RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 COL4A6Q14031 1691 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 COL8A2P25067 703 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 ZNF474Q6S9Z5 364 aaPredicted RBP5.27□□□□□ -1.57
LSAMP-207ENST00000539563 CRIM1Q9NZV1 1036 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 UBE2E1P51965 193 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 WNK2Q9Y3S1 2297 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 TRGV1A0A0A0MS02 117 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 ZNF562Q6V9R5 426 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 ZNF329Q86UD4 541 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 RPL35AP18077 110 aaKnown RBP5.27□□□□□ -1.57
LSAMP-207ENST00000539563 FAM90A2PQ658T7 463 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 BPESC1Q9GZL8 116 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 TMEM14BQ9NUH8 114 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 POLEQ07864 2286 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 COLCA2A8K830 154 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 LGALS1P09382 135 aaKnown RBP5.27□□□□□ -1.57
LSAMP-207ENST00000539563 SS18Q15532 418 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 CSTL1Q9H114 145 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 MSMBP08118 114 aa5.26□□□□□ -1.57
LSAMP-207ENST00000539563 JPT2Q9H910 190 aa5.26□□□□□ -1.57
LSAMP-207ENST00000539563 DAZ1Q9NQZ3 744 aaKnown RBP5.26□□□□□ -1.57
LSAMP-207ENST00000539563 NDPQ00604 133 aa5.26□□□□□ -1.57
LSAMP-207ENST00000539563 TMEM249Q2WGJ8 235 aa5.26□□□□□ -1.57
LSAMP-207ENST00000539563 CD300EQ496F6 205 aaPredicted RBP5.26□□□□□ -1.57
LSAMP-207ENST00000539563 GAGE13Q4V321 117 aa5.26□□□□□ -1.57
LSAMP-207ENST00000539563 CST9LQ9H4G1 147 aa5.26□□□□□ -1.57
LSAMP-207ENST00000539563 CDK2AP2O75956 126 aa5.26□□□□□ -1.57
LSAMP-207ENST00000539563 PCP4P48539 62 aa5.26□□□□□ -1.57
LSAMP-207ENST00000539563 BRD3OSQ6XYD6 125 aa5.26□□□□□ -1.57
LSAMP-207ENST00000539563 TRPT1Q86TN4 253 aaKnown RBP5.26□□□□□ -1.57
LSAMP-207ENST00000539563 Q8TCH9 128 aa5.26□□□□□ -1.57
LSAMP-207ENST00000539563 DNAJC30Q96LL9 226 aa5.26□□□□□ -1.57
LSAMP-207ENST00000539563 HGFACQ04756 655 aa5.26□□□□□ -1.57
LSAMP-207ENST00000539563 ZNF833PQ6ZTB9 187 aa5.26□□□□□ -1.57
LSAMP-207ENST00000539563 ZNF479Q96JC4 524 aa5.26□□□□□ -1.57
LSAMP-207ENST00000539563 IGHV3-64A0A075B6Q5 118 aa5.26□□□□□ -1.57
LSAMP-207ENST00000539563 LHFPL4Q7Z7J7 247 aa5.26□□□□□ -1.57
LSAMP-207ENST00000539563 SIGMAR1Q99720 223 aa5.26□□□□□ -1.57
LSAMP-207ENST00000539563 C5orf63A6NC05 138 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 J3QLI3 93 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 LEPROTO15243 131 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 C1orf194Q5T5A4 169 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 IGFL3Q6UXB1 125 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 FXYD7P58549 80 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 GATD1Q8NB37 220 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 KLHDC3Q9BQ90 382 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 SHANK2-AS3Q9BTD1 123 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 RHPN1-AS1Q9BWJ2 59 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 ZNF106Q9H2Y7 1883 aaKnown RBP5.25□□□□□ -1.57
LSAMP-207ENST00000539563 GATA4P43694 442 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 LSM4Q9Y4Z0 139 aaKnown RBP5.25□□□□□ -1.57
LSAMP-207ENST00000539563 TNRC6AQ8NDV7 1962 aaKnown RBP5.25□□□□□ -1.57
LSAMP-207ENST00000539563 MYMXA0A1B0GTQ4 84 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 MRPL52Q86TS9 123 aaKnown RBP5.25□□□□□ -1.57
LSAMP-207ENST00000539563 PAX4O43316 350 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 NCR2O95944 276 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 YPEL3P61236 119 aaPredicted RBP5.25□□□□□ -1.57
LSAMP-207ENST00000539563 FAM110DQ8TAY7 271 aaPredicted RBP5.25□□□□□ -1.57
LSAMP-207ENST00000539563 LAMA2P24043 3122 aaKnown RBP5.25□□□□□ -1.57
LSAMP-207ENST00000539563 A0A1W2PPI3 338 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 C6orf226Q5I0X4 101 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 REG4Q9BYZ8 158 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 ZDBF2Q9HCK1 2354 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 PSCAO43653 123 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 SP5Q6BEB4 398 aaPredicted RBP5.25□□□□□ -1.57
LSAMP-207ENST00000539563 TMEM158Q8WZ71 300 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 LIME1Q9H400 295 aa5.25□□□□□ -1.57
LSAMP-207ENST00000539563 IGHV3-73A0A0B4J1V6 119 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 IL17RELQ6ZVW7 336 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 IGHV1-69DA0A0B4J2H0 117 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 SYS1-DBNDD2H3BUS1 97 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 RHODO00212 210 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 IGHV1-69P01742 117 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 KLF17Q5JT82 389 aaPredicted RBP5.24□□□□□ -1.57
LSAMP-207ENST00000539563 MEGF9Q9H1U4 602 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 ZNF492Q9P255 531 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 FAM231BA6NCW3 169 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 A6NNC1 897 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 ETV2O00321 342 aaPredicted RBP5.24□□□□□ -1.57
LSAMP-207ENST00000539563 LINC00311Q8N616 119 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 DOCK10Q96BY6 2186 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 NDUFA4L2Q9NRX3 87 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 IGHV2-70DA0A0C4DH43 119 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 LINC01619G3V211 115 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 IGKV1-16P04430 117 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 CT83Q5H943 113 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 CEP250Q9BV73 2442 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 SPTBN1Q01082 2364 aaKnown RBP5.24□□□□□ -1.57
LSAMP-207ENST00000539563 ANAPC10Q9UM13 185 aa5.24□□□□□ -1.57
LSAMP-207ENST00000539563 A0A0G2JRQ6 117 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 DEFB121Q5J5C9 76 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 BCL6BQ8N143 479 aaPredicted RBP5.23□□□□□ -1.57
LSAMP-207ENST00000539563 DLX4Q92988 240 aaPredicted RBP5.23□□□□□ -1.57
LSAMP-207ENST00000539563 Q86TA4 180 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 Q8TAT8 98 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 UBE2E2Q96LR5 201 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 CACNA1EQ15878 2313 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 GUSBP1Q15486 140 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 TEX36Q5VZQ5 186 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 C14orf178Q8N769 122 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms