0.88
SMAD3-204ENST00000540846 TYMSP04818 313 aa9.56□□□□□ -0.88
SMAD3-204ENST00000540846 RPLP1P05386 114 aaKnown RBP9.56□□□□□ -0.88
SMAD3-204ENST00000540846 KRTAP10-3P60369 221 aa9.56□□□□□ -0.88
SMAD3-204ENST00000540846 ERVFC1-1P60608 527 aa9.56□□□□□ -0.88
SMAD3-204ENST00000540846 OR8I2Q8N0Y5 310 aa9.56□□□□□ -0.88
SMAD3-204ENST00000540846 BTF3L4Q96K17 158 aa9.56□□□□□ -0.88
SMAD3-204ENST00000540846 GPR82Q96P67 336 aa9.56□□□□□ -0.88
SMAD3-204ENST00000540846 RPH3ALQ9UNE2 315 aa9.56□□□□□ -0.88
SMAD3-204ENST00000540846 U3KQE9 123 aa9.56□□□□□ -0.88
SMAD3-204ENST00000540846 V9GYV3 84 aa9.56□□□□□ -0.88
SMAD3-204ENST00000540846 TRAV9-1A0A075B6T8 112 aa9.55□□□□□ -0.88
SMAD3-204ENST00000540846 IGHV3OR16-8A0A075B7F1 116 aa9.55□□□□□ -0.88
SMAD3-204ENST00000540846 A0A087X0K7 114 aa9.55□□□□□ -0.88
SMAD3-204ENST00000540846 TRBV6-1A0A0K0K1D8 114 aa9.55□□□□□ -0.88
SMAD3-204ENST00000540846 A0A1W2PPQ1 181 aa9.55□□□□□ -0.88
SMAD3-204ENST00000540846 BUB3O43684 328 aa9.55□□□□□ -0.88
SMAD3-204ENST00000540846 LTAP01374 205 aa9.55□□□□□ -0.88
SMAD3-204ENST00000540846 PSG9Q00887 426 aa9.55□□□□□ -0.88
SMAD3-204ENST00000540846 C1orf194Q5T5A4 169 aa9.55□□□□□ -0.88
SMAD3-204ENST00000540846 FAM231DQ6ZW35 169 aa9.55□□□□□ -0.88
SMAD3-204ENST00000540846 Q86TA4 180 aa9.55□□□□□ -0.88
SMAD3-204ENST00000540846 ARL6IP6Q8N6S5 226 aa9.55□□□□□ -0.88
SMAD3-204ENST00000540846 METTL26Q96S19 204 aa9.55□□□□□ -0.88
SMAD3-204ENST00000540846 SRD5A3Q9H8P0 318 aa9.55□□□□□ -0.88
SMAD3-204ENST00000540846 IL36BQ9NZH7 164 aa9.55□□□□□ -0.88
SMAD3-204ENST00000540846 NDUFA4O00483 81 aa9.54□□□□□ -0.88
SMAD3-204ENST00000540846 IGLV2-11P01706 119 aa9.54□□□□□ -0.88
SMAD3-204ENST00000540846 TRBV12-3P01733 135 aa9.54□□□□□ -0.88
SMAD3-204ENST00000540846 MGST1P10620 155 aaKnown RBP9.54□□□□□ -0.88
SMAD3-204ENST00000540846 FAM209BQ5JX69 171 aa9.54□□□□□ -0.88
SMAD3-204ENST00000540846 HIST2H2BDQ6DRA6 164 aa9.54□□□□□ -0.88
SMAD3-204ENST00000540846 GOLT1AQ6ZVE7 132 aa9.54□□□□□ -0.88
SMAD3-204ENST00000540846 NHLRC2Q8NBF2 726 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms