RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 SMIM27A0A1W2PRY6 76 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 VWC2LB2RUY7 222 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 PPIFP30405 207 aaKnown RBP6.86□□□□□ -1.31
UBE3B-208ENST00000538070 FXYD7P58549 80 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 RPL11P62913 178 aaKnown RBP6.86□□□□□ -1.31
UBE3B-208ENST00000538070 ZNF491Q8N8L2 437 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 A8MWP6 167 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 CLEC3BP05452 202 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 CT45A10P0DMU9 189 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 TSKUQ8WUA8 353 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 WNK1Q9H4A3 2382 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 ABCA2Q9BZC7 2435 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 LY6LH3BQJ8 138 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 K7EQM0 130 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 FSTL3O95633 263 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 MT-ND6P03923 174 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 GPX1P07203 203 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 FAM106CPP0CH98 169 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 HOXB4P17483 251 aaPredicted RBP6.85□□□□□ -1.31
UBE3B-208ENST00000538070 CSN1S1P47710 185 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 C15orf32Q32M92 178 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 CCDC144NLQ6NUI1 221 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 MAPK1IP1LQ8NDC0 245 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 CFHR4Q92496 578 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 TXN2Q99757 166 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 ZFHX3Q15911 3703 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 PAFAH1B2P68402 229 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 CYB5R2Q6BCY4 276 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 LCNL1Q6ZST4 164 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 GTSF1Q8WW33 167 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 DOPEY1Q5JWR5 2465 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 TMEM8BA6NDV4 472 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 IGHV3-11P01762 117 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 RHOGP84095 191 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 FBXL19-AS1Q494R0 122 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 RNF182Q8N6D2 247 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 C18orf32Q8TCD1 76 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 ZC2HC1AQ96GY0 325 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 FANCD2OSQ96PS1 177 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 OTORQ9NRC9 128 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 THYN1Q9P016 225 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 PSG8Q9UQ74 426 aa6.85□□□□□ -1.31
UBE3B-208ENST00000538070 CUBNO60494 3623 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 NPIPB5A8MRT5 1133 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 ATP6V0E1O15342 81 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 ZNF324O75467 553 aaPredicted RBP6.84□□□□□ -1.31
UBE3B-208ENST00000538070 BTF3P20290 206 aaKnown RBP6.84□□□□□ -1.31
UBE3B-208ENST00000538070 HBBP68871 147 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 Q86TA4 180 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 TMEM75Q8N9X5 138 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 OR11H6Q8NGC7 330 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 FMC1Q96HJ9 113 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 KCNS1Q96KK3 526 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 ANKRD17O75179 2603 aaKnown RBP6.84□□□□□ -1.31
UBE3B-208ENST00000538070 CSMD2Q7Z408 3487 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 TRAV40A0A0B4J280 105 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 A1L4Q6 167 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 INS-IGF2F8WCM5 200 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 ORM1P02763 201 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 C3orf79P0CE67 100 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 ZNF562Q6V9R5 426 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 LY6G5BQ8NDX9 201 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 SHANK2-AS3Q9BTD1 123 aa6.84□□□□□ -1.31
UBE3B-208ENST00000538070 TRBV19A0A075B6N1 114 aa6.83□□□□□ -1.32
UBE3B-208ENST00000538070 ARMS2P0C7Q2 107 aa6.83□□□□□ -1.32
UBE3B-208ENST00000538070 RELQ04864 619 aaPredicted RBP6.83□□□□□ -1.32
UBE3B-208ENST00000538070 ERCC8Q13216 396 aa6.83□□□□□ -1.32
UBE3B-208ENST00000538070 C11orf71Q6IPW1 123 aa6.83□□□□□ -1.32
UBE3B-208ENST00000538070 TRBV9A0A0B4J1U6 114 aa6.83□□□□□ -1.32
UBE3B-208ENST00000538070 M0R1W7 72 aa6.83□□□□□ -1.32
UBE3B-208ENST00000538070 TOMM40O96008 361 aa6.83□□□□□ -1.32
UBE3B-208ENST00000538070 EFNA4P52798 201 aa6.83□□□□□ -1.32
UBE3B-208ENST00000538070 SPATA45Q537H7 98 aa6.83□□□□□ -1.32
UBE3B-208ENST00000538070 NIT1Q86X76 327 aa6.83□□□□□ -1.32
UBE3B-208ENST00000538070 NDUFAF3Q9BU61 184 aa6.83□□□□□ -1.32
UBE3B-208ENST00000538070 TRAV9-1A0A075B6T8 112 aa6.83□□□□□ -1.32
UBE3B-208ENST00000538070 IGHV7-81A0A0B4J1V7 117 aa6.83□□□□□ -1.32
UBE3B-208ENST00000538070 CFAP161Q6P656 301 aa6.83□□□□□ -1.32
UBE3B-208ENST00000538070 PRB1P04280 392 aa6.82□□□□□ -1.32
UBE3B-208ENST00000538070 PAX1P15863 534 aa6.82□□□□□ -1.32
UBE3B-208ENST00000538070 TFPI2P48307 235 aa6.82□□□□□ -1.32
UBE3B-208ENST00000538070 ATP5J2P56134 94 aa6.82□□□□□ -1.32
UBE3B-208ENST00000538070 LINC00173Q6ZV60 143 aa6.82□□□□□ -1.32
UBE3B-208ENST00000538070 WFDC3Q8IUB2 231 aa6.82□□□□□ -1.32
UBE3B-208ENST00000538070 ITLN2Q8WWU7 325 aaPredicted RBP6.82□□□□□ -1.32
UBE3B-208ENST00000538070 MRPL27Q9P0M9 148 aaKnown RBP6.82□□□□□ -1.32
UBE3B-208ENST00000538070 TP73-AS1Q9UF72 201 aa6.82□□□□□ -1.32
UBE3B-208ENST00000538070 RABAC1Q9UI14 185 aa6.82□□□□□ -1.32
UBE3B-208ENST00000538070 RBPMS2Q6ZRY4 209 aaKnown RBP6.82□□□□□ -1.32
UBE3B-208ENST00000538070 SVIPQ8NHG7 77 aa6.82□□□□□ -1.32
UBE3B-208ENST00000538070 C1RLQ9NZP8 487 aa6.82□□□□□ -1.32
UBE3B-208ENST00000538070 MYCNOSP40205 109 aa6.82□□□□□ -1.32
UBE3B-208ENST00000538070 Q0VG73 95 aa6.82□□□□□ -1.32
UBE3B-208ENST00000538070 Q6ZN92 141 aa6.82□□□□□ -1.32
UBE3B-208ENST00000538070 PIP4P2Q8N4L2 257 aa6.82□□□□□ -1.32
UBE3B-208ENST00000538070 VGLL1Q99990 258 aa6.82□□□□□ -1.32
UBE3B-208ENST00000538070 TMEM213A2RRL7 107 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 SMKR1H3BMG3 65 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 H3BRN7 92 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 LTAP01374 205 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms