RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 GNPNAT1Q96EK6 184 aaPredicted RBP9.65□□□□□ -0.86
CCDC84-208ENST00000534656 UHRF2Q96PU4 802 aa9.65□□□□□ -0.86
CCDC84-208ENST00000534656 SLC25A21Q9BQT8 299 aaPredicted RBP9.65□□□□□ -0.86
CCDC84-208ENST00000534656 SLIRPQ9GZT3 109 aaKnown RBP9.65□□□□□ -0.86
CCDC84-208ENST00000534656 SCRT2Q9NQ03 307 aa9.65□□□□□ -0.86
CCDC84-208ENST00000534656 PRB4P10163 310 aaPredicted RBP9.64□□□□□ -0.87
CCDC84-208ENST00000534656 TMBIM6P55061 237 aa9.64□□□□□ -0.87
CCDC84-208ENST00000534656 ID3Q02535 119 aa9.64□□□□□ -0.87
CCDC84-208ENST00000534656 OR5I1Q13606 314 aa9.64□□□□□ -0.87
CCDC84-208ENST00000534656 S100A7AQ86SG5 101 aa9.64□□□□□ -0.87
CCDC84-208ENST00000534656 RXFP4Q8TDU9 374 aa9.64□□□□□ -0.87
CCDC84-208ENST00000534656 TRIM63Q969Q1 353 aa9.64□□□□□ -0.87
CCDC84-208ENST00000534656 RPUSD4Q96CM3 377 aaKnown RBP9.64□□□□□ -0.87
CCDC84-208ENST00000534656 ZNF503Q96F45 646 aa9.64□□□□□ -0.87
CCDC84-208ENST00000534656 BCL7BQ9BQE9 202 aa9.64□□□□□ -0.87
CCDC84-208ENST00000534656 C20orf144Q9BQM9 153 aa9.64□□□□□ -0.87
CCDC84-208ENST00000534656 KRTAP1-5Q9BYS1 174 aa9.64□□□□□ -0.87
CCDC84-208ENST00000534656 Q9H3A6 140 aa9.64□□□□□ -0.87
CCDC84-208ENST00000534656 PSENENQ9NZ42 101 aa9.64□□□□□ -0.87
CCDC84-208ENST00000534656 DNAH5Q8TE73 4624 aa9.64□□□□□ -0.87
CCDC84-208ENST00000534656 APOBP04114 4563 aaKnown RBP9.64□□□□□ -0.87
CCDC84-208ENST00000534656 TRAV26-1A0A087WT03 109 aa9.63□□□□□ -0.87
CCDC84-208ENST00000534656 PMS2P5A8MQ11 134 aa9.63□□□□□ -0.87
CCDC84-208ENST00000534656 H7BYZ3 331 aa9.63□□□□□ -0.87
CCDC84-208ENST00000534656 MRPS12O15235 138 aaKnown RBP9.63□□□□□ -0.87
CCDC84-208ENST00000534656 M6PRP20645 277 aa9.63□□□□□ -0.87
CCDC84-208ENST00000534656 POLR2GP62487 172 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCDC84-208ENST00000534656 PATE2Q6UY27 113 aa9.63□□□□□ -0.87
CCDC84-208ENST00000534656 LINC00612Q8N6U2 182 aa9.63□□□□□ -0.87
CCDC84-208ENST00000534656 UPK3BQ9BT76 320 aa9.63□□□□□ -0.87
CCDC84-208ENST00000534656 ARL6Q9H0F7 186 aa9.63□□□□□ -0.87
CCDC84-208ENST00000534656 ZNF701M0R085 212 aaPredicted RBP9.62□□□□□ -0.87
CCDC84-208ENST00000534656 ADAP1O75689 374 aa9.62□□□□□ -0.87
CCDC84-208ENST00000534656 CXCL2P19875 107 aa9.62□□□□□ -0.87
CCDC84-208ENST00000534656 ANXA7P20073 488 aaKnown RBP9.62□□□□□ -0.87
CCDC84-208ENST00000534656 BTF3P20290 206 aaKnown RBP9.62□□□□□ -0.87
CCDC84-208ENST00000534656 KRTAP10-2P60368 255 aa9.62□□□□□ -0.87
CCDC84-208ENST00000534656 KIR3DS1Q14943 382 aa9.62□□□□□ -0.87
CCDC84-208ENST00000534656 ESRGQ1W209 222 aa9.62□□□□□ -0.87
CCDC84-208ENST00000534656 PYDC2Q56P42 97 aa9.62□□□□□ -0.87
CCDC84-208ENST00000534656 NPVFQ9HCQ7 196 aa9.62□□□□□ -0.87
CCDC84-208ENST00000534656 ZNF331Q9NQX6 463 aaPredicted RBP9.62□□□□□ -0.87
CCDC84-208ENST00000534656 RNF24Q9Y225 148 aa9.62□□□□□ -0.87
CCDC84-208ENST00000534656 A0A0J9YY99 117 aa9.61□□□□□ -0.87
CCDC84-208ENST00000534656 A0A1W2PPQ1 181 aa9.61□□□□□ -0.87
CCDC84-208ENST00000534656 H3BNG1 76 aa9.61□□□□□ -0.87
CCDC84-208ENST00000534656 K7EPK0 472 aa9.61□□□□□ -0.87
CCDC84-208ENST00000534656 HOXA5P20719 270 aa9.61□□□□□ -0.87
CCDC84-208ENST00000534656 RRAS2P62070 204 aaPredicted RBP9.61□□□□□ -0.87
CCDC84-208ENST00000534656 DLK1P80370 383 aa9.61□□□□□ -0.87
CCDC84-208ENST00000534656 LCN15Q6UWW0 184 aa9.61□□□□□ -0.87
CCDC84-208ENST00000534656 CCDC28AQ8IWP9 274 aa9.61□□□□□ -0.87
CCDC84-208ENST00000534656 MCFD2Q8NI22 146 aa9.61□□□□□ -0.87
CCDC84-208ENST00000534656 DEDD2Q8WXF8 326 aa9.61□□□□□ -0.87
CCDC84-208ENST00000534656 SMIM8Q96KF7 97 aa9.61□□□□□ -0.87
CCDC84-208ENST00000534656 SLC50A1Q9BRV3 221 aa9.61□□□□□ -0.87
CCDC84-208ENST00000534656 ARV1Q9H2C2 271 aa9.61□□□□□ -0.87
CCDC84-208ENST00000534656 GAGE12BA1L429 117 aa9.6□□□□□ -0.87
CCDC84-208ENST00000534656 FNDC10F2Z333 226 aa9.6□□□□□ -0.87
CCDC84-208ENST00000534656 CCNKO75909 580 aa9.6□□□□□ -0.87
CCDC84-208ENST00000534656 GAGE7O76087 117 aa9.6□□□□□ -0.87
CCDC84-208ENST00000534656 GAGE12FP0CL80 117 aa9.6□□□□□ -0.87
CCDC84-208ENST00000534656 GAGE12GP0CL81 117 aa9.6□□□□□ -0.87
CCDC84-208ENST00000534656 GAGE12IP0CL82 117 aa9.6□□□□□ -0.87
CCDC84-208ENST00000534656 UBE2MP61081 183 aaKnown RBP9.6□□□□□ -0.87
CCDC84-208ENST00000534656 PXDC1Q5TGL8 231 aa9.6□□□□□ -0.87
CCDC84-208ENST00000534656 TEPPQ6URK8 271 aa9.6□□□□□ -0.87
CCDC84-208ENST00000534656 PARD6GQ9BYG4 376 aaPredicted RBP9.6□□□□□ -0.87
CCDC84-208ENST00000534656 MRPS16Q9Y3D3 137 aaKnown RBP9.6□□□□□ -0.87
CCDC84-208ENST00000534656 C9orf170A2RU37 121 aa9.59□□□□□ -0.87
CCDC84-208ENST00000534656 SNURFLB1AK76 121 aa9.59□□□□□ -0.87
CCDC84-208ENST00000534656 H3BMQ9 156 aa9.59□□□□□ -0.87
CCDC84-208ENST00000534656 SSSCA1O60232 199 aa9.59□□□□□ -0.87
CCDC84-208ENST00000534656 RLN2P04090 185 aa9.59□□□□□ -0.87
CCDC84-208ENST00000534656 SNRPCP09234 159 aaKnown RBP9.59□□□□□ -0.87
CCDC84-208ENST00000534656 METTL15P1P0C7V9 234 aa9.59□□□□□ -0.87
CCDC84-208ENST00000534656 GFI1BQ5VTD9 330 aa9.59□□□□□ -0.87
CCDC84-208ENST00000534656 TMEM14EPQ6UXP3 125 aa9.59□□□□□ -0.87
CCDC84-208ENST00000534656 LINC00305Q7Z4B0 112 aa9.59□□□□□ -0.87
CCDC84-208ENST00000534656 OR10P1Q8NGE3 313 aa9.59□□□□□ -0.87
CCDC84-208ENST00000534656 ZNF586Q9NXT0 402 aa9.59□□□□□ -0.87
CCDC84-208ENST00000534656 V9GYH0 126 aa9.59□□□□□ -0.87
CCDC84-208ENST00000534656 PRAC2D3DTV9 90 aa9.58□□□□□ -0.88
CCDC84-208ENST00000534656 GOSR2O14653 212 aa9.58□□□□□ -0.88
CCDC84-208ENST00000534656 SLC38A11Q08AI6 406 aa9.58□□□□□ -0.88
CCDC84-208ENST00000534656 CCDC190Q86UF4 302 aa9.58□□□□□ -0.88
CCDC84-208ENST00000534656 BPIFA4PQ86YQ2 179 aa9.58□□□□□ -0.88
CCDC84-208ENST00000534656 MGAT4CQ9UBM8 478 aa9.58□□□□□ -0.88
CCDC84-208ENST00000534656 SLC17A3O00476 420 aa9.57□□□□□ -0.88
CCDC84-208ENST00000534656 AGPAT2O15120 278 aa9.57□□□□□ -0.88
CCDC84-208ENST00000534656 NOL3O60936 208 aaKnown RBP9.57□□□□□ -0.88
CCDC84-208ENST00000534656 C4orf46Q504U0 113 aa9.57□□□□□ -0.88
CCDC84-208ENST00000534656 ZNF546Q86UE3 836 aa9.57□□□□□ -0.88
CCDC84-208ENST00000534656 ZBTB8BQ8NAP8 495 aaPredicted RBP9.57□□□□□ -0.88
CCDC84-208ENST00000534656 H3BTX0 84 aa9.56□□□□□ -0.88
CCDC84-208ENST00000534656 CT45A10P0DMU9 189 aa9.56□□□□□ -0.88
CCDC84-208ENST00000534656 TAS2R30P59541 319 aa9.56□□□□□ -0.88
CCDC84-208ENST00000534656 DAZ2Q13117 558 aaKnown RBP9.56□□□□□ -0.88
CCDC84-208ENST00000534656 TMEM37Q8WXS4 190 aa9.56□□□□□ -0.88
CCDC84-208ENST00000534656 SAT2Q96F10 170 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms