RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 RPUSD4Q96CM3 377 aaKnown RBP9.05□□□□□ -0.96
TNFRSF1A-207ENST00000535958 C17orf77Q96MU5 243 aa9.05□□□□□ -0.96
TNFRSF1A-207ENST00000535958 MRPS26Q9BYN8 205 aaKnown RBP9.05□□□□□ -0.96
TNFRSF1A-207ENST00000535958 PTTG2Q9NZH5 202 aa9.05□□□□□ -0.96
TNFRSF1A-207ENST00000535958 A0A087X0K7 114 aa9.04□□□□□ -0.96
TNFRSF1A-207ENST00000535958 A0A0J9YY99 117 aa9.04□□□□□ -0.96
TNFRSF1A-207ENST00000535958 A0A1W2PPQ1 181 aa9.04□□□□□ -0.96
TNFRSF1A-207ENST00000535958 PRSS46E5RG02 174 aa9.04□□□□□ -0.96
TNFRSF1A-207ENST00000535958 SMIM18P0DKX4 95 aa9.04□□□□□ -0.96
TNFRSF1A-207ENST00000535958 TOMM5Q8N4H5 51 aa9.04□□□□□ -0.96
TNFRSF1A-207ENST00000535958 MCFD2Q8NI22 146 aa9.04□□□□□ -0.96
TNFRSF1A-207ENST00000535958 RAB2BQ8WUD1 216 aa9.04□□□□□ -0.96
TNFRSF1A-207ENST00000535958 UHRF2Q96PU4 802 aa9.04□□□□□ -0.96
TNFRSF1A-207ENST00000535958 C20orf144Q9BQM9 153 aa9.04□□□□□ -0.96
TNFRSF1A-207ENST00000535958 Q9H3A6 140 aa9.04□□□□□ -0.96
TNFRSF1A-207ENST00000535958 CXCL2P19875 107 aa9.03□□□□□ -0.96
TNFRSF1A-207ENST00000535958 DLK1P80370 383 aa9.03□□□□□ -0.96
TNFRSF1A-207ENST00000535958 LCN15Q6UWW0 184 aa9.03□□□□□ -0.96
TNFRSF1A-207ENST00000535958 CCDC190Q86UF4 302 aa9.03□□□□□ -0.96
TNFRSF1A-207ENST00000535958 RNASE8Q8TDE3 154 aaKnown RBP9.03□□□□□ -0.96
TNFRSF1A-207ENST00000535958 RXFP4Q8TDU9 374 aa9.03□□□□□ -0.96
TNFRSF1A-207ENST00000535958 ZNF503Q96F45 646 aa9.03□□□□□ -0.96
TNFRSF1A-207ENST00000535958 SLC25A21Q9BQT8 299 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF1A-207ENST00000535958 SLC50A1Q9BRV3 221 aa9.03□□□□□ -0.96
TNFRSF1A-207ENST00000535958 ARL6Q9H0F7 186 aa9.03□□□□□ -0.96
TNFRSF1A-207ENST00000535958 PSENENQ9NZ42 101 aa9.03□□□□□ -0.96
TNFRSF1A-207ENST00000535958 MGAT4CQ9UBM8 478 aa9.03□□□□□ -0.96
TNFRSF1A-207ENST00000535958 GAGE12BA1L429 117 aa9.02□□□□□ -0.97
TNFRSF1A-207ENST00000535958 EREGO14944 169 aa9.02□□□□□ -0.97
TNFRSF1A-207ENST00000535958 GAGE7O76087 117 aa9.02□□□□□ -0.97
TNFRSF1A-207ENST00000535958 SFT2D2O95562 160 aa9.02□□□□□ -0.97
TNFRSF1A-207ENST00000535958 GAGE12FP0CL80 117 aa9.02□□□□□ -0.97
TNFRSF1A-207ENST00000535958 GAGE12GP0CL81 117 aa9.02□□□□□ -0.97
TNFRSF1A-207ENST00000535958 GAGE12IP0CL82 117 aa9.02□□□□□ -0.97
TNFRSF1A-207ENST00000535958 RRAS2P62070 204 aaPredicted RBP9.02□□□□□ -0.97
TNFRSF1A-207ENST00000535958 PYDC2Q56P42 97 aa9.02□□□□□ -0.97
TNFRSF1A-207ENST00000535958 ARV1Q9H2C2 271 aa9.02□□□□□ -0.97
TNFRSF1A-207ENST00000535958 DNAH5Q8TE73 4624 aa9.01□□□□□ -0.97
TNFRSF1A-207ENST00000535958 ZNF701M0R085 212 aaPredicted RBP9.01□□□□□ -0.97
TNFRSF1A-207ENST00000535958 SSSCA1O60232 199 aa9.01□□□□□ -0.97
TNFRSF1A-207ENST00000535958 PRB4P10163 310 aaPredicted RBP9.01□□□□□ -0.97
TNFRSF1A-207ENST00000535958 BTF3P20290 206 aaKnown RBP9.01□□□□□ -0.97
TNFRSF1A-207ENST00000535958 PPP1R1AQ13522 171 aa9.01□□□□□ -0.97
TNFRSF1A-207ENST00000535958 DYNC2LI1Q8TCX1 351 aa9.01□□□□□ -0.97
TNFRSF1A-207ENST00000535958 UPK3BQ9BT76 320 aa9.01□□□□□ -0.97
TNFRSF1A-207ENST00000535958 ZNF586Q9NXT0 402 aa9.01□□□□□ -0.97
TNFRSF1A-207ENST00000535958 MRPS16Q9Y3D3 137 aaKnown RBP9.01□□□□□ -0.97
TNFRSF1A-207ENST00000535958 APOBP04114 4563 aaKnown RBP9.01□□□□□ -0.97
TNFRSF1A-207ENST00000535958 PMS2P5A8MQ11 134 aa9□□□□□ -0.97
TNFRSF1A-207ENST00000535958 EPM2AB3EWF7 344 aa9□□□□□ -0.97
TNFRSF1A-207ENST00000535958 J3KRW8 73 aa9□□□□□ -0.97
TNFRSF1A-207ENST00000535958 GOSR2O14653 212 aa9□□□□□ -0.97
TNFRSF1A-207ENST00000535958 PLP1P60201 277 aa9□□□□□ -0.97
TNFRSF1A-207ENST00000535958 POLR2GP62487 172 aaKnown RBP eCLIP9□□□□□ -0.97
TNFRSF1A-207ENST00000535958 PXDC1Q5TGL8 231 aa9□□□□□ -0.97
TNFRSF1A-207ENST00000535958 TEPPQ6URK8 271 aa9□□□□□ -0.97
TNFRSF1A-207ENST00000535958 ZNF546Q86UE3 836 aa9□□□□□ -0.97
TNFRSF1A-207ENST00000535958 BPIFA4PQ86YQ2 179 aa9□□□□□ -0.97
TNFRSF1A-207ENST00000535958 BCL7BQ9BQE9 202 aa9□□□□□ -0.97
TNFRSF1A-207ENST00000535958 KRTAP1-5Q9BYS1 174 aa9□□□□□ -0.97
TNFRSF1A-207ENST00000535958 NPVFQ9HCQ7 196 aa9□□□□□ -0.97
TNFRSF1A-207ENST00000535958 H3BNG1 76 aa8.99□□□□□ -0.97
TNFRSF1A-207ENST00000535958 COX7A2P2O60397 106 aa8.99□□□□□ -0.97
TNFRSF1A-207ENST00000535958 SCGB1D2O95969 90 aa8.99□□□□□ -0.97
TNFRSF1A-207ENST00000535958 TNFSF8P32971 234 aa8.99□□□□□ -0.97
TNFRSF1A-207ENST00000535958 LEPP41159 167 aa8.99□□□□□ -0.97
TNFRSF1A-207ENST00000535958 KRTAP10-2P60368 255 aa8.99□□□□□ -0.97
TNFRSF1A-207ENST00000535958 SLC38A11Q08AI6 406 aa8.99□□□□□ -0.97
TNFRSF1A-207ENST00000535958 GFI1BQ5VTD9 330 aa8.99□□□□□ -0.97
TNFRSF1A-207ENST00000535958 LINC00305Q7Z4B0 112 aa8.99□□□□□ -0.97
TNFRSF1A-207ENST00000535958 OR10P1Q8NGE3 313 aa8.99□□□□□ -0.97
TNFRSF1A-207ENST00000535958 DEDD2Q8WXF8 326 aa8.99□□□□□ -0.97
TNFRSF1A-207ENST00000535958 ZNF331Q9NQX6 463 aaPredicted RBP8.99□□□□□ -0.97
TNFRSF1A-207ENST00000535958 TRGV2A0A075B6R0 118 aa8.98□□□□□ -0.97
TNFRSF1A-207ENST00000535958 SNRPCP09234 159 aaKnown RBP8.98□□□□□ -0.97
TNFRSF1A-207ENST00000535958 METTL15P1P0C7V9 234 aa8.98□□□□□ -0.97
TNFRSF1A-207ENST00000535958 HOXA5P20719 270 aa8.98□□□□□ -0.97
TNFRSF1A-207ENST00000535958 INPP1P49441 399 aa8.98□□□□□ -0.97
TNFRSF1A-207ENST00000535958 TMBIM6P55061 237 aa8.98□□□□□ -0.97
TNFRSF1A-207ENST00000535958 ERVFC1-1P60608 527 aa8.98□□□□□ -0.97
TNFRSF1A-207ENST00000535958 UBE2MP61081 183 aaKnown RBP8.98□□□□□ -0.97
TNFRSF1A-207ENST00000535958 ESRGQ1W209 222 aa8.98□□□□□ -0.97
TNFRSF1A-207ENST00000535958 PARD6GQ9BYG4 376 aaPredicted RBP8.98□□□□□ -0.97
TNFRSF1A-207ENST00000535958 TMPRSS5Q9H3S3 457 aa8.98□□□□□ -0.97
TNFRSF1A-207ENST00000535958 PXMP4Q9Y6I8 212 aa8.98□□□□□ -0.97
TNFRSF1A-207ENST00000535958 TRAV12-3A0A0B4J271 114 aa8.97□□□□□ -0.97
TNFRSF1A-207ENST00000535958 FNDC10F2Z333 226 aa8.97□□□□□ -0.97
TNFRSF1A-207ENST00000535958 LINC00315P59091 139 aa8.97□□□□□ -0.97
TNFRSF1A-207ENST00000535958 LINC00612Q8N6U2 182 aa8.97□□□□□ -0.97
TNFRSF1A-207ENST00000535958 ZNF680Q8NEM1 530 aa8.97□□□□□ -0.97
TNFRSF1A-207ENST00000535958 TRIM63Q969Q1 353 aa8.97□□□□□ -0.97
TNFRSF1A-207ENST00000535958 SMIM8Q96KF7 97 aa8.97□□□□□ -0.97
TNFRSF1A-207ENST00000535958 PYGO2Q9BRQ0 406 aa8.97□□□□□ -0.97
TNFRSF1A-207ENST00000535958 SLIRPQ9GZT3 109 aaKnown RBP8.97□□□□□ -0.97
TNFRSF1A-207ENST00000535958 H3BTX0 84 aa8.96□□□□□ -0.98
TNFRSF1A-207ENST00000535958 K7EPK0 472 aa8.96□□□□□ -0.98
TNFRSF1A-207ENST00000535958 SIVA1O15304 175 aa8.96□□□□□ -0.98
TNFRSF1A-207ENST00000535958 S100A5P33763 92 aa8.96□□□□□ -0.98
TNFRSF1A-207ENST00000535958 ID3Q02535 119 aa8.96□□□□□ -0.98
TNFRSF1A-207ENST00000535958 KIR3DS1Q14943 382 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms