RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 TRAV5A0A0B4J249 113 aa15.28■□□□□ 0.04
SMPD1-210ENST00000534405 IGF2-ASQ6U949 168 aa15.28■□□□□ 0.04
SMPD1-210ENST00000534405 PRSS3P2Q8NHM4 247 aa15.28■□□□□ 0.04
SMPD1-210ENST00000534405 CACNG8Q8WXS5 425 aa15.28■□□□□ 0.04
SMPD1-210ENST00000534405 KLF12Q9Y4X4 402 aa15.28■□□□□ 0.04
SMPD1-210ENST00000534405 XGP55808 180 aa15.28■□□□□ 0.04
SMPD1-210ENST00000534405 MORN5Q5VZ52 161 aa15.28■□□□□ 0.04
SMPD1-210ENST00000534405 Q6ZS92 163 aa15.28■□□□□ 0.04
SMPD1-210ENST00000534405 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.28■□□□□ 0.04
SMPD1-210ENST00000534405 HINT2Q9BX68 163 aa15.28■□□□□ 0.04
SMPD1-210ENST00000534405 C1QTNF4Q9BXJ3 329 aa15.28■□□□□ 0.04
SMPD1-210ENST00000534405 MAP1BP46821 2468 aaKnown RBP15.28■□□□□ 0.04
SMPD1-210ENST00000534405 IGKV1-16P04430 117 aa15.27■□□□□ 0.04
SMPD1-210ENST00000534405 B5MCH6 92 aa15.27■□□□□ 0.03
SMPD1-210ENST00000534405 PSMG4Q5JS54 123 aa15.27■□□□□ 0.03
SMPD1-210ENST00000534405 CEND1Q8N111 149 aa15.27■□□□□ 0.03
SMPD1-210ENST00000534405 DYSFO75923 2080 aa15.27■□□□□ 0.03
SMPD1-210ENST00000534405 ZNF318Q5VUA4 2279 aa15.26■□□□□ 0.03
SMPD1-210ENST00000534405 A0A1B0GWB2 263 aa15.26■□□□□ 0.03
SMPD1-210ENST00000534405 BRI3O95415 125 aa15.26■□□□□ 0.03
SMPD1-210ENST00000534405 MYCNOSP40205 109 aa15.26■□□□□ 0.03
SMPD1-210ENST00000534405 C3orf36Q3SXR2 165 aa15.26■□□□□ 0.03
SMPD1-210ENST00000534405 MOB3BQ86TA1 216 aa15.26■□□□□ 0.03
SMPD1-210ENST00000534405 GATD1Q8NB37 220 aa15.26■□□□□ 0.03
SMPD1-210ENST00000534405 OSR1Q8TAX0 266 aaPredicted RBP15.26■□□□□ 0.03
SMPD1-210ENST00000534405 ZNF414Q96IQ9 312 aa15.26■□□□□ 0.03
SMPD1-210ENST00000534405 RBMXL3Q8N7X1 1067 aaKnown RBP15.26■□□□□ 0.03
SMPD1-210ENST00000534405 ENY2Q9NPA8 101 aa15.26■□□□□ 0.03
SMPD1-210ENST00000534405 ROS1P08922 2347 aa15.26■□□□□ 0.03
SMPD1-210ENST00000534405 LTAP01374 205 aa15.25■□□□□ 0.03
SMPD1-210ENST00000534405 CD40P25942 277 aa15.25■□□□□ 0.03
SMPD1-210ENST00000534405 GNG5P63218 68 aa15.25■□□□□ 0.03
SMPD1-210ENST00000534405 AMTNQ6UX39 209 aa15.25■□□□□ 0.03
SMPD1-210ENST00000534405 PAXXQ9BUH6 204 aa15.25■□□□□ 0.03
SMPD1-210ENST00000534405 TNFRSF18Q9Y5U5 241 aa15.25■□□□□ 0.03
SMPD1-210ENST00000534405 C16orf97H3BN30 126 aa15.25■□□□□ 0.03
SMPD1-210ENST00000534405 OVOL3O00110 214 aa15.25■□□□□ 0.03
SMPD1-210ENST00000534405 FAM106CPP0CH98 169 aa15.25■□□□□ 0.03
SMPD1-210ENST00000534405 PYYP10082 97 aa15.25■□□□□ 0.03
SMPD1-210ENST00000534405 SRSF1Q07955 248 aaKnown RBP eCLIP15.25■□□□□ 0.03
SMPD1-210ENST00000534405 FHL3Q13643 280 aa15.25■□□□□ 0.03
SMPD1-210ENST00000534405 POU2AF1Q16633 256 aa15.25■□□□□ 0.03
SMPD1-210ENST00000534405 FAM106AQ4KMX7 169 aa15.25■□□□□ 0.03
SMPD1-210ENST00000534405 OR5AN1Q8NGI8 311 aa15.25■□□□□ 0.03
SMPD1-210ENST00000534405 C8orf46Q8TAG6 207 aa15.25■□□□□ 0.03
SMPD1-210ENST00000534405 RALYQ9UKM9 306 aaKnown RBP15.25■□□□□ 0.03
SMPD1-210ENST00000534405 EPDR1Q9UM22 224 aa15.25■□□□□ 0.03
SMPD1-210ENST00000534405 AKAP13Q12802 2813 aa15.25■□□□□ 0.03
SMPD1-210ENST00000534405 VSTM5A8MXK1 200 aa15.24■□□□□ 0.03
SMPD1-210ENST00000534405 TM4SF5O14894 197 aa15.24■□□□□ 0.03
SMPD1-210ENST00000534405 MOSP00540 346 aa15.24■□□□□ 0.03
SMPD1-210ENST00000534405 RPL32P62910 135 aaKnown RBP15.24■□□□□ 0.03
SMPD1-210ENST00000534405 LOXL1Q08397 574 aaPredicted RBP15.24■□□□□ 0.03
SMPD1-210ENST00000534405 UFC1Q9Y3C8 167 aa15.24■□□□□ 0.03
SMPD1-210ENST00000534405 SLC25A48Q6ZT89 311 aaKnown RBP15.24■□□□□ 0.03
SMPD1-210ENST00000534405 ZCCHC24Q8N2G6 241 aaKnown RBP15.24■□□□□ 0.03
SMPD1-210ENST00000534405 LINC00574Q9H8X3 128 aa15.24■□□□□ 0.03
SMPD1-210ENST00000534405 RPUSD1Q9UJJ7 312 aaKnown RBP15.24■□□□□ 0.03
SMPD1-210ENST00000534405 IFI27P40305 119 aaPredicted RBP15.23■□□□□ 0.03
SMPD1-210ENST00000534405 CCL8P80075 99 aa15.23■□□□□ 0.03
SMPD1-210ENST00000534405 RAB9BQ9NP90 201 aa15.23■□□□□ 0.03
SMPD1-210ENST00000534405 RND1Q92730 232 aa15.23■□□□□ 0.03
SMPD1-210ENST00000534405 DAZAP1Q96EP5 407 aaKnown RBP15.23■□□□□ 0.03
SMPD1-210ENST00000534405 UPK2O00526 184 aa15.22■□□□□ 0.03
SMPD1-210ENST00000534405 FXYD5Q96DB9 178 aa15.22■□□□□ 0.03
SMPD1-210ENST00000534405 BSNQ9UPA5 3926 aa15.22■□□□□ 0.03
SMPD1-210ENST00000534405 FCN3O75636 299 aa15.22■□□□□ 0.03
SMPD1-210ENST00000534405 MLANAQ16655 118 aa15.22■□□□□ 0.03
SMPD1-210ENST00000534405 Q6AWC8 147 aa15.22■□□□□ 0.03
SMPD1-210ENST00000534405 OR9G1Q8NH87 305 aa15.22■□□□□ 0.03
SMPD1-210ENST00000534405 RAX2Q96IS3 184 aa15.22■□□□□ 0.03
SMPD1-210ENST00000534405 SGK494Q96LW2 274 aa15.22■□□□□ 0.03
SMPD1-210ENST00000534405 PRELID3AQ96N28 172 aa15.22■□□□□ 0.03
SMPD1-210ENST00000534405 ZNF714Q96N38 554 aa15.22■□□□□ 0.03
SMPD1-210ENST00000534405 ARFGEF3Q5TH69 2177 aa15.21■□□□□ 0.03
SMPD1-210ENST00000534405 PRCDQ00LT1 54 aa15.21■□□□□ 0.03
SMPD1-210ENST00000534405 C12orf74Q32Q52 190 aa15.21■□□□□ 0.03
SMPD1-210ENST00000534405 TEX36Q5VZQ5 186 aa15.21■□□□□ 0.03
SMPD1-210ENST00000534405 PRNDQ9UKY0 176 aa15.21■□□□□ 0.03
SMPD1-210ENST00000534405 ZNF292O60281 2723 aa15.21■□□□□ 0.02
SMPD1-210ENST00000534405 TRBV25-1A0A075B6N4 114 aa15.21■□□□□ 0.02
SMPD1-210ENST00000534405 RRN3P1Q2M238 152 aa15.21■□□□□ 0.02
SMPD1-210ENST00000534405 IFI27L1Q96BM0 104 aa15.21■□□□□ 0.02
SMPD1-210ENST00000534405 RIF1Q5UIP0 2472 aaKnown RBP15.2■□□□□ 0.02
SMPD1-210ENST00000534405 IGKV2D-26A0A0A0MRZ7 120 aa15.2■□□□□ 0.02
SMPD1-210ENST00000534405 NPIPB5A8MRT5 1133 aa15.2■□□□□ 0.02
SMPD1-210ENST00000534405 SHISA9B4DS77 424 aa15.2■□□□□ 0.02
SMPD1-210ENST00000534405 DLL1O00548 723 aa15.2■□□□□ 0.02
SMPD1-210ENST00000534405 CLEC3BP05452 202 aa15.2■□□□□ 0.02
SMPD1-210ENST00000534405 THBDP07204 575 aa15.2■□□□□ 0.02
SMPD1-210ENST00000534405 SAA1P0DJI8 122 aaPredicted RBP15.2■□□□□ 0.02
SMPD1-210ENST00000534405 SMIM20Q8N5G0 67 aa15.2■□□□□ 0.02
SMPD1-210ENST00000534405 FAM57AQ8TBR7 257 aa15.2■□□□□ 0.02
SMPD1-210ENST00000534405 FMC1Q96HJ9 113 aa15.2■□□□□ 0.02
SMPD1-210ENST00000534405 CUL9Q8IWT3 2517 aa15.2■□□□□ 0.02
SMPD1-210ENST00000534405 A0A1B0GUT8 65 aa15.19■□□□□ 0.02
SMPD1-210ENST00000534405 CNIH1O95406 144 aa15.19■□□□□ 0.02
SMPD1-210ENST00000534405 HBDP02042 147 aa15.19■□□□□ 0.02
SMPD1-210ENST00000534405 SLC25A5P05141 298 aaKnown RBP15.19■□□□□ 0.02
SMPD1-210ENST00000534405 NFE4Q86UQ8 179 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms