RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 BAGE3Q86Y29 109 aa10.61□□□□□ -0.71
FOXRED1-218ENST00000534315 GNB4Q9HAV0 340 aa10.61□□□□□ -0.71
FOXRED1-218ENST00000534315 SOX21Q9Y651 276 aaPredicted RBP10.61□□□□□ -0.71
FOXRED1-218ENST00000534315 FAM208BQ5VWN6 2430 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 DIRC3C9JPN6 131 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 CLEC3BP05452 202 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 RPL7P18124 248 aaKnown RBP10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 SLAQ13239 276 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 CT83Q5H943 113 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 GDF5OSQ5U4N7 250 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 RASL11AQ6T310 242 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 DAZAP1Q96EP5 407 aaKnown RBP10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 CCDC140Q96MF4 163 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 MS4A10Q96PG2 267 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 CELSR2Q9HCU4 2923 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 A8MWL6 223 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 APCSP02743 223 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 MSMBP08118 114 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 PSG3Q16557 428 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 TOMM20LQ6UXN7 152 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 GTSF1Q8WW33 167 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 MEGF9Q9H1U4 602 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 AAMDCQ9H7C9 122 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 PSG8Q9UQ74 426 aa10.6□□□□□ -0.71
FOXRED1-218ENST00000534315 ZNF785A8K8V0 405 aa10.59□□□□□ -0.71
FOXRED1-218ENST00000534315 NPIPB6E9PJ23 425 aa10.59□□□□□ -0.71
FOXRED1-218ENST00000534315 K7EQM0 130 aa10.59□□□□□ -0.71
FOXRED1-218ENST00000534315 ESDP10768 282 aa10.59□□□□□ -0.71
FOXRED1-218ENST00000534315 COL8A1P27658 744 aa10.59□□□□□ -0.71
FOXRED1-218ENST00000534315 SRIP30626 198 aa10.59□□□□□ -0.71
FOXRED1-218ENST00000534315 ZC2HC1AQ96GY0 325 aa10.59□□□□□ -0.71
FOXRED1-218ENST00000534315 NOL4LQ96MY1 436 aaPredicted RBP10.59□□□□□ -0.71
FOXRED1-218ENST00000534315 CLEC19AQ6UXS0 136 aa10.58□□□□□ -0.72
FOXRED1-218ENST00000534315 ZFAND3Q9H8U3 227 aa10.58□□□□□ -0.72
FOXRED1-218ENST00000534315 LINC00527Q9UJ94 153 aa10.58□□□□□ -0.72
FOXRED1-218ENST00000534315 LRRK2Q5S007 2527 aa10.58□□□□□ -0.72
FOXRED1-218ENST00000534315 A0A1B0GXF2 115 aa10.58□□□□□ -0.72
FOXRED1-218ENST00000534315 CAMPP49913 170 aa10.58□□□□□ -0.72
FOXRED1-218ENST00000534315 ATP5L2Q7Z4Y8 100 aa10.58□□□□□ -0.72
FOXRED1-218ENST00000534315 ZFP30Q9Y2G7 519 aa10.58□□□□□ -0.72
FOXRED1-218ENST00000534315 SMAD5-AS1Q9Y6J3 95 aa10.58□□□□□ -0.72
FOXRED1-218ENST00000534315 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.57□□□□□ -0.724e-8■■■■■ 27.5
FOXRED1-218ENST00000534315 TRAV41A0A0B4J266 112 aa10.57□□□□□ -0.72
FOXRED1-218ENST00000534315 TPPP2P59282 170 aa10.57□□□□□ -0.72
FOXRED1-218ENST00000534315 PSG9Q00887 426 aa10.57□□□□□ -0.72
FOXRED1-218ENST00000534315 LY6EQ16553 131 aa10.57□□□□□ -0.72
FOXRED1-218ENST00000534315 C19orf54Q5BKX5 351 aa10.57□□□□□ -0.72
FOXRED1-218ENST00000534315 OR10J3Q5JRS4 329 aa10.57□□□□□ -0.72
FOXRED1-218ENST00000534315 C9orf152Q5JTZ5 239 aa10.57□□□□□ -0.72
FOXRED1-218ENST00000534315 EEF1AKMT3Q96AZ1 226 aa10.57□□□□□ -0.72
FOXRED1-218ENST00000534315 PGLYRP4Q96LB8 373 aa10.57□□□□□ -0.72
FOXRED1-218ENST00000534315 SSBP4Q9BWG4 385 aaPredicted RBP10.57□□□□□ -0.72
FOXRED1-218ENST00000534315 LURAP1LQ8IV03 231 aa10.57□□□□□ -0.72
FOXRED1-218ENST00000534315 OR2D3Q8NGH3 330 aa10.57□□□□□ -0.72
FOXRED1-218ENST00000534315 HIF1ANQ9NWT6 349 aa10.57□□□□□ -0.72
FOXRED1-218ENST00000534315 ZNF253O75346 499 aa10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 CSN1S1P47710 185 aa10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 PAFAH1B2P68402 229 aa10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 PRR31Q5SQ13 230 aa10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 C16orf54Q6UWD8 224 aa10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 OR4B1Q8NGF8 309 aa10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 RCHY1Q96PM5 261 aa10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 GFRA4Q9GZZ7 299 aa10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 IGKV2-40A0A087WW87 121 aaPredicted RBP10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 TRBV7-1A0A0A6YYK4 115 aa10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 H3BUX3 64 aa10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 IGKV2D-40P01614 121 aaPredicted RBP10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 CRIP2P52943 208 aaPredicted RBP10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 HBBP68871 147 aa10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 IGFL4Q6B9Z1 124 aa10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 RBPMS2Q6ZRY4 209 aaKnown RBP10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 C8orf49Q96NF6 230 aa10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 PRO1933Q9H354 126 aa10.56□□□□□ -0.72
FOXRED1-218ENST00000534315 CLPSL1A2RUU4 121 aa10.55□□□□□ -0.72
FOXRED1-218ENST00000534315 B4DSR2 109 aa10.55□□□□□ -0.72
FOXRED1-218ENST00000534315 AVPP01185 164 aa10.55□□□□□ -0.72
FOXRED1-218ENST00000534315 HLA-DMBP28068 263 aa10.55□□□□□ -0.72
FOXRED1-218ENST00000534315 S100A7P31151 101 aa10.55□□□□□ -0.72
FOXRED1-218ENST00000534315 ATP5G2Q06055 141 aa10.55□□□□□ -0.72
FOXRED1-218ENST00000534315 Q6ZWC4 215 aa10.55□□□□□ -0.72
FOXRED1-218ENST00000534315 SAMD10Q9BYL1 202 aa10.55□□□□□ -0.72
FOXRED1-218ENST00000534315 ANKRD17O75179 2603 aaKnown RBP10.55□□□□□ -0.72
FOXRED1-218ENST00000534315 CSPG4Q6UVK1 2322 aa10.55□□□□□ -0.72
FOXRED1-218ENST00000534315 CSMD2Q7Z408 3487 aa10.54□□□□□ -0.72
FOXRED1-218ENST00000534315 FAM231BA6NCW3 169 aa10.54□□□□□ -0.72
FOXRED1-218ENST00000534315 BUB3O43684 328 aa10.54□□□□□ -0.72
FOXRED1-218ENST00000534315 CRIP1P50238 77 aa10.54□□□□□ -0.72
FOXRED1-218ENST00000534315 DSCR9P59020 149 aa10.54□□□□□ -0.72
FOXRED1-218ENST00000534315 PKIAP61925 76 aa10.54□□□□□ -0.72
FOXRED1-218ENST00000534315 SRSF1Q07955 248 aaKnown RBP eCLIP10.54□□□□□ -0.725e-10■■■■■ 36.9
FOXRED1-218ENST00000534315 ZNF843Q8N446 348 aa10.54□□□□□ -0.72
FOXRED1-218ENST00000534315 POLQO75417 2590 aa10.54□□□□□ -0.72
FOXRED1-218ENST00000534315 IGHV3-66A0A0C4DH42 116 aa10.54□□□□□ -0.72
FOXRED1-218ENST00000534315 SERTM2A0A1B0GWG4 89 aa10.54□□□□□ -0.72
FOXRED1-218ENST00000534315 A1L4Q6 167 aa10.54□□□□□ -0.72
FOXRED1-218ENST00000534315 A6NDX4 124 aa10.54□□□□□ -0.72
FOXRED1-218ENST00000534315 CHEK1O14757 476 aa10.54□□□□□ -0.72
FOXRED1-218ENST00000534315 SCGB1D1O95968 90 aa10.54□□□□□ -0.72
FOXRED1-218ENST00000534315 IGHG4P01861 327 aa10.54□□□□□ -0.72
FOXRED1-218ENST00000534315 CD33P20138 364 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms