RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 LINC00527Q9UJ94 153 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 ZFP30Q9Y2G7 519 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 FBN3Q75N90 2809 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 LOC102723971A0A1B0GUV8 181 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 A0A1B0GV50 99 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 HSBP1L1C9JCN9 74 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 H3BUA1 57 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 CORTO00230 105 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 CIDEAO60543 219 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 NDUFB8O95169 186 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 NDUFA7O95182 113 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 MT-CO2P00403 227 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 IGHG4P01861 327 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 DEFA4P12838 97 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 CDKN1BP46527 198 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 CNN1P51911 297 aaKnown RBP4.76□□□□□ -1.65
CMTM1-220ENST00000534143 OR5I1Q13606 314 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 BATFQ16520 125 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 ZNF343Q6P1L6 599 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 CYB561D1Q8N8Q1 229 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 OR4B1Q8NGF8 309 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 OR4X1Q8NH49 305 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 ORAOV1Q8WV07 137 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 TAF15Q92804 592 aaKnown RBP eCLIP4.76□□□□□ -1.65
CMTM1-220ENST00000534143 RAX2Q96IS3 184 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 MS4A10Q96PG2 267 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 IMMP2LQ96T52 175 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 ATP5SQ99766 215 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 C20orf144Q9BQM9 153 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 TMEM147Q9BVK8 224 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 PARD6GQ9BYG4 376 aaPredicted RBP4.76□□□□□ -1.65
CMTM1-220ENST00000534143 MRPL36Q9P0J6 103 aaKnown RBP4.76□□□□□ -1.65
CMTM1-220ENST00000534143 COL6A5A8TX70 2615 aa4.76□□□□□ -1.65
CMTM1-220ENST00000534143 TRAV1-1A0A0B4J248 108 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 TMEM89A2RUT3 159 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 OR2J3O76001 311 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 BCL2P10415 239 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 ATP6V0CP27449 155 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 PSMB8P28062 276 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 PSMB3P49720 205 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 ADIRFQ15847 76 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 GFI1BQ5VTD9 330 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 ETFRF1Q6IPR1 90 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 C10orf99Q6UWK7 81 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 TOMM20LQ6UXN7 152 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 TMEM144Q7Z5S9 345 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 CENPVQ7Z7K6 275 aaPredicted RBP4.75□□□□□ -1.65
CMTM1-220ENST00000534143 THAP8Q8NA92 274 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 TMEM116Q8NCL8 245 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 OR4C5Q8NGB2 326 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 OR2T6Q8NHC8 308 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 CMTM2Q8TAZ6 248 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 VN1R17PQ8TDU5 208 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 WIPF2Q8TF74 440 aaPredicted RBP4.75□□□□□ -1.65
CMTM1-220ENST00000534143 RARRES2Q99969 163 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 VPS25Q9BRG1 176 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 WDR61Q9GZS3 305 aaKnown RBP4.75□□□□□ -1.65
CMTM1-220ENST00000534143 KLK15Q9H2R5 256 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 NPVFQ9HCQ7 196 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 DNAJC4Q9NNZ3 241 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 GNG13Q9P2W3 67 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 C11orf21Q9P2W6 132 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 WDR83OSQ9Y284 106 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 LSM4Q9Y4Z0 139 aaKnown RBP4.75□□□□□ -1.65
CMTM1-220ENST00000534143 ATRQ13535 2644 aa4.75□□□□□ -1.65
CMTM1-220ENST00000534143 IGKV1D-37A0A075B6S9 117 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 IGKV1OR2-108A0A075B7D4 117 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 IGHV3-21A0A0B4J1V1 117 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 PSMB11A5LHX3 300 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 FAM223BA6NKX1 122 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 B5MCH6 92 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 IGHV3-48P01763 117 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 TRGV3P03979 118 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 ELANEP08246 267 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 FCGR2BP31994 310 aaPredicted RBP4.74□□□□□ -1.65
CMTM1-220ENST00000534143 OPRK1P41145 380 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 RAB9AP51151 201 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 HNRNPA3P51991 378 aaKnown RBP4.74□□□□□ -1.65
CMTM1-220ENST00000534143 MFAP4P55083 255 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 SELENOTP62341 195 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 RHOGP84095 191 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 SRSF2Q01130 221 aaKnown RBP4.74□□□□□ -1.65
CMTM1-220ENST00000534143 CYP2G1PQ6ZSU1 146 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 ZNF329Q86UD4 541 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 FAM223AQ8IWN6 122 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 GBGT1Q8N5D6 347 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 RNF152Q8N8N0 203 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 NECAP1Q8NC96 275 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 ZNF738Q8NE65 137 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 LINC01006Q8NI28 216 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 MYOZ3Q8TDC0 251 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 NPIPB3Q92617 1050 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 SMIM12Q96EX1 92 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 USMG5Q96IX5 58 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 SLC35E1Q96K37 410 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 TXN2Q99757 166 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 SMIM7Q9BQ49 75 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 MLST8Q9BVC4 326 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 SAMD10Q9BYL1 202 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 SDF2L1Q9HCN8 221 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms