RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 IGHV3-49A0A0A0MS15 119 aa17.3■□□□□ 0.36
HOMER3-204ENST00000539827 GGCTO75223 188 aaKnown RBP17.3■□□□□ 0.36
HOMER3-204ENST00000539827 APOHP02749 345 aaPredicted RBP17.3■□□□□ 0.36
HOMER3-204ENST00000539827 C10orf99Q6UWK7 81 aa17.3■□□□□ 0.36
HOMER3-204ENST00000539827 GOLT1AQ6ZVE7 132 aa17.3■□□□□ 0.36
HOMER3-204ENST00000539827 LYPD1Q8N2G4 141 aa17.3■□□□□ 0.36
HOMER3-204ENST00000539827 OR4X2Q8NGF9 303 aa17.3■□□□□ 0.36
HOMER3-204ENST00000539827 ZNF580Q9UK33 172 aa17.3■□□□□ 0.36
HOMER3-204ENST00000539827 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.29■□□□□ 0.36
HOMER3-204ENST00000539827 V9GYV3 84 aa17.29■□□□□ 0.36
HOMER3-204ENST00000539827 BUB3O43684 328 aa17.29■□□□□ 0.36
HOMER3-204ENST00000539827 FMC1Q96HJ9 113 aa17.29■□□□□ 0.36
HOMER3-204ENST00000539827 METTL26Q96S19 204 aa17.29■□□□□ 0.36
HOMER3-204ENST00000539827 PRSS22Q9GZN4 317 aa17.29■□□□□ 0.36
HOMER3-204ENST00000539827 TRAV8-1A0A0A6YYK1 113 aa17.28■□□□□ 0.36
HOMER3-204ENST00000539827 TRGC2P03986 189 aa17.28■□□□□ 0.36
HOMER3-204ENST00000539827 PDE6HQ13956 83 aa17.28■□□□□ 0.36
HOMER3-204ENST00000539827 IMMP2LQ96T52 175 aa17.28■□□□□ 0.36
HOMER3-204ENST00000539827 ZNF702PQ9H963 129 aa17.28■□□□□ 0.36
HOMER3-204ENST00000539827 OSTCQ9NRP0 149 aa17.28■□□□□ 0.36
HOMER3-204ENST00000539827 IL36BQ9NZH7 164 aa17.28■□□□□ 0.36
HOMER3-204ENST00000539827 A0A0G2JLM5 398 aa17.28■□□□□ 0.36
HOMER3-204ENST00000539827 M0R3E3 92 aa17.28■□□□□ 0.36
HOMER3-204ENST00000539827 PDZD2O15018 2839 aa17.27■□□□□ 0.36
HOMER3-204ENST00000539827 ITPR3Q14573 2671 aa17.27■□□□□ 0.36
HOMER3-204ENST00000539827 S100A12P80511 92 aa17.27■□□□□ 0.36
HOMER3-204ENST00000539827 IBA57Q5T440 356 aaKnown RBP17.27■□□□□ 0.36
HOMER3-204ENST00000539827 GPR82Q96P67 336 aa17.27■□□□□ 0.36
HOMER3-204ENST00000539827 TEX15Q9BXT5 2789 aa17.27■□□□□ 0.36
HOMER3-204ENST00000539827 ZNF785A8K8V0 405 aa17.26■□□□□ 0.35
HOMER3-204ENST00000539827 IGHG4P01861 327 aa17.26■□□□□ 0.35
HOMER3-204ENST00000539827 FOXL1Q12952 345 aa17.26■□□□□ 0.35
HOMER3-204ENST00000539827 PRR27Q6MZM9 219 aa17.26■□□□□ 0.35
HOMER3-204ENST00000539827 NPFFR1Q9GZQ6 430 aa17.26■□□□□ 0.35
HOMER3-204ENST00000539827 AAMDCQ9H7C9 122 aa17.26■□□□□ 0.35
HOMER3-204ENST00000539827 SRD5A3Q9H8P0 318 aa17.26■□□□□ 0.35
HOMER3-204ENST00000539827 SERTAD4Q9NUC0 356 aa17.26■□□□□ 0.35
HOMER3-204ENST00000539827 PSG9Q00887 426 aa17.26■□□□□ 0.35
HOMER3-204ENST00000539827 KRTAP1-1Q07627 177 aa17.26■□□□□ 0.35
HOMER3-204ENST00000539827 IGFL4Q6B9Z1 124 aa17.26■□□□□ 0.35
HOMER3-204ENST00000539827 UNQ9165/PRO28630Q6UXU0 137 aa17.26■□□□□ 0.35
HOMER3-204ENST00000539827 ZNF320A2RRD8 509 aa17.25■□□□□ 0.35
HOMER3-204ENST00000539827 LTAP01374 205 aa17.25■□□□□ 0.35
HOMER3-204ENST00000539827 HOXA5P20719 270 aa17.25■□□□□ 0.35
HOMER3-204ENST00000539827 PSMB8P28062 276 aa17.25■□□□□ 0.35
HOMER3-204ENST00000539827 PRNTQ86SH4 94 aa17.25■□□□□ 0.35
HOMER3-204ENST00000539827 DIRC3C9JPN6 131 aa17.24■□□□□ 0.35
HOMER3-204ENST00000539827 IGLV2-11P01706 119 aa17.24■□□□□ 0.35
HOMER3-204ENST00000539827 RPEL1Q2QD12 228 aa17.24■□□□□ 0.35
HOMER3-204ENST00000539827 Q86TA4 180 aa17.24■□□□□ 0.35
HOMER3-204ENST00000539827 ASCL2Q99929 193 aa17.24■□□□□ 0.35
HOMER3-204ENST00000539827 U3KQE9 123 aa17.24■□□□□ 0.35
HOMER3-204ENST00000539827 CCDC168Q8NDH2 2452 aa17.24■□□□□ 0.35
HOMER3-204ENST00000539827 NDUFA4O00483 81 aa17.24■□□□□ 0.35
HOMER3-204ENST00000539827 HLA-DMBP28068 263 aa17.24■□□□□ 0.35
HOMER3-204ENST00000539827 Q71RC1 249 aaPredicted RBP17.24■□□□□ 0.35
HOMER3-204ENST00000539827 BTF3L4Q96K17 158 aa17.24■□□□□ 0.35
HOMER3-204ENST00000539827 YAE1D1Q9NRH1 226 aa17.24■□□□□ 0.35
HOMER3-204ENST00000539827 SETXQ7Z333 2677 aaKnown RBP17.23■□□□□ 0.35
HOMER3-204ENST00000539827 ZNF705GA8MUZ8 300 aaPredicted RBP17.23■□□□□ 0.35
HOMER3-204ENST00000539827 HIST1H2BKO60814 126 aa17.23■□□□□ 0.35
HOMER3-204ENST00000539827 HIST1H2BJP06899 126 aa17.23■□□□□ 0.35
HOMER3-204ENST00000539827 HIST1H2BOP23527 126 aa17.23■□□□□ 0.35
HOMER3-204ENST00000539827 HIST1H2BBP33778 126 aa17.23■□□□□ 0.35
HOMER3-204ENST00000539827 HIST1H2BDP58876 126 aa17.23■□□□□ 0.35
HOMER3-204ENST00000539827 HIST1H2BCP62807 126 aa17.23■□□□□ 0.35
HOMER3-204ENST00000539827 HIST2H2BEQ16778 126 aa17.23■□□□□ 0.35
HOMER3-204ENST00000539827 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.23■□□□□ 0.35
HOMER3-204ENST00000539827 TEX29Q8N6K0 151 aa17.23■□□□□ 0.35
HOMER3-204ENST00000539827 NUDT10Q8NFP7 164 aa17.23■□□□□ 0.35
HOMER3-204ENST00000539827 HIST1H2BHQ93079 126 aa17.23■□□□□ 0.35
HOMER3-204ENST00000539827 NUDT11Q96G61 164 aa17.23■□□□□ 0.35
HOMER3-204ENST00000539827 HIST1H2BNQ99877 126 aa17.23■□□□□ 0.35
HOMER3-204ENST00000539827 HIST1H2BMQ99879 126 aa17.23■□□□□ 0.35
HOMER3-204ENST00000539827 MLST8Q9BVC4 326 aa17.23■□□□□ 0.35
HOMER3-204ENST00000539827 ZNF469Q96JG9 3925 aaPredicted RBP17.23■□□□□ 0.35
HOMER3-204ENST00000539827 UNC79Q9P2D8 2635 aa17.22■□□□□ 0.35
HOMER3-204ENST00000539827 CDX1P47902 265 aaPredicted RBP17.22■□□□□ 0.35
HOMER3-204ENST00000539827 GATCO43716 136 aaKnown RBP17.22■□□□□ 0.35
HOMER3-204ENST00000539827 CD5LO43866 347 aa17.22■□□□□ 0.35
HOMER3-204ENST00000539827 NDUFA6P56556 154 aa17.22■□□□□ 0.35
HOMER3-204ENST00000539827 C1orf194Q5T5A4 169 aa17.22■□□□□ 0.35
HOMER3-204ENST00000539827 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.22■□□□□ 0.35
HOMER3-204ENST00000539827 TMEM190Q8WZ59 177 aa17.22■□□□□ 0.35
HOMER3-204ENST00000539827 FRZBQ92765 325 aa17.22■□□□□ 0.35
HOMER3-204ENST00000539827 ITPR2Q14571 2701 aa17.21■□□□□ 0.35
HOMER3-204ENST00000539827 A0A087X0K7 114 aa17.21■□□□□ 0.35
HOMER3-204ENST00000539827 PCP4L1A6NKN8 68 aa17.21■□□□□ 0.35
HOMER3-204ENST00000539827 CA1P00915 261 aaPredicted RBP17.21■□□□□ 0.35
HOMER3-204ENST00000539827 TYMSP04818 313 aa17.21■□□□□ 0.35
HOMER3-204ENST00000539827 CSN1S1P47710 185 aa17.21■□□□□ 0.35
HOMER3-204ENST00000539827 FAM231DQ6ZW35 169 aa17.21■□□□□ 0.35
HOMER3-204ENST00000539827 TMEM75Q8N9X5 138 aa17.21■□□□□ 0.35
HOMER3-204ENST00000539827 SMIM12Q96EX1 92 aa17.21■□□□□ 0.35
HOMER3-204ENST00000539827 ZNF331Q9NQX6 463 aaPredicted RBP17.21■□□□□ 0.35
HOMER3-204ENST00000539827 PEF1Q9UBV8 284 aaKnown RBP17.21■□□□□ 0.35
HOMER3-204ENST00000539827 PSG8Q9UQ74 426 aa17.21■□□□□ 0.35
HOMER3-204ENST00000539827 K7EQM0 130 aa17.2■□□□□ 0.34
HOMER3-204ENST00000539827 RPLP1P05386 114 aaKnown RBP17.2■□□□□ 0.34
HOMER3-204ENST00000539827 TCL1AP56279 114 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms