RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 TFPI2P48307 235 aa8.13□□□□□ -1.11
TNFRSF1A-211ENST00000538363 MEOX2P50222 304 aa8.13□□□□□ -1.11
TNFRSF1A-211ENST00000538363 RXFP4Q8TDU9 374 aa8.13□□□□□ -1.11
TNFRSF1A-211ENST00000538363 C16orf92Q96LL3 132 aa8.13□□□□□ -1.11
TNFRSF1A-211ENST00000538363 CITED4Q96RK1 184 aa8.13□□□□□ -1.11
TNFRSF1A-211ENST00000538363 CITED1Q99966 193 aa8.13□□□□□ -1.11
TNFRSF1A-211ENST00000538363 VAX2Q9UIW0 290 aa8.13□□□□□ -1.11
TNFRSF1A-211ENST00000538363 RPH3ALQ9UNE2 315 aa8.13□□□□□ -1.11
TNFRSF1A-211ENST00000538363 ATRQ13535 2644 aa8.12□□□□□ -1.11
TNFRSF1A-211ENST00000538363 TMEM213A2RRL7 107 aa8.12□□□□□ -1.11
TNFRSF1A-211ENST00000538363 PGPA6NDG6 321 aa8.12□□□□□ -1.11
TNFRSF1A-211ENST00000538363 A8MWP6 167 aa8.12□□□□□ -1.11
TNFRSF1A-211ENST00000538363 C11orf94C9JXX5 98 aa8.12□□□□□ -1.11
TNFRSF1A-211ENST00000538363 GBGT1Q8N5D6 347 aa8.12□□□□□ -1.11
TNFRSF1A-211ENST00000538363 FAM167A-AS1Q96KT0 104 aa8.12□□□□□ -1.11
TNFRSF1A-211ENST00000538363 NKX6-2Q9C056 277 aaPredicted RBP8.12□□□□□ -1.11
TNFRSF1A-211ENST00000538363 RAB19A4D1S5 217 aa8.11□□□□□ -1.11
TNFRSF1A-211ENST00000538363 LINC00862A6NCI5 91 aa8.11□□□□□ -1.11
TNFRSF1A-211ENST00000538363 K7EQM0 130 aa8.11□□□□□ -1.11
TNFRSF1A-211ENST00000538363 SLC25A5P05141 298 aaKnown RBP8.11□□□□□ -1.11
TNFRSF1A-211ENST00000538363 BCL2P10415 239 aa8.11□□□□□ -1.11
TNFRSF1A-211ENST00000538363 GP9P14770 177 aa8.11□□□□□ -1.11
TNFRSF1A-211ENST00000538363 SUMO1P63165 101 aaKnown RBP8.11□□□□□ -1.11
TNFRSF1A-211ENST00000538363 GUCA2BQ16661 112 aa8.11□□□□□ -1.11
TNFRSF1A-211ENST00000538363 FXYD5Q96DB9 178 aa8.11□□□□□ -1.11
TNFRSF1A-211ENST00000538363 LINC00052Q96N35 136 aa8.11□□□□□ -1.11
TNFRSF1A-211ENST00000538363 FAM210AQ96ND0 272 aa8.11□□□□□ -1.11
TNFRSF1A-211ENST00000538363 TXNDC17Q9BRA2 123 aa8.11□□□□□ -1.11
TNFRSF1A-211ENST00000538363 ZNF586Q9NXT0 402 aa8.11□□□□□ -1.11
TNFRSF1A-211ENST00000538363 U3KQE9 123 aa8.11□□□□□ -1.11
TNFRSF1A-211ENST00000538363 TRBV19A0A075B6N1 114 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 LOC102723971A0A1B0GUV8 181 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 A0A1W2PRE2 83 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 ADARB2-AS1A8MUL3 147 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 CSN3P07498 182 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 MEF2BQ02080 365 aaPredicted RBP8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 TNP2Q05952 138 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 FHL3Q13643 280 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 ICAM4Q14773 271 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 SAMD5Q5TGI4 173 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 SAMD13Q5VXD3 122 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 SLC7A5P1Q8MH63 180 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 GLMPQ8WWB7 406 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 ZNF414Q96IQ9 312 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 MDFIQ99750 246 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 RARRES2Q99969 163 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 SLC50A1Q9BRV3 221 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 MCRIP2Q9BUT9 160 aaKnown RBP8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 Q9H3A6 140 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 NRN1Q9NPD7 142 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 MED9Q9NWA0 146 aa8.1□□□□□ -1.11
TNFRSF1A-211ENST00000538363 COL6A5A8TX70 2615 aa8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 FAM74A7A6NL05 159 aa8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 H3BQ15 152 aa8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 PDE6DO43924 150 aa8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 EDN2P20800 178 aa8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 SNRPD3P62318 126 aaKnown RBP8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 PDE6HQ13956 83 aa8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 ZNF506Q5JVG8 444 aa8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 UQCC3Q6UW78 93 aa8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 LYPD1Q8N2G4 141 aa8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 ZNF738Q8NE65 137 aa8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 LYPD6BQ8NI32 183 aa8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 SUN5Q8TC36 379 aa8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 ZNF503Q96F45 646 aa8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 C17orf77Q96MU5 243 aa8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 OTORQ9NRC9 128 aa8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 CLEC5AQ9NY25 188 aa8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 PRELID1Q9Y255 219 aa8.09□□□□□ -1.11
TNFRSF1A-211ENST00000538363 A0A087X0K7 114 aa8.08□□□□□ -1.12
TNFRSF1A-211ENST00000538363 IGLC2P0DOY2 106 aa8.08□□□□□ -1.12
TNFRSF1A-211ENST00000538363 AKR1C3P42330 323 aa8.08□□□□□ -1.12
TNFRSF1A-211ENST00000538363 ATP5G3P48201 142 aa8.08□□□□□ -1.12
TNFRSF1A-211ENST00000538363 ZNF674Q2M3X9 581 aa8.08□□□□□ -1.12
TNFRSF1A-211ENST00000538363 DEFB114Q30KQ6 69 aa8.08□□□□□ -1.12
TNFRSF1A-211ENST00000538363 C9orf66Q5T8R8 295 aa8.08□□□□□ -1.12
TNFRSF1A-211ENST00000538363 EXOC3-AS1Q8N2X6 119 aa8.08□□□□□ -1.12
TNFRSF1A-211ENST00000538363 SMDT1Q9H4I9 107 aa8.08□□□□□ -1.12
TNFRSF1A-211ENST00000538363 PPP1R14DQ9NXH3 145 aa8.08□□□□□ -1.12
TNFRSF1A-211ENST00000538363 MLXQ9UH92 298 aa8.08□□□□□ -1.12
TNFRSF1A-211ENST00000538363 YTHDF2Q9Y5A9 579 aaKnown RBP8.08□□□□□ -1.12
TNFRSF1A-211ENST00000538363 SMAD5-AS1Q9Y6J3 95 aa8.08□□□□□ -1.12
TNFRSF1A-211ENST00000538363 ARL2-SNX15V9GYD0 113 aa8.08□□□□□ -1.12
TNFRSF1A-211ENST00000538363 TRAV25A0A0B4J276 109 aa8.07□□□□□ -1.12
TNFRSF1A-211ENST00000538363 OR4C46A6NHA9 309 aa8.07□□□□□ -1.12
TNFRSF1A-211ENST00000538363 CNN1P51911 297 aaKnown RBP8.07□□□□□ -1.12
TNFRSF1A-211ENST00000538363 CMC4P56277 68 aaPredicted RBP8.07□□□□□ -1.12
TNFRSF1A-211ENST00000538363 UBE2G1P62253 170 aa8.07□□□□□ -1.12
TNFRSF1A-211ENST00000538363 PMS2P11Q13670 270 aa8.07□□□□□ -1.12
TNFRSF1A-211ENST00000538363 IGFL4Q6B9Z1 124 aa8.07□□□□□ -1.12
TNFRSF1A-211ENST00000538363 LCN12Q6JVE5 192 aa8.07□□□□□ -1.12
TNFRSF1A-211ENST00000538363 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.07□□□□□ -1.12
TNFRSF1A-211ENST00000538363 LINC00482Q8N8I6 264 aa8.07□□□□□ -1.12
TNFRSF1A-211ENST00000538363 C5orf17Q8NAS9 161 aa8.07□□□□□ -1.12
TNFRSF1A-211ENST00000538363 GPR61Q9BZJ8 451 aa8.07□□□□□ -1.12
TNFRSF1A-211ENST00000538363 SLC35B3Q9H1N7 401 aa8.07□□□□□ -1.12
TNFRSF1A-211ENST00000538363 MS4A6AQ9H2W1 248 aa8.07□□□□□ -1.12
TNFRSF1A-211ENST00000538363 F8W036 122 aa8.06□□□□□ -1.12
TNFRSF1A-211ENST00000538363 ISLRO14498 428 aa8.06□□□□□ -1.12
TNFRSF1A-211ENST00000538363 TSPAN4O14817 238 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms