RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ATP5L2Q7Z4Y8 100 aa14.29□□□□□ -0.12
RAB40C-203ENST00000535977 INSIG2Q9Y5U4 225 aa14.29□□□□□ -0.12
RAB40C-203ENST00000535977 CD300EQ496F6 205 aaPredicted RBP14.28□□□□□ -0.12
RAB40C-203ENST00000535977 PATE2Q6UY27 113 aa14.28□□□□□ -0.12
RAB40C-203ENST00000535977 PIEZO2Q9H5I5 2752 aa14.28□□□□□ -0.12
RAB40C-203ENST00000535977 TRAV5A0A0B4J249 113 aa14.28□□□□□ -0.12
RAB40C-203ENST00000535977 ZNF207O43670 478 aaKnown RBP14.28□□□□□ -0.12
RAB40C-203ENST00000535977 HBBP68871 147 aa14.28□□□□□ -0.12
RAB40C-203ENST00000535977 PRR30Q53SZ7 412 aaPredicted RBP14.28□□□□□ -0.12
RAB40C-203ENST00000535977 TMEM116Q8NCL8 245 aa14.28□□□□□ -0.12
RAB40C-203ENST00000535977 HSPB8Q9UJY1 196 aa14.28□□□□□ -0.12
RAB40C-203ENST00000535977 MORN5Q5VZ52 161 aa14.28□□□□□ -0.12
RAB40C-203ENST00000535977 SIGLEC9Q9Y336 463 aa14.28□□□□□ -0.12
RAB40C-203ENST00000535977 TMEM189A5PLL7 270 aa14.27□□□□□ -0.12
RAB40C-203ENST00000535977 BUB1B-PAK6H3BSN5 160 aa14.27□□□□□ -0.12
RAB40C-203ENST00000535977 NCR2O95944 276 aa14.27□□□□□ -0.12
RAB40C-203ENST00000535977 FABP2P12104 132 aa14.27□□□□□ -0.12
RAB40C-203ENST00000535977 SSBP2P81877 361 aaPredicted RBP14.27□□□□□ -0.12
RAB40C-203ENST00000535977 NBEAQ8NFP9 2946 aa14.27□□□□□ -0.13
RAB40C-203ENST00000535977 ZNF329Q86UD4 541 aa14.27□□□□□ -0.13
RAB40C-203ENST00000535977 C8orf46Q8TAG6 207 aa14.27□□□□□ -0.13
RAB40C-203ENST00000535977 ZNF48Q96MX3 618 aaPredicted RBP14.27□□□□□ -0.13
RAB40C-203ENST00000535977 MSRB2Q9Y3D2 182 aa14.27□□□□□ -0.13
RAB40C-203ENST00000535977 IGHV1-3A0A0C4DH29 117 aa14.26□□□□□ -0.13
RAB40C-203ENST00000535977 PEX7O00628 323 aa14.26□□□□□ -0.13
RAB40C-203ENST00000535977 LINC00305Q7Z4B0 112 aa14.26□□□□□ -0.13
RAB40C-203ENST00000535977 RITA1Q96K30 269 aa14.26□□□□□ -0.13
RAB40C-203ENST00000535977 SRSF8Q9BRL6 282 aaKnown RBP14.26□□□□□ -0.13
RAB40C-203ENST00000535977 TPSG1Q9NRR2 321 aa14.26□□□□□ -0.13
RAB40C-203ENST00000535977 EPG5Q9HCE0 2579 aa14.26□□□□□ -0.13
RAB40C-203ENST00000535977 FXYD5Q96DB9 178 aa14.26□□□□□ -0.13
RAB40C-203ENST00000535977 TMUB1Q9BVT8 246 aa14.26□□□□□ -0.13
RAB40C-203ENST00000535977 TCTAP57738 103 aa14.25□□□□□ -0.13
RAB40C-203ENST00000535977 ARFGEF3Q5TH69 2177 aa14.25□□□□□ -0.13
RAB40C-203ENST00000535977 FBLL1A6NHQ2 334 aaKnown RBP14.25□□□□□ -0.13
RAB40C-203ENST00000535977 FAM87AP0C7U9 286 aa14.25□□□□□ -0.13
RAB40C-203ENST00000535977 PPP1R27Q86WC6 154 aa14.25□□□□□ -0.13
RAB40C-203ENST00000535977 TMEM190Q8WZ59 177 aa14.25□□□□□ -0.13
RAB40C-203ENST00000535977 PTPRQQ9UMZ3 2332 aa14.24□□□□□ -0.13
RAB40C-203ENST00000535977 IGHV3-72A0A0B4J1Y9 119 aa14.24□□□□□ -0.13
RAB40C-203ENST00000535977 PYYP10082 97 aa14.24□□□□□ -0.13
RAB40C-203ENST00000535977 ADAMTSL5Q6ZMM2 481 aa14.24□□□□□ -0.13
RAB40C-203ENST00000535977 MYCNOSP40205 109 aa14.24□□□□□ -0.13
RAB40C-203ENST00000535977 RPEQ96AT9 228 aa14.24□□□□□ -0.13
RAB40C-203ENST00000535977 F11RQ9Y624 299 aaKnown RBP14.24□□□□□ -0.13
RAB40C-203ENST00000535977 CSN3P07498 182 aa14.23□□□□□ -0.13
RAB40C-203ENST00000535977 SAMD5Q5TGI4 173 aa14.23□□□□□ -0.13
RAB40C-203ENST00000535977 HCP5Q6MZN7 132 aa14.23□□□□□ -0.13
RAB40C-203ENST00000535977 CFAP161Q6P656 301 aa14.23□□□□□ -0.13
RAB40C-203ENST00000535977 FA2HQ7L5A8 372 aa14.23□□□□□ -0.13
RAB40C-203ENST00000535977 NEU4Q8WWR8 484 aaPredicted RBP14.23□□□□□ -0.13
RAB40C-203ENST00000535977 MRPL36Q9P0J6 103 aaKnown RBP14.23□□□□□ -0.13
RAB40C-203ENST00000535977 A1L4Q6 167 aa14.23□□□□□ -0.13
RAB40C-203ENST00000535977 ZNF672Q499Z4 452 aaPredicted RBP14.23□□□□□ -0.13
RAB40C-203ENST00000535977 BOD1L2Q8IYS8 172 aa14.23□□□□□ -0.13
RAB40C-203ENST00000535977 C7orf69Q9H7B7 122 aa14.23□□□□□ -0.13
RAB40C-203ENST00000535977 BLNKQ8WV28 456 aa14.22□□□□□ -0.13
RAB40C-203ENST00000535977 EPDR1Q9UM22 224 aa14.22□□□□□ -0.13
RAB40C-203ENST00000535977 SMG1Q96Q15 3661 aaKnown RBP14.22□□□□□ -0.13
RAB40C-203ENST00000535977 SPENQ96T58 3664 aaKnown RBP14.22□□□□□ -0.13
RAB40C-203ENST00000535977 PLAUP00749 431 aa14.22□□□□□ -0.13
RAB40C-203ENST00000535977 ORM2P19652 201 aa14.22□□□□□ -0.13
RAB40C-203ENST00000535977 UCNP55089 124 aa14.22□□□□□ -0.13
RAB40C-203ENST00000535977 LINC01560Q8TB33 94 aa14.22□□□□□ -0.13
RAB40C-203ENST00000535977 PGLYRP4Q96LB8 373 aa14.22□□□□□ -0.13
RAB40C-203ENST00000535977 SPATA25Q9BR10 227 aa14.22□□□□□ -0.13
RAB40C-203ENST00000535977 ZNF747Q9BV97 191 aa14.22□□□□□ -0.13
RAB40C-203ENST00000535977 ROS1P08922 2347 aa14.22□□□□□ -0.13
RAB40C-203ENST00000535977 IGHV3-48P01763 117 aa14.21□□□□□ -0.13
RAB40C-203ENST00000535977 FCGR2BP31994 310 aaPredicted RBP14.21□□□□□ -0.13
RAB40C-203ENST00000535977 KLF12Q9Y4X4 402 aa14.21□□□□□ -0.13
RAB40C-203ENST00000535977 PCNX1Q96RV3 2341 aa14.21□□□□□ -0.13
RAB40C-203ENST00000535977 LY6LH3BQJ8 138 aa14.21□□□□□ -0.14
RAB40C-203ENST00000535977 K7EQM0 130 aa14.21□□□□□ -0.14
RAB40C-203ENST00000535977 SMAD7O15105 426 aaKnown RBP14.21□□□□□ -0.14
RAB40C-203ENST00000535977 TCTEX1D4Q5JR98 221 aa14.21□□□□□ -0.14
RAB40C-203ENST00000535977 LY6G5BQ8NDX9 201 aa14.21□□□□□ -0.14
RAB40C-203ENST00000535977 GTSF1Q8WW33 167 aa14.21□□□□□ -0.14
RAB40C-203ENST00000535977 NDFIP1Q9BT67 221 aa14.21□□□□□ -0.14
RAB40C-203ENST00000535977 TEX22C9J3V5 150 aa14.2□□□□□ -0.14
RAB40C-203ENST00000535977 SGK494Q96LW2 274 aa14.2□□□□□ -0.14
RAB40C-203ENST00000535977 RAB1BQ9H0U4 201 aa14.2□□□□□ -0.14
RAB40C-203ENST00000535977 PKD1L2Q7Z442 2459 aa14.2□□□□□ -0.14
RAB40C-203ENST00000535977 SLC25A5P05141 298 aaKnown RBP14.2□□□□□ -0.14
RAB40C-203ENST00000535977 TM4SF20Q53R12 229 aa14.2□□□□□ -0.14
RAB40C-203ENST00000535977 FOXI2Q6ZQN5 318 aa14.2□□□□□ -0.14
RAB40C-203ENST00000535977 PIP4P2Q8N4L2 257 aa14.2□□□□□ -0.14
RAB40C-203ENST00000535977 RAXQ9Y2V3 346 aa14.2□□□□□ -0.14
RAB40C-203ENST00000535977 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.19□□□□□ -0.14
RAB40C-203ENST00000535977 MOSP00540 346 aa14.19□□□□□ -0.14
RAB40C-203ENST00000535977 CNTFRP26992 372 aa14.19□□□□□ -0.14
RAB40C-203ENST00000535977 OR9G4Q8NGQ1 327 aa14.19□□□□□ -0.14
RAB40C-203ENST00000535977 DPF1Q92782 380 aa14.19□□□□□ -0.14
RAB40C-203ENST00000535977 SPANXB1Q9NS25 103 aaPredicted RBP14.19□□□□□ -0.14
RAB40C-203ENST00000535977 PGPA6NDG6 321 aa14.19□□□□□ -0.14
RAB40C-203ENST00000535977 TIMD4Q96H15 378 aa14.19□□□□□ -0.14
RAB40C-203ENST00000535977 GPR82Q96P67 336 aa14.19□□□□□ -0.14
RAB40C-203ENST00000535977 GEMIN7Q9H840 131 aaKnown RBP14.19□□□□□ -0.14
RAB40C-203ENST00000535977 FAM90A27PA6NNH2 459 aa14.18□□□□□ -0.14
RAB40C-203ENST00000535977 LYNX1G3V0Z9 82 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms