RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 FMC1Q96HJ9 113 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 URB1-AS1Q96HZ7 61 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 VPS25Q9BRG1 176 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 PAXXQ9BUH6 204 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 SLC25A2Q9BXI2 301 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 FAM234AQ9H0X4 552 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 RPP21Q9H633 154 aaKnown RBP6.12□□□□□ -1.43
CCDC60-204ENST00000539847 CALYQ9NYX4 217 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 WASHC3Q9Y3C0 194 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 CADP27708 2225 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 IGKV1OR2-108A0A075B7D4 117 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 IGHV3-43A0A0B4J1X8 118 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 GAGE12BA1L429 117 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 A6NDN8 102 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 CORTO00230 105 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 SPINK4O60575 86 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 FSTL3O95633 263 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 LHBP01229 141 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 IGLV1-44P01699 117 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 NBEAP1P0C6P0 100 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 IGHV3-43DP0DP04 118 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 SCGB1A1P11684 91 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 CEBPDP49716 269 aaPredicted RBP6.11□□□□□ -1.43
CCDC60-204ENST00000539847 ZNF134P52741 427 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 DSCR9P59020 149 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 LINC00205P59089 165 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 PLP1P60201 277 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 RPL8P62917 257 aaKnown RBP6.11□□□□□ -1.43
CCDC60-204ENST00000539847 UBE2L3P68036 154 aaKnown RBP6.11□□□□□ -1.43
CCDC60-204ENST00000539847 CT45A1Q5HYN5 189 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 AMMECR1LQ6DCA0 310 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 FAM53AQ6NSI3 398 aaPredicted RBP6.11□□□□□ -1.43
CCDC60-204ENST00000539847 UFSP1Q6NVU6 142 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 Q6ZT83 130 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 ZCCHC24Q8N2G6 241 aaKnown RBP6.11□□□□□ -1.43
CCDC60-204ENST00000539847 OR10AG1Q8NH19 301 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 CT45A3Q8NHU0 189 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 PIFOQ8TCI5 191 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 ZNF430Q9H8G1 570 aaPredicted RBP6.11□□□□□ -1.43
CCDC60-204ENST00000539847 NDUFA4L2Q9NRX3 87 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 ZNF355PQ9NSJ1 428 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 RNF24Q9Y225 148 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 PLCE1Q9P212 2302 aa6.11□□□□□ -1.43
CCDC60-204ENST00000539847 IGKV1D-17A0A075B6S4 117 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 LOC102724200A0A096LPH7 203 aaPredicted RBP6.1□□□□□ -1.43
CCDC60-204ENST00000539847 IGHV1-24A0A0C4DH33 117 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 TCRBV4S1A1TA0A5B7 111 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 C9orf118A6NHY6 69 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 B5MCH6 92 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 G3V4G9 280 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 TIMM8AO60220 97 aaPredicted RBP6.1□□□□□ -1.43
CCDC60-204ENST00000539847 COX7A2P2O60397 106 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 LTAP01374 205 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 IGHV1-2P23083 117 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 PSG9Q00887 426 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 C17orf58Q2M2W7 97 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 MAJINQ3KP22 176 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 RPL39P5Q59GN2 51 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 TMEM97Q5BJF2 176 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 LDLRAD2Q5SZI1 272 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 C10orf113Q5VZT2 155 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 Q6AWC8 147 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 ETFRF1Q6IPR1 90 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 ZNF826PQ6ZT77 177 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 SLC25A48Q6ZT89 311 aaKnown RBP6.1□□□□□ -1.43
CCDC60-204ENST00000539847 DTX2Q86UW9 622 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 ATOH7Q8N100 152 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 C8orf31Q8N9H6 132 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 C5orf17Q8NAS9 161 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 OR4X2Q8NGF9 303 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 OR5A1Q8NGJ0 315 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 OR9G4Q8NGQ1 327 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 VSTM2AQ8TAG5 236 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 LRRC29Q8WV35 223 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 NEU4Q8WWR8 484 aaPredicted RBP6.1□□□□□ -1.43
CCDC60-204ENST00000539847 FXYD5Q96DB9 178 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 PRR14LQ5THK1 2151 aa6.1□□□□□ -1.43
CCDC60-204ENST00000539847 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.09□□□□□ -1.43
CCDC60-204ENST00000539847 GAGE10A6NGK3 116 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 VWC2LB2RUY7 222 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 P01737 135 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 CRYGCP07315 174 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 CT45A10P0DMU9 189 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 PSG1P11464 419 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 CSN1S1P47710 185 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 SLC35B1P78383 322 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 LOXL1Q08397 574 aaPredicted RBP6.09□□□□□ -1.43
CCDC60-204ENST00000539847 RIGQ13278 110 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 PSG3Q16557 428 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 RNF151Q2KHN1 245 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 ZNF672Q499Z4 452 aaPredicted RBP6.09□□□□□ -1.43
CCDC60-204ENST00000539847 PRR31Q5SQ13 230 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 PDPNQ86YL7 162 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 BPIFA4PQ86YQ2 179 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 VKORC1L1Q8N0U8 176 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 FER1L6-AS1Q8NA97 138 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 OR10X1Q8NGY0 326 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 TMEM167AQ8TBQ9 72 aa6.09□□□□□ -1.43
CCDC60-204ENST00000539847 DAZAP1Q96EP5 407 aaKnown RBP6.09□□□□□ -1.43
CCDC60-204ENST00000539847 AJUBAQ96IF1 538 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms