RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 TRAV41A0A0B4J266 112 aa9.62□□□□□ -0.87
SCARB1-204ENST00000535005 A0A1B0GUS0 222 aa9.62□□□□□ -0.87
SCARB1-204ENST00000535005 NPIPB5A8MRT5 1133 aa9.62□□□□□ -0.87
SCARB1-204ENST00000535005 CRYGCP07315 174 aa9.62□□□□□ -0.87
SCARB1-204ENST00000535005 IGLC2P0DOY2 106 aa9.62□□□□□ -0.87
SCARB1-204ENST00000535005 IGLC3P0DOY3 106 aa9.62□□□□□ -0.87
SCARB1-204ENST00000535005 HNRNPA3P51991 378 aaKnown RBP9.62□□□□□ -0.87
SCARB1-204ENST00000535005 UBE2G2P60604 165 aa9.62□□□□□ -0.87
SCARB1-204ENST00000535005 ERHP84090 104 aaKnown RBP9.62□□□□□ -0.87
SCARB1-204ENST00000535005 SPATA45Q537H7 98 aa9.62□□□□□ -0.87
SCARB1-204ENST00000535005 SPINK9Q5DT21 86 aa9.62□□□□□ -0.87
SCARB1-204ENST00000535005 TTC9CQ8N5M4 171 aa9.62□□□□□ -0.87
SCARB1-204ENST00000535005 ENY2Q9NPA8 101 aa9.62□□□□□ -0.87
SCARB1-204ENST00000535005 MRPL27Q9P0M9 148 aaKnown RBP9.62□□□□□ -0.87
SCARB1-204ENST00000535005 FBXL7Q9UJT9 491 aa9.62□□□□□ -0.87
SCARB1-204ENST00000535005 LAMTOR2Q9Y2Q5 125 aa9.62□□□□□ -0.87
SCARB1-204ENST00000535005 SCO2A0A1W2PP80 73 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 SNURFLB1AK76 121 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 GCHFRP30047 84 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 PPIFP30405 207 aaKnown RBP9.61□□□□□ -0.87
SCARB1-204ENST00000535005 ATP5IP56385 69 aaPredicted RBP9.61□□□□□ -0.87
SCARB1-204ENST00000535005 KLK9Q2XQG4 91 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 UNQ5815/PRO19632Q6UWF5 114 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 FAM110DQ8TAY7 271 aaPredicted RBP9.61□□□□□ -0.87
SCARB1-204ENST00000535005 GGTLC1Q9BX51 225 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 WNT10AQ9GZT5 417 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 HEYLQ9NQ87 328 aaPredicted RBP9.61□□□□□ -0.87
SCARB1-204ENST00000535005 KLK9Q9UKQ9 250 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 CUBNO60494 3623 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 G3V318 75 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 BRI3O95415 125 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 CFHR3Q02985 330 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 RAB31Q13636 194 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 COTL1Q14019 142 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 BATFQ16520 125 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 TXN2Q99757 166 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 GNB4Q9HAV0 340 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 NRN1Q9NPD7 142 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 V9GYV3 84 aa9.61□□□□□ -0.87
SCARB1-204ENST00000535005 ATRQ13535 2644 aa9.6□□□□□ -0.87
SCARB1-204ENST00000535005 HYPMO75409 117 aa9.6□□□□□ -0.87
SCARB1-204ENST00000535005 ZNF324O75467 553 aaPredicted RBP9.6□□□□□ -0.87
SCARB1-204ENST00000535005 CDKN1BP46527 198 aa9.6□□□□□ -0.87
SCARB1-204ENST00000535005 AMTP48728 403 aa9.6□□□□□ -0.87
SCARB1-204ENST00000535005 KRTDAPP60985 99 aa9.6□□□□□ -0.87
SCARB1-204ENST00000535005 SRSF2Q01130 221 aaKnown RBP9.6□□□□□ -0.87
SCARB1-204ENST00000535005 ECSCRQ19T08 205 aa9.6□□□□□ -0.87
SCARB1-204ENST00000535005 TMEM95Q3KNT9 176 aa9.6□□□□□ -0.87
SCARB1-204ENST00000535005 TDRG1Q3Y452 100 aa9.6□□□□□ -0.87
SCARB1-204ENST00000535005 PVRIGQ6DKI7 326 aa9.6□□□□□ -0.87
SCARB1-204ENST00000535005 LINC01006Q8NI28 216 aa9.6□□□□□ -0.87
SCARB1-204ENST00000535005 TMEM167BQ9NRX6 74 aa9.6□□□□□ -0.87
SCARB1-204ENST00000535005 LINC00527Q9UJ94 153 aa9.6□□□□□ -0.87
SCARB1-204ENST00000535005 TMEM89A2RUT3 159 aa9.59□□□□□ -0.87
SCARB1-204ENST00000535005 PRSS46E5RG02 174 aa9.59□□□□□ -0.87
SCARB1-204ENST00000535005 ISLRO14498 428 aa9.59□□□□□ -0.87
SCARB1-204ENST00000535005 APELAP0DMC3 54 aa9.59□□□□□ -0.87
SCARB1-204ENST00000535005 RNASE2P10153 161 aaKnown RBP9.59□□□□□ -0.87
SCARB1-204ENST00000535005 UBE2V1Q13404 147 aa9.59□□□□□ -0.87
SCARB1-204ENST00000535005 C2orf83Q53S99 150 aa9.59□□□□□ -0.87
SCARB1-204ENST00000535005 FAM162BQ5T6X4 162 aa9.59□□□□□ -0.87
SCARB1-204ENST00000535005 TREML4Q6UXN2 200 aa9.59□□□□□ -0.87
SCARB1-204ENST00000535005 Q6ZN92 141 aa9.59□□□□□ -0.87
SCARB1-204ENST00000535005 PRIMA1Q86XR5 153 aa9.59□□□□□ -0.87
SCARB1-204ENST00000535005 ZNF738Q8NE65 137 aa9.59□□□□□ -0.87
SCARB1-204ENST00000535005 WIPF2Q8TF74 440 aaPredicted RBP9.59□□□□□ -0.87
SCARB1-204ENST00000535005 MGST2Q99735 147 aa9.59□□□□□ -0.87
SCARB1-204ENST00000535005 LSM4Q9Y4Z0 139 aaKnown RBP9.59□□□□□ -0.87
SCARB1-204ENST00000535005 F11RQ9Y624 299 aaKnown RBP9.59□□□□□ -0.87
SCARB1-204ENST00000535005 H3BUA1 57 aa9.59□□□□□ -0.88
SCARB1-204ENST00000535005 K7EN84 100 aa9.59□□□□□ -0.88
SCARB1-204ENST00000535005 IGLV1-40P01703 118 aa9.59□□□□□ -0.88
SCARB1-204ENST00000535005 PTTG1IPP53801 180 aa9.59□□□□□ -0.88
SCARB1-204ENST00000535005 SUB1P53999 127 aaKnown RBP eCLIP9.59□□□□□ -0.884e-6■■■■■ 28.5
SCARB1-204ENST00000535005 TMEM136Q6ZRR5 245 aa9.59□□□□□ -0.88
SCARB1-204ENST00000535005 SLC24A4Q8NFF2 622 aa9.59□□□□□ -0.88
SCARB1-204ENST00000535005 C19orf24Q9BVV8 132 aa9.59□□□□□ -0.88
SCARB1-204ENST00000535005 NPVFQ9HCQ7 196 aa9.59□□□□□ -0.88
SCARB1-204ENST00000535005 NAT8BQ9UHF3 227 aa9.59□□□□□ -0.88
SCARB1-204ENST00000535005 YTHDF2Q9Y5A9 579 aaKnown RBP9.59□□□□□ -0.88
SCARB1-204ENST00000535005 A0A1W2PS18 150 aa9.58□□□□□ -0.88
SCARB1-204ENST00000535005 CLPSL1A2RUU4 121 aa9.58□□□□□ -0.88
SCARB1-204ENST00000535005 IGHG4P01861 327 aa9.58□□□□□ -0.88
SCARB1-204ENST00000535005 GNG4P50150 75 aa9.58□□□□□ -0.88
SCARB1-204ENST00000535005 SLC35B1P78383 322 aa9.58□□□□□ -0.88
SCARB1-204ENST00000535005 TIGITQ495A1 244 aa9.58□□□□□ -0.88
SCARB1-204ENST00000535005 BORCS7Q96B45 105 aa9.58□□□□□ -0.88
SCARB1-204ENST00000535005 COX11Q9Y6N1 276 aa9.58□□□□□ -0.88
SCARB1-204ENST00000535005 PSMB11A5LHX3 300 aa9.57□□□□□ -0.88
SCARB1-204ENST00000535005 PGPEP1LA6NFU8 196 aa9.57□□□□□ -0.88
SCARB1-204ENST00000535005 NDUFB8O95169 186 aa9.57□□□□□ -0.88
SCARB1-204ENST00000535005 NPY1RP25929 384 aa9.57□□□□□ -0.88
SCARB1-204ENST00000535005 RBX1P62877 108 aa9.57□□□□□ -0.88
SCARB1-204ENST00000535005 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.57□□□□□ -0.88
SCARB1-204ENST00000535005 STPG4Q8N801 248 aa9.57□□□□□ -0.88
SCARB1-204ENST00000535005 FANCD2OSQ96PS1 177 aa9.57□□□□□ -0.88
SCARB1-204ENST00000535005 IGLV11-55A0A075B6I3 123 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 SMIM27A0A1W2PRY6 76 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 TSPOP30536 169 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 MFAP2P55001 183 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms