RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 HIST1H1AQ02539 215 aaPredicted RBP4.21□□□□□ -1.74
CD44-237ENST00000534082 DAZ2Q13117 558 aaKnown RBP4.21□□□□□ -1.74
CD44-237ENST00000534082 SPHARQ15513 63 aa4.21□□□□□ -1.74
CD44-237ENST00000534082 MRPL23Q16540 153 aaKnown RBP4.21□□□□□ -1.74
CD44-237ENST00000534082 HOGA1Q86XE5 327 aa4.21□□□□□ -1.74
CD44-237ENST00000534082 RNF182Q8N6D2 247 aa4.21□□□□□ -1.74
CD44-237ENST00000534082 CCDC197Q8NCU1 140 aa4.21□□□□□ -1.74
CD44-237ENST00000534082 ZNF738Q8NE65 137 aa4.21□□□□□ -1.74
CD44-237ENST00000534082 NPIPB3Q92617 1050 aa4.21□□□□□ -1.74
CD44-237ENST00000534082 UFD1Q92890 307 aa4.21□□□□□ -1.74
CD44-237ENST00000534082 PDCD10Q9BUL8 212 aa4.21□□□□□ -1.74
CD44-237ENST00000534082 MND1Q9BWT6 205 aa4.21□□□□□ -1.74
CD44-237ENST00000534082 FXYD6Q9H0Q3 95 aa4.21□□□□□ -1.74
CD44-237ENST00000534082 VCXQ9H320 206 aa4.21□□□□□ -1.74
CD44-237ENST00000534082 ENY2Q9NPA8 101 aa4.21□□□□□ -1.74
CD44-237ENST00000534082 CACNG5Q9UF02 275 aa4.21□□□□□ -1.74
CD44-237ENST00000534082 PSORS1C1Q9UIG5 152 aa4.21□□□□□ -1.74
CD44-237ENST00000534082 LSM2Q9Y333 95 aaKnown RBP4.21□□□□□ -1.74
CD44-237ENST00000534082 RBFOX3A6NFN3 312 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 GPR31O00270 319 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 NDUFS6O75380 124 aaKnown RBP4.2□□□□□ -1.74
CD44-237ENST00000534082 IGHV3-53P01767 116 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 OR5AC1P0C628 307 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 RAB4AP20338 218 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 SRIP30626 198 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 CDKN1BP46527 198 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 GALR1P47211 349 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 RAB4BP61018 213 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 LYZP61626 148 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 ZNF415Q09FC8 603 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 TDRG1Q3Y452 100 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 PHLDA2Q53GA4 152 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 IDNKQ5T6J7 187 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 Q6ZNX1 250 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 CLRN3Q8NCR9 226 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 LHFPL5Q8TAF8 219 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 RRNAD1Q96FB5 475 aaKnown RBP4.2□□□□□ -1.74
CD44-237ENST00000534082 PAXXQ9BUH6 204 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 SLC25A32Q9H2D1 315 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 DPH3P1Q9H4G8 78 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 PRO0255Q9UI72 69 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 FUT9Q9Y231 359 aa4.2□□□□□ -1.74
CD44-237ENST00000534082 TRGV1A0A0A0MS02 117 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 TRAV8-2A0A0B4J237 113 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 IGHV3-38A0A0C4DH36 116 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 RAB19A4D1S5 217 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 PDCD5O14737 125 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 PRAF2O60831 178 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 SCGNO76038 276 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 IGKV1-5P01602 117 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 GYPEP15421 78 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 PSMA1P25786 263 aaKnown RBP4.19□□□□□ -1.74
CD44-237ENST00000534082 CRYBA4P53673 196 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 SPCS3P61009 180 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 FABP5Q01469 135 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 OR2F1Q13607 317 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 TRAM1Q15629 374 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 PSG3Q16557 428 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 GAGE13Q4V321 117 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 LINC01556Q5JQF7 62 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 GFI1BQ5VTD9 330 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 MORN5Q5VZ52 161 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 TBC1D26Q86UD7 250 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 OR5AP2Q8NGF4 316 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 OR8A1Q8NGG7 326 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 RNASEH2CQ8TDP1 164 aaKnown RBP4.19□□□□□ -1.74
CD44-237ENST00000534082 IL22RA2Q969J5 263 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 C20orf144Q9BQM9 153 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 ZNF2Q9BSG1 426 aaPredicted RBP4.19□□□□□ -1.74
CD44-237ENST00000534082 RSG1Q9BU20 258 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 EHFQ9NZC4 300 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 CRCT1Q9UGL9 99 aa4.19□□□□□ -1.74
CD44-237ENST00000534082 A4D1N5 150 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 C5orf51A6NDU8 294 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 K7EQD1 137 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 S100GP29377 79 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 TNFSF8P32971 234 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 AKR1C2P52895 323 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 SCAND1P57086 179 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 TAS2R20P59543 309 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 ZNF90Q03938 601 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 CD300CQ08708 224 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 SLAQ13239 276 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 ETFRF1Q6IPR1 90 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 LAIR2Q6ISS4 152 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 C9orf47Q6ZRZ4 202 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 CROCCP3Q8IVE0 287 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 ARRDC1Q8N5I2 433 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 CYGBQ8WWM9 190 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 ST6GAL2Q96JF0 529 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 TM2D2Q9BX73 214 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 PARD6GQ9BYG4 376 aaPredicted RBP4.18□□□□□ -1.74
CD44-237ENST00000534082 SLC25A22Q9H936 323 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 DIABLOQ9NR28 239 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 HHLA3Q9XRX5 114 aa4.18□□□□□ -1.74
CD44-237ENST00000534082 TRAV1-2A0A0B4J238 106 aa4.17□□□□□ -1.74
CD44-237ENST00000534082 SMIM30A4D0T7 59 aa4.17□□□□□ -1.74
CD44-237ENST00000534082 ZFP92A6NM28 416 aa4.17□□□□□ -1.74
CD44-237ENST00000534082 E5RGE8 158 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms