RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 RBMXL3Q8N7X1 1067 aaKnown RBP2.97□□□□□ -1.93
MCF2-210ENST00000536274 OR9G4Q8NGQ1 327 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 DEFB104AQ8WTQ1 72 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 FLYWCH2Q96CP2 140 aaKnown RBP2.97□□□□□ -1.93
MCF2-210ENST00000536274 ZNF414Q96IQ9 312 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 FANCD2OSQ96PS1 177 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 LINC01587Q99440 93 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 HLA-DRB4X5D2U9 266 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 CHD6Q8TD26 2715 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 F5P12259 2224 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 FREM1Q5H8C1 2179 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 LAMA5O15230 3695 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 TNFSF11O14788 317 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 MPDU1O75352 247 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 ZNF688P0C7X2 276 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 AREGP15514 252 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 RRN3P1Q2M238 152 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 TMEM155Q4W5P6 130 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 FAM162BQ5T6X4 162 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 HLA-DQA1Q5Y7H0 255 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 TRPT1Q86TN4 253 aaKnown RBP2.97□□□□□ -1.93
MCF2-210ENST00000536274 PPP1R27Q86WC6 154 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 CIARTQ8N365 385 aaPredicted RBP2.97□□□□□ -1.93
MCF2-210ENST00000536274 WIPF2Q8TF74 440 aaPredicted RBP2.97□□□□□ -1.93
MCF2-210ENST00000536274 LIN7CQ9NUP9 197 aaKnown RBP2.97□□□□□ -1.93
MCF2-210ENST00000536274 PKD1L2Q7Z442 2459 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 F5H768 121 aa2.96□□□□□ -1.93
MCF2-210ENST00000536274 H7C2G1 150 aa2.96□□□□□ -1.93
MCF2-210ENST00000536274 MFAP4P55083 255 aa2.96□□□□□ -1.93
MCF2-210ENST00000536274 UTF1Q5T230 341 aa2.96□□□□□ -1.93
MCF2-210ENST00000536274 RBPMS2Q6ZRY4 209 aaKnown RBP2.96□□□□□ -1.93
MCF2-210ENST00000536274 FOXL2NBQ6ZUU3 175 aa2.96□□□□□ -1.93
MCF2-210ENST00000536274 OR9G1Q8NH87 305 aa2.96□□□□□ -1.93
MCF2-210ENST00000536274 KIR2DL5BQ8NHK3 375 aa2.96□□□□□ -1.93
MCF2-210ENST00000536274 DCTN5Q9BTE1 182 aa2.96□□□□□ -1.93
MCF2-210ENST00000536274 PHPT1Q9NRX4 125 aaPredicted RBP2.96□□□□□ -1.93
MCF2-210ENST00000536274 EPDR1Q9UM22 224 aa2.96□□□□□ -1.93
MCF2-210ENST00000536274 AMMECR1Q9Y4X0 333 aaPredicted RBP2.96□□□□□ -1.93
MCF2-210ENST00000536274 ATMQ13315 3056 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 PRSS38A1L453 326 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 D6R8Y8 96 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 LMO7DNF2Z398 122 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 ENSAO43768 121 aaKnown RBP2.96□□□□□ -1.94
MCF2-210ENST00000536274 NDUFS7O75251 213 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 FCN3O75636 299 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 TCL1BO95988 128 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 MOSP00540 346 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 CD3EP07766 207 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 ZNF32P17041 273 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 CD40P25942 277 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 UBE2L3P68036 154 aaKnown RBP2.96□□□□□ -1.94
MCF2-210ENST00000536274 TMEM42Q69YG0 159 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 C15orf53Q8NAA6 179 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 ITLN1Q8WWA0 313 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 NABP1Q96AH0 204 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 PIMREGQ9BSJ6 248 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 CYSTM1Q9H1C7 97 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 MAP1LC3AQ9H492 121 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 CALYQ9NYX4 217 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 PROCRQ9UNN8 238 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 CACNA1GO43497 2377 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 TRAV40A0A0B4J280 105 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 CENPVL3A0A0U1RRI6 287 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 KIR2DS1A0A191URI9 304 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 WI2-2373I1.2A0A1W2PRP0 233 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 TMEM213A2RRL7 107 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 FCGR3BO75015 233 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 IGLC6P0CF74 106 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 SRD5A1P18405 259 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 RPS21P63220 83 aaKnown RBP2.96□□□□□ -1.94
MCF2-210ENST00000536274 KIR2DS1Q14954 304 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 LINC00477Q96M19 166 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 RASL11BQ9BPW5 248 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 KLRF1Q9NZS2 232 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 HIGD1BQ9P298 99 aa2.96□□□□□ -1.94
MCF2-210ENST00000536274 ZZEF1O43149 2961 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 GPR179Q6PRD1 2367 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 PTPRZ1P23471 2315 aaPredicted RBP2.95□□□□□ -1.94
MCF2-210ENST00000536274 SPTY2D1-AS1A0A0U1RR47 76 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 TEX49A0A1B0GTD5 131 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 FAM236AA0A1B0GUQ0 79 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 FAM236BA0A1B0GV22 79 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 FRG2CA6NGY1 282 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 C9JAW5 83 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 KIR2DS3K7RE56 304 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 NDUFA3O95167 84 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 PRSS1P07477 247 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 SSR4P51571 173 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 KIR2DS3Q14952 304 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 AMN1Q8IY45 258 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 PPDPFLQ8WWR9 84 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 CFHR4Q92496 578 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 LEAP2Q969E1 77 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 IFI27L1Q96BM0 104 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 TMEM101Q96IK0 257 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 HHLA3Q9XRX5 114 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 HIGD1AQ9Y241 93 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 LY96Q9Y6Y9 160 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 GATA1P15976 413 aaPredicted RBP2.95□□□□□ -1.94
MCF2-210ENST00000536274 EMP1P54849 157 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms