RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 HIST1H1EP10412 219 aaKnown RBP7.9□□□□□ -1.14
VPS33A-204ENST00000540669 GCHFRP30047 84 aa7.9□□□□□ -1.14
VPS33A-204ENST00000540669 TAS2R45P59539 299 aa7.9□□□□□ -1.14
VPS33A-204ENST00000540669 BEAN1Q3B7T3 259 aa7.9□□□□□ -1.14
VPS33A-204ENST00000540669 CD300EQ496F6 205 aaPredicted RBP7.9□□□□□ -1.14
VPS33A-204ENST00000540669 KPRPQ5T749 579 aaPredicted RBP7.9□□□□□ -1.14
VPS33A-204ENST00000540669 TCF24Q7RTU0 167 aa7.9□□□□□ -1.14
VPS33A-204ENST00000540669 LRRC20Q8TCA0 184 aa7.9□□□□□ -1.14
VPS33A-204ENST00000540669 GRAMD2BQ96HH9 432 aa7.9□□□□□ -1.14
VPS33A-204ENST00000540669 NARS2Q96I59 477 aaKnown RBP7.9□□□□□ -1.14
VPS33A-204ENST00000540669 SPAG8Q99932 426 aaPredicted RBP7.9□□□□□ -1.14
VPS33A-204ENST00000540669 NRN1Q9NPD7 142 aa7.9□□□□□ -1.14
VPS33A-204ENST00000540669 ZNF586Q9NXT0 402 aa7.9□□□□□ -1.14
VPS33A-204ENST00000540669 ZNF785A8K8V0 405 aa7.89□□□□□ -1.15
VPS33A-204ENST00000540669 CXorf1O96002 111 aa7.89□□□□□ -1.15
VPS33A-204ENST00000540669 GALR1P47211 349 aa7.89□□□□□ -1.15
VPS33A-204ENST00000540669 GUK1Q16774 197 aa7.89□□□□□ -1.15
VPS33A-204ENST00000540669 LCN15Q6UWW0 184 aa7.89□□□□□ -1.15
VPS33A-204ENST00000540669 OR8I2Q8N0Y5 310 aa7.89□□□□□ -1.15
VPS33A-204ENST00000540669 FAM110AQ9BQ89 295 aa7.89□□□□□ -1.15
VPS33A-204ENST00000540669 PAXXQ9BUH6 204 aa7.89□□□□□ -1.15
VPS33A-204ENST00000540669 OR51M1Q9H341 326 aa7.89□□□□□ -1.15
VPS33A-204ENST00000540669 ZNF331Q9NQX6 463 aaPredicted RBP7.89□□□□□ -1.15
VPS33A-204ENST00000540669 C19orf73Q9NVV2 129 aa7.89□□□□□ -1.15
VPS33A-204ENST00000540669 UBQLN2Q9UHD9 624 aa7.89□□□□□ -1.15
VPS33A-204ENST00000540669 A0A1W2PPV4 95 aa7.88□□□□□ -1.15
VPS33A-204ENST00000540669 SAP30O75446 220 aa7.88□□□□□ -1.15
VPS33A-204ENST00000540669 H2AFB1P0C5Y9 115 aa7.88□□□□□ -1.15
VPS33A-204ENST00000540669 IGLL1P15814 213 aa7.88□□□□□ -1.15
VPS33A-204ENST00000540669 UBE2L3P68036 154 aaKnown RBP7.88□□□□□ -1.15
VPS33A-204ENST00000540669 DEFA6Q01524 100 aa7.88□□□□□ -1.15
VPS33A-204ENST00000540669 CLLU1Q5K131 121 aa7.88□□□□□ -1.15
VPS33A-204ENST00000540669 SAMD13Q5VXD3 122 aa7.88□□□□□ -1.15
VPS33A-204ENST00000540669 MS4A6AQ9H2W1 248 aa7.88□□□□□ -1.15
VPS33A-204ENST00000540669 TMEM167BQ9NRX6 74 aa7.88□□□□□ -1.15
VPS33A-204ENST00000540669 A8MTW9 85 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 ZNF705EA8MWA4 302 aaPredicted RBP7.87□□□□□ -1.15
VPS33A-204ENST00000540669 GGTLC3B5MD39 225 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 ISLRO14498 428 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 HMGB3O15347 200 aaKnown RBP7.87□□□□□ -1.15
VPS33A-204ENST00000540669 OR7C2O60412 319 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 NDUFS6O75380 124 aaKnown RBP7.87□□□□□ -1.15
VPS33A-204ENST00000540669 OR10J4P0C629 311 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 NBEAP1P0C6P0 100 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 PSMB3P49720 205 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 BLOC1S1P78537 153 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 CCL20P78556 96 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 ODF3L2Q3SX64 289 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 LCN12Q6JVE5 192 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 CCDC28AQ8IWP9 274 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 LYPD1Q8N2G4 141 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 FAM24BQ8N5W8 94 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 ARL6IP6Q8N6S5 226 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 DYNLRB2Q8TF09 96 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 MRPL53Q96EL3 112 aaKnown RBP7.87□□□□□ -1.15
VPS33A-204ENST00000540669 SLC50A1Q9BRV3 221 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 TMPRSS5Q9H3S3 457 aa7.87□□□□□ -1.15
VPS33A-204ENST00000540669 PRKDCP78527 4128 aaKnown RBP7.87□□□□□ -1.15
VPS33A-204ENST00000540669 A0A1W2PRE2 83 aa7.86□□□□□ -1.15
VPS33A-204ENST00000540669 HBE1P02100 147 aa7.86□□□□□ -1.15
VPS33A-204ENST00000540669 FGF8P55075 233 aaPredicted RBP7.86□□□□□ -1.15
VPS33A-204ENST00000540669 SFT2D1Q8WV19 159 aa7.86□□□□□ -1.15
VPS33A-204ENST00000540669 YTHDF2Q9Y5A9 579 aaKnown RBP7.86□□□□□ -1.15
VPS33A-204ENST00000540669 OR4C46A6NHA9 309 aa7.85□□□□□ -1.15
VPS33A-204ENST00000540669 FAM74A7A6NL05 159 aa7.85□□□□□ -1.15
VPS33A-204ENST00000540669 G3V4G9 280 aa7.85□□□□□ -1.15
VPS33A-204ENST00000540669 ATF4P18848 351 aaPredicted RBP7.85□□□□□ -1.15
VPS33A-204ENST00000540669 C20orf173Q96LM9 149 aa7.85□□□□□ -1.15
VPS33A-204ENST00000540669 MAP6D1Q9H9H5 199 aa7.85□□□□□ -1.15
VPS33A-204ENST00000540669 MED9Q9NWA0 146 aa7.85□□□□□ -1.15
VPS33A-204ENST00000540669 CLEC5AQ9NY25 188 aa7.85□□□□□ -1.15
VPS33A-204ENST00000540669 SELENOKQ9Y6D0 94 aa7.85□□□□□ -1.15
VPS33A-204ENST00000540669 DNAH9Q9NYC9 4486 aa7.84□□□□□ -1.15
VPS33A-204ENST00000540669 H3BTX0 84 aa7.84□□□□□ -1.15
VPS33A-204ENST00000540669 BCL2P10415 239 aa7.84□□□□□ -1.15
VPS33A-204ENST00000540669 PPT1P50897 306 aa7.84□□□□□ -1.15
VPS33A-204ENST00000540669 KRTAP10-11P60412 298 aa7.84□□□□□ -1.15
VPS33A-204ENST00000540669 Q8N1Y9 231 aa7.84□□□□□ -1.15
VPS33A-204ENST00000540669 C11orf52Q96A22 123 aa7.84□□□□□ -1.15
VPS33A-204ENST00000540669 TCEAL7Q9BRU2 100 aa7.84□□□□□ -1.15
VPS33A-204ENST00000540669 MANBALQ9NQG1 85 aa7.84□□□□□ -1.15
VPS33A-204ENST00000540669 OTORQ9NRC9 128 aa7.84□□□□□ -1.15
VPS33A-204ENST00000540669 LOC102723971A0A1B0GUV8 181 aa7.83□□□□□ -1.16
VPS33A-204ENST00000540669 M0R3E3 92 aa7.83□□□□□ -1.16
VPS33A-204ENST00000540669 HLA-DMBP28068 263 aa7.83□□□□□ -1.16
VPS33A-204ENST00000540669 LCE2AQ5TA79 106 aaPredicted RBP7.83□□□□□ -1.16
VPS33A-204ENST00000540669 RBPMS2Q6ZRY4 209 aaKnown RBP7.83□□□□□ -1.16
VPS33A-204ENST00000540669 MRAPQ8TCY5 172 aa7.83□□□□□ -1.16
VPS33A-204ENST00000540669 PCNPQ8WW12 178 aaKnown RBP7.83□□□□□ -1.16
VPS33A-204ENST00000540669 FAM210AQ96ND0 272 aa7.83□□□□□ -1.16
VPS33A-204ENST00000540669 CLUHP3Q96NS8 147 aa7.83□□□□□ -1.16
VPS33A-204ENST00000540669 Q9H3A6 140 aa7.83□□□□□ -1.16
VPS33A-204ENST00000540669 PRELID1Q9Y255 219 aa7.83□□□□□ -1.16
VPS33A-204ENST00000540669 AGRNO00468 2067 aa7.82□□□□□ -1.16
VPS33A-204ENST00000540669 TEX46H3BTG2 121 aa7.82□□□□□ -1.16
VPS33A-204ENST00000540669 SNRPCP09234 159 aaKnown RBP7.82□□□□□ -1.16
VPS33A-204ENST00000540669 TAGLN2P37802 199 aaKnown RBP7.82□□□□□ -1.16
VPS33A-204ENST00000540669 CD81P60033 236 aa7.82□□□□□ -1.16
VPS33A-204ENST00000540669 PSG9Q00887 426 aa7.82□□□□□ -1.16
VPS33A-204ENST00000540669 TNP2Q05952 138 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms