RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 SLC25A21Q9BQT8 299 aaPredicted RBP12.55□□□□□ -0.4
UBXN1-216ENST00000533908 NOP10Q9NPE3 64 aaKnown RBP12.55□□□□□ -0.4
UBXN1-216ENST00000533908 APOBP04114 4563 aaKnown RBP12.55□□□□□ -0.4
UBXN1-216ENST00000533908 SNRPCP09234 159 aaKnown RBP12.54□□□□□ -0.4
UBXN1-216ENST00000533908 TMEM256Q8N2U0 113 aa12.54□□□□□ -0.4
UBXN1-216ENST00000533908 RNASE8Q8TDE3 154 aaKnown RBP12.54□□□□□ -0.4
UBXN1-216ENST00000533908 PSENENQ9NZ42 101 aa12.54□□□□□ -0.4
UBXN1-216ENST00000533908 TIMM8BQ9Y5J9 83 aaPredicted RBP12.54□□□□□ -0.4
UBXN1-216ENST00000533908 S100A7P31151 101 aa12.53□□□□□ -0.4
UBXN1-216ENST00000533908 RRAS2P62070 204 aaPredicted RBP12.53□□□□□ -0.4
UBXN1-216ENST00000533908 RPUSD4Q96CM3 377 aaKnown RBP12.53□□□□□ -0.4
UBXN1-216ENST00000533908 C16orf74Q96GX8 76 aa12.53□□□□□ -0.4
UBXN1-216ENST00000533908 PARD6GQ9BYG4 376 aaPredicted RBP12.53□□□□□ -0.4
UBXN1-216ENST00000533908 Q9H8V8 135 aa12.53□□□□□ -0.4
UBXN1-216ENST00000533908 C9orf170A2RU37 121 aa12.52□□□□□ -0.41
UBXN1-216ENST00000533908 PRAC2D3DTV9 90 aa12.52□□□□□ -0.41
UBXN1-216ENST00000533908 AP3S2P59780 193 aa12.52□□□□□ -0.41
UBXN1-216ENST00000533908 SPATA12Q7Z6I5 190 aa12.52□□□□□ -0.41
UBXN1-216ENST00000533908 LINC00612Q8N6U2 182 aa12.52□□□□□ -0.41
UBXN1-216ENST00000533908 SMIM8Q96KF7 97 aa12.52□□□□□ -0.41
UBXN1-216ENST00000533908 ARL6Q9H0F7 186 aa12.52□□□□□ -0.41
UBXN1-216ENST00000533908 PPP1R14DQ9NXH3 145 aa12.52□□□□□ -0.41
UBXN1-216ENST00000533908 HOXA5P20719 270 aa12.51□□□□□ -0.41
UBXN1-216ENST00000533908 CDKN1BP46527 198 aa12.51□□□□□ -0.41
UBXN1-216ENST00000533908 SELENOTP62341 195 aa12.51□□□□□ -0.41
UBXN1-216ENST00000533908 OR5I1Q13606 314 aa12.51□□□□□ -0.41
UBXN1-216ENST00000533908 CLINT1Q14677 625 aa12.51□□□□□ -0.41
UBXN1-216ENST00000533908 ZNF493Q6ZR52 646 aa12.51□□□□□ -0.41
UBXN1-216ENST00000533908 ZBTB8BQ8NAP8 495 aaPredicted RBP12.51□□□□□ -0.41
UBXN1-216ENST00000533908 LRRC20Q8TCA0 184 aa12.51□□□□□ -0.41
UBXN1-216ENST00000533908 ARV1Q9H2C2 271 aa12.51□□□□□ -0.41
UBXN1-216ENST00000533908 TRAV26-1A0A087WT03 109 aa12.5□□□□□ -0.41
UBXN1-216ENST00000533908 K7EPK0 472 aa12.5□□□□□ -0.41
UBXN1-216ENST00000533908 SSSCA1O60232 199 aa12.5□□□□□ -0.41
UBXN1-216ENST00000533908 METTL15P1P0C7V9 234 aa12.5□□□□□ -0.41
UBXN1-216ENST00000533908 KRTAP10-2P60368 255 aa12.5□□□□□ -0.41
UBXN1-216ENST00000533908 DLK1P80370 383 aa12.5□□□□□ -0.41
UBXN1-216ENST00000533908 SLC38A11Q08AI6 406 aa12.5□□□□□ -0.41
UBXN1-216ENST00000533908 ESRGQ1W209 222 aa12.5□□□□□ -0.41
UBXN1-216ENST00000533908 MORN5Q5VZ52 161 aa12.5□□□□□ -0.41
UBXN1-216ENST00000533908 TMEM14EPQ6UXP3 125 aa12.5□□□□□ -0.41
UBXN1-216ENST00000533908 Q8N1X5 172 aa12.5□□□□□ -0.41
UBXN1-216ENST00000533908 TMEM263Q8WUH6 116 aaKnown RBP12.5□□□□□ -0.41
UBXN1-216ENST00000533908 NPVFQ9HCQ7 196 aa12.5□□□□□ -0.41
UBXN1-216ENST00000533908 ZNF331Q9NQX6 463 aaPredicted RBP12.5□□□□□ -0.41
UBXN1-216ENST00000533908 FLVCR2Q9UPI3 526 aa12.5□□□□□ -0.41
UBXN1-216ENST00000533908 A0A0J9YY99 117 aa12.49□□□□□ -0.41
UBXN1-216ENST00000533908 H3BTX0 84 aa12.49□□□□□ -0.41
UBXN1-216ENST00000533908 H7BYZ3 331 aa12.49□□□□□ -0.41
UBXN1-216ENST00000533908 ZNF701M0R085 212 aaPredicted RBP12.49□□□□□ -0.41
UBXN1-216ENST00000533908 ANXA7P20073 488 aaKnown RBP12.49□□□□□ -0.41
UBXN1-216ENST00000533908 ARL16Q0P5N6 197 aa12.49□□□□□ -0.41
UBXN1-216ENST00000533908 GNPNAT1Q96EK6 184 aaPredicted RBP12.49□□□□□ -0.41
UBXN1-216ENST00000533908 DNAH5Q8TE73 4624 aa12.49□□□□□ -0.41
UBXN1-216ENST00000533908 SLC17A3O00476 420 aa12.48□□□□□ -0.41
UBXN1-216ENST00000533908 GFI1BQ5VTD9 330 aa12.48□□□□□ -0.41
UBXN1-216ENST00000533908 RXFP4Q8TDU9 374 aa12.48□□□□□ -0.41
UBXN1-216ENST00000533908 GAGE12BA1L429 117 aa12.47□□□□□ -0.41
UBXN1-216ENST00000533908 GAGE7O76087 117 aa12.47□□□□□ -0.41
UBXN1-216ENST00000533908 GAGE12FP0CL80 117 aa12.47□□□□□ -0.41
UBXN1-216ENST00000533908 GAGE12GP0CL81 117 aa12.47□□□□□ -0.41
UBXN1-216ENST00000533908 GAGE12IP0CL82 117 aa12.47□□□□□ -0.41
UBXN1-216ENST00000533908 UBE2MP61081 183 aaKnown RBP12.47□□□□□ -0.41
UBXN1-216ENST00000533908 TEPPQ6URK8 271 aa12.47□□□□□ -0.41
UBXN1-216ENST00000533908 LINC00305Q7Z4B0 112 aa12.47□□□□□ -0.41
UBXN1-216ENST00000533908 CCDC190Q86UF4 302 aa12.47□□□□□ -0.41
UBXN1-216ENST00000533908 DEDD2Q8WXF8 326 aa12.47□□□□□ -0.41
UBXN1-216ENST00000533908 TMEM37Q8WXS4 190 aa12.47□□□□□ -0.41
UBXN1-216ENST00000533908 SCRT2Q9NQ03 307 aa12.47□□□□□ -0.41
UBXN1-216ENST00000533908 LINC00854A0A1B0GVQ3 168 aa12.46□□□□□ -0.41
UBXN1-216ENST00000533908 FNDC10F2Z333 226 aa12.46□□□□□ -0.41
UBXN1-216ENST00000533908 H3BQ15 152 aa12.46□□□□□ -0.41
UBXN1-216ENST00000533908 M6PRP20645 277 aa12.46□□□□□ -0.41
UBXN1-216ENST00000533908 LCN15Q6UWW0 184 aa12.46□□□□□ -0.41
UBXN1-216ENST00000533908 OR10P1Q8NGE3 313 aa12.46□□□□□ -0.41
UBXN1-216ENST00000533908 OR10J6PQ8NGY7 276 aa12.46□□□□□ -0.41
UBXN1-216ENST00000533908 ZNF503Q96F45 646 aa12.46□□□□□ -0.41
UBXN1-216ENST00000533908 C20orf144Q9BQM9 153 aa12.46□□□□□ -0.41
UBXN1-216ENST00000533908 Q9H3A6 140 aa12.46□□□□□ -0.41
UBXN1-216ENST00000533908 AGPAT2O15120 278 aa12.45□□□□□ -0.42
UBXN1-216ENST00000533908 NDUFB6O95139 128 aa12.45□□□□□ -0.42
UBXN1-216ENST00000533908 CXCL2P19875 107 aa12.45□□□□□ -0.42
UBXN1-216ENST00000533908 SAT2Q96F10 170 aaPredicted RBP12.45□□□□□ -0.42
UBXN1-216ENST00000533908 UPK3BQ9BT76 320 aa12.45□□□□□ -0.42
UBXN1-216ENST00000533908 J3KRW8 73 aa12.44□□□□□ -0.42
UBXN1-216ENST00000533908 GOSR2O14653 212 aa12.44□□□□□ -0.42
UBXN1-216ENST00000533908 NOL3O60936 208 aaKnown RBP12.44□□□□□ -0.42
UBXN1-216ENST00000533908 OR4E1P0C645 316 aa12.44□□□□□ -0.42
UBXN1-216ENST00000533908 CT45A10P0DMU9 189 aa12.44□□□□□ -0.42
UBXN1-216ENST00000533908 OPCMLQ14982 345 aa12.44□□□□□ -0.42
UBXN1-216ENST00000533908 BAK1Q16611 211 aa12.44□□□□□ -0.42
UBXN1-216ENST00000533908 MGST2Q99735 147 aa12.44□□□□□ -0.42
UBXN1-216ENST00000533908 SLC50A1Q9BRV3 221 aa12.44□□□□□ -0.42
UBXN1-216ENST00000533908 SRRQ9GZT4 340 aa12.44□□□□□ -0.42
UBXN1-216ENST00000533908 RCL1Q9Y2P8 373 aaKnown RBP12.44□□□□□ -0.42
UBXN1-216ENST00000533908 TRAV5A0A0B4J249 113 aa12.43□□□□□ -0.42
UBXN1-216ENST00000533908 TRAV12-3A0A0B4J271 114 aa12.43□□□□□ -0.42
UBXN1-216ENST00000533908 TSC22D2O75157 780 aa12.43□□□□□ -0.42
UBXN1-216ENST00000533908 SCGB1D2O95969 90 aa12.43□□□□□ -0.42
UBXN1-216ENST00000533908 IGLC2P0DOY2 106 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms