RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 OR4A16Q8NH70 328 aa5.19□□□□□ -1.58
YBX3-209ENST00000540747 METTL26Q96S19 204 aa5.19□□□□□ -1.58
YBX3-209ENST00000540747 ARV1Q9H2C2 271 aa5.19□□□□□ -1.58
YBX3-209ENST00000540747 SEPSECSQ9HD40 501 aaKnown RBP5.19□□□□□ -1.58
YBX3-209ENST00000540747 PLA2G2EQ9NZK7 142 aa5.19□□□□□ -1.58
YBX3-209ENST00000540747 TMEM56-RWDD3S4R434 201 aa5.19□□□□□ -1.58
YBX3-209ENST00000540747 IGLV2-18A0A075B6J9 118 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 FAM24AA6NFZ4 105 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 FAM90A26D6RGX4 464 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 IGLC1P0CG04 106 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 HLA-DRB4P13762 266 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 ERHP84090 104 aaKnown RBP5.18□□□□□ -1.58
YBX3-209ENST00000540747 SRSF3P84103 164 aaKnown RBP5.18□□□□□ -1.58
YBX3-209ENST00000540747 FLI1Q01543 452 aaPredicted RBP5.18□□□□□ -1.58
YBX3-209ENST00000540747 MLANAQ16655 118 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 SPINK9Q5DT21 86 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 PSMG4Q5JS54 123 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 SLC35G3Q8N808 338 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 OR4D5Q8NGN0 318 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 RNASE11Q8TAA1 199 aaKnown RBP5.18□□□□□ -1.58
YBX3-209ENST00000540747 IL22RA2Q969J5 263 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 TP53RKQ96S44 253 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 PBDC1Q9BVG4 233 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 C1QTNF4Q9BXJ3 329 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 WFDC1Q9HC57 220 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 XCL2Q9UBD3 114 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 DKK2Q9UBU2 259 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 CACFD1Q9UGQ2 172 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 PRELID1Q9Y255 219 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 HLA-DRB4X5D2U9 266 aa5.18□□□□□ -1.58
YBX3-209ENST00000540747 TMEM189A5PLL7 270 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 HELTA6NFD8 242 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 SMIM9A6NGZ8 99 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 CORTO00230 105 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 IFNA10P01566 189 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 SFTA3P0C7M3 94 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 SPART-AS1P0CW21 52 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 UCP1P25874 307 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 NPY1RP25929 384 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 RAB2AP61019 212 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 POLR2GP62487 172 aaKnown RBP eCLIP5.17□□□□□ -1.58
YBX3-209ENST00000540747 NHLH2Q02577 135 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 TNP2Q05952 138 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 ZNF266Q14584 549 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 USF2Q15853 346 aaPredicted RBP5.17□□□□□ -1.58
YBX3-209ENST00000540747 GUK1Q16774 197 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 TIGITQ495A1 244 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 SOHLH1Q5JUK2 328 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 C1orf134Q5TEV5 83 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 Q8N1X5 172 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 ZNF709Q8N972 641 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 HSD17B11Q8NBQ5 300 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 OR2G3Q8NGZ4 309 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 GNPNAT1Q96EK6 184 aaPredicted RBP5.17□□□□□ -1.58
YBX3-209ENST00000540747 CLUHP3Q96NS8 147 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 EIF5A2Q9GZV4 153 aaKnown RBP5.17□□□□□ -1.58
YBX3-209ENST00000540747 SMCO4Q9NRQ5 59 aa5.17□□□□□ -1.58
YBX3-209ENST00000540747 A0A0G2JRQ6 117 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 UMAD1C9J7I0 102 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 BUB3O43684 328 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 PITX3O75364 302 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 IFNA5P01569 189 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 IFNA17P01571 189 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 SLC25A6P12236 298 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 SNCAP37840 140 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 FAM3BP58499 235 aaPredicted RBP5.16□□□□□ -1.58
YBX3-209ENST00000540747 YPEL3P61236 119 aaPredicted RBP5.16□□□□□ -1.58
YBX3-209ENST00000540747 NUTF2P61970 127 aaKnown RBP5.16□□□□□ -1.58
YBX3-209ENST00000540747 ID3Q02535 119 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 CLINT1Q14677 625 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 GDF5OSQ5U4N7 250 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 TMEM88Q6PEY1 159 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 TMEM182Q6ZP80 229 aaPredicted RBP5.16□□□□□ -1.58
YBX3-209ENST00000540747 TMEM252Q8N6L7 170 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 MAPKAPK5-AS1Q8N8E1 139 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 LYPD6BQ8NI32 183 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 FAM213BQ8TBF2 198 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 SCGB1C1Q8TD33 95 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 TMEM170AQ8WVE7 144 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 GPR146Q96CH1 333 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 MAGT1Q9H0U3 335 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 NRN1Q9NPD7 142 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 BIN3Q9NQY0 253 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 RFNGQ9Y644 331 aa5.16□□□□□ -1.58
YBX3-209ENST00000540747 TRAV30A0A087WSZ9 112 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 TEX48A0A1B0GUV7 120 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 IGSF23A1L1A6 192 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 A8MTW9 85 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 C16orf90A8MZG2 172 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 M0R036 132 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 SOCS3O14543 225 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 SSSCA1O60232 199 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 NXPH3O95157 252 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 HBE1P02100 147 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 H2AFB1P0C5Y9 115 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 ADCYAP1P18509 176 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 OPRK1P41145 380 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 PPT1P50897 306 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 SUB1P53999 127 aaKnown RBP eCLIP5.15□□□□□ -1.59
YBX3-209ENST00000540747 DEFB1P60022 68 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms