RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 SP6Q3SY56 376 aa5.42□□□□□ -1.54
CLIP1-206ENST00000535290 PACRGLQ8N7B6 248 aa5.42□□□□□ -1.54
CLIP1-206ENST00000535290 C11orf72Q8NBR9 251 aa5.42□□□□□ -1.54
CLIP1-206ENST00000535290 C20orf144Q9BQM9 153 aa5.42□□□□□ -1.54
CLIP1-206ENST00000535290 DUSP21Q9H596 190 aa5.42□□□□□ -1.54
CLIP1-206ENST00000535290 NDUFB11Q9NX14 153 aa5.42□□□□□ -1.54
CLIP1-206ENST00000535290 SCN3BQ9NY72 215 aa5.42□□□□□ -1.54
CLIP1-206ENST00000535290 HHLA3Q9XRX5 114 aa5.42□□□□□ -1.54
CLIP1-206ENST00000535290 A0A0A6YYH2 397 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 A6NJ64 397 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 CEBPZOSA8MTT3 80 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 E5RGE8 158 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 K7EQD1 137 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 RGS10O43665 173 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 IGLV2-11P01706 119 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 SRIP30626 198 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 UCP3P55916 312 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 TSPAN5P62079 268 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 ZNF415Q09FC8 603 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 FHL2Q14192 279 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 TRIM16LQ309B1 348 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 NMSQ5H8A3 153 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 Q6ZRU5 148 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 C10orf67Q8IYJ2 551 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 OR4D5Q8NGN0 318 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 OR1B1Q8NGR6 318 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 RBPMSQ93062 196 aaKnown RBP5.41□□□□□ -1.54
CLIP1-206ENST00000535290 ST6GAL2Q96JF0 529 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.41□□□□□ -1.54
CLIP1-206ENST00000535290 MUC2Q02817 5179 aa5.41□□□□□ -1.54
CLIP1-206ENST00000535290 IGKV1OR2-108A0A075B7D4 117 aa5.4□□□□□ -1.54
CLIP1-206ENST00000535290 TRAV12-3A0A0B4J271 114 aa5.4□□□□□ -1.54
CLIP1-206ENST00000535290 IGHV3-38A0A0C4DH36 116 aa5.4□□□□□ -1.54
CLIP1-206ENST00000535290 C3orf85A0A1B0GTC6 90 aa5.4□□□□□ -1.54
CLIP1-206ENST00000535290 J3KRW8 73 aa5.4□□□□□ -1.54
CLIP1-206ENST00000535290 ATG12O94817 140 aa5.4□□□□□ -1.54
CLIP1-206ENST00000535290 PGAM2P15259 253 aa5.4□□□□□ -1.54
CLIP1-206ENST00000535290 GYPEP15421 78 aa5.4□□□□□ -1.54
CLIP1-206ENST00000535290 ASAH1Q13510 395 aa5.4□□□□□ -1.54
CLIP1-206ENST00000535290 RNASE11Q8TAA1 199 aaKnown RBP5.4□□□□□ -1.54
CLIP1-206ENST00000535290 RPUSD4Q96CM3 377 aaKnown RBP5.4□□□□□ -1.54
CLIP1-206ENST00000535290 KLF12Q9Y4X4 402 aa5.4□□□□□ -1.54
CLIP1-206ENST00000535290 RBFOX3A6NFN3 312 aa5.39□□□□□ -1.55
CLIP1-206ENST00000535290 SPINK4O60575 86 aa5.39□□□□□ -1.55
CLIP1-206ENST00000535290 FABP1P07148 127 aa5.39□□□□□ -1.55
CLIP1-206ENST00000535290 ORM2P19652 201 aa5.39□□□□□ -1.55
CLIP1-206ENST00000535290 PIGPP57054 158 aa5.39□□□□□ -1.55
CLIP1-206ENST00000535290 RND3P61587 244 aa5.39□□□□□ -1.55
CLIP1-206ENST00000535290 SLAQ13239 276 aa5.39□□□□□ -1.55
CLIP1-206ENST00000535290 LINC01556Q5JQF7 62 aa5.39□□□□□ -1.55
CLIP1-206ENST00000535290 TMEM182Q6ZP80 229 aaPredicted RBP5.39□□□□□ -1.55
CLIP1-206ENST00000535290 PRSS48Q7RTY5 328 aa5.39□□□□□ -1.55
CLIP1-206ENST00000535290 CCDC190Q86UF4 302 aa5.39□□□□□ -1.55
CLIP1-206ENST00000535290 NOXA1Q86UR1 476 aa5.39□□□□□ -1.55
CLIP1-206ENST00000535290 GPR82Q96P67 336 aa5.39□□□□□ -1.55
CLIP1-206ENST00000535290 TRGV9Q99603 122 aa5.39□□□□□ -1.55
CLIP1-206ENST00000535290 PYGO2Q9BRQ0 406 aa5.39□□□□□ -1.55
CLIP1-206ENST00000535290 MRPL32Q9BYC8 188 aaKnown RBP5.39□□□□□ -1.55
CLIP1-206ENST00000535290 C8orf4Q9NR00 106 aa5.39□□□□□ -1.55
CLIP1-206ENST00000535290 TXNL4BQ9NX01 149 aaKnown RBP5.39□□□□□ -1.55
CLIP1-206ENST00000535290 CACNG5Q9UF02 275 aa5.39□□□□□ -1.55
CLIP1-206ENST00000535290 TPRKBQ9Y3C4 175 aa5.39□□□□□ -1.55
CLIP1-206ENST00000535290 LINC00854A0A1B0GVQ3 168 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 PRSS47A8MTI9 375 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 PRAC2D3DTV9 90 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 GABARAPH6UMI1 98 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 GABARAPO95166 117 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 SDC2P34741 201 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 GPX4P36969 197 aaPredicted RBP5.38□□□□□ -1.55
CLIP1-206ENST00000535290 MXD1Q05195 221 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 MEF2DQ14814 521 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 MORN5Q5VZ52 161 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 FAM219AQ8IW50 185 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 THAP8Q8NA92 274 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 LHFPL5Q8TAF8 219 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 ZNF431Q8TF32 576 aaPredicted RBP5.38□□□□□ -1.55
CLIP1-206ENST00000535290 BLNKQ8WV28 456 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 SLC35E1Q96K37 410 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 C1orf43Q9BWL3 253 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 MRPL16Q9NX20 251 aaKnown RBP5.38□□□□□ -1.55
CLIP1-206ENST00000535290 SLC45A2Q9UMX9 530 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 TMEM56-RWDD3S4R434 201 aa5.38□□□□□ -1.55
CLIP1-206ENST00000535290 IGHV3-30P01768 117 aa5.37□□□□□ -1.55
CLIP1-206ENST00000535290 IGHV3-33P01772 117 aa5.37□□□□□ -1.55
CLIP1-206ENST00000535290 IGHV3-30-3P0DP02 117 aa5.37□□□□□ -1.55
CLIP1-206ENST00000535290 IGHV3-30-5P0DP03 117 aa5.37□□□□□ -1.55
CLIP1-206ENST00000535290 TNFSF8P32971 234 aa5.37□□□□□ -1.55
CLIP1-206ENST00000535290 RCVRNP35243 200 aa5.37□□□□□ -1.55
CLIP1-206ENST00000535290 TDRG1Q3Y452 100 aa5.37□□□□□ -1.55
CLIP1-206ENST00000535290 GGNBP1Q5YKI7 109 aa5.37□□□□□ -1.55
CLIP1-206ENST00000535290 CFAP161Q6P656 301 aa5.37□□□□□ -1.55
CLIP1-206ENST00000535290 C9orf47Q6ZRZ4 202 aa5.37□□□□□ -1.55
CLIP1-206ENST00000535290 LGI3Q8N145 548 aa5.37□□□□□ -1.55
CLIP1-206ENST00000535290 ZNF680Q8NEM1 530 aa5.37□□□□□ -1.55
CLIP1-206ENST00000535290 BAALCQ8WXS3 180 aa5.37□□□□□ -1.55
CLIP1-206ENST00000535290 TMEM37Q8WXS4 190 aa5.37□□□□□ -1.55
CLIP1-206ENST00000535290 VGLL1Q99990 258 aa5.37□□□□□ -1.55
CLIP1-206ENST00000535290 PAXXQ9BUH6 204 aa5.37□□□□□ -1.55
CLIP1-206ENST00000535290 TM2D2Q9BX73 214 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms