RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 ZNF431Q8TF32 576 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-215ENST00000533818 RMI2Q96E14 147 aa6.67□□□□□ -1.34
CSDE1-215ENST00000533818 DPH3Q96FX2 82 aa6.67□□□□□ -1.34
CSDE1-215ENST00000533818 ZNF479Q96JC4 524 aa6.67□□□□□ -1.34
CSDE1-215ENST00000533818 LSM2Q9Y333 95 aaKnown RBP6.67□□□□□ -1.34
CSDE1-215ENST00000533818 IGKV2D-24A0A075B6R9 120 aa6.66□□□□□ -1.34
CSDE1-215ENST00000533818 TRAV18A0A075B6X5 111 aa6.66□□□□□ -1.34
CSDE1-215ENST00000533818 IGKV1OR2-108A0A075B7D4 117 aa6.66□□□□□ -1.34
CSDE1-215ENST00000533818 ATG12O94817 140 aa6.66□□□□□ -1.34
CSDE1-215ENST00000533818 TRIM16LQ309B1 348 aa6.66□□□□□ -1.34
CSDE1-215ENST00000533818 C14orf177Q52M58 125 aa6.66□□□□□ -1.34
CSDE1-215ENST00000533818 LPCAT3Q6P1A2 487 aa6.66□□□□□ -1.34
CSDE1-215ENST00000533818 DAZ4Q86SG3 579 aaKnown RBP6.66□□□□□ -1.34
CSDE1-215ENST00000533818 FAM219AQ8IW50 185 aa6.66□□□□□ -1.34
CSDE1-215ENST00000533818 C10orf67Q8IYJ2 551 aa6.66□□□□□ -1.34
CSDE1-215ENST00000533818 EIF4E3Q8N5X7 224 aaKnown RBP6.66□□□□□ -1.34
CSDE1-215ENST00000533818 DAZ3Q9NR90 486 aaKnown RBP6.66□□□□□ -1.34
CSDE1-215ENST00000533818 VAX2Q9UIW0 290 aa6.66□□□□□ -1.34
CSDE1-215ENST00000533818 SLC45A2Q9UMX9 530 aa6.66□□□□□ -1.34
CSDE1-215ENST00000533818 TRAV1-2A0A0B4J238 106 aa6.65□□□□□ -1.34
CSDE1-215ENST00000533818 MEIS3P1A6NDR6 274 aa6.65□□□□□ -1.34
CSDE1-215ENST00000533818 CRYM-AS1A6NIL9 109 aa6.65□□□□□ -1.34
CSDE1-215ENST00000533818 CEBPZOSA8MTT3 80 aa6.65□□□□□ -1.34
CSDE1-215ENST00000533818 GGTLC3B5MD39 225 aa6.65□□□□□ -1.34
CSDE1-215ENST00000533818 GABARAPH6UMI1 98 aa6.65□□□□□ -1.34
CSDE1-215ENST00000533818 GABARAPO95166 117 aa6.65□□□□□ -1.34
CSDE1-215ENST00000533818 PMP2P02689 132 aa6.65□□□□□ -1.34
CSDE1-215ENST00000533818 RAB3BP20337 219 aa6.65□□□□□ -1.34
CSDE1-215ENST00000533818 LEPP41159 167 aa6.65□□□□□ -1.34
CSDE1-215ENST00000533818 PRR4Q16378 134 aa6.65□□□□□ -1.34
CSDE1-215ENST00000533818 TEPPQ6URK8 271 aa6.65□□□□□ -1.34
CSDE1-215ENST00000533818 ZC2HC1AQ96GY0 325 aa6.65□□□□□ -1.34
CSDE1-215ENST00000533818 ACOT13Q9NPJ3 140 aa6.65□□□□□ -1.34
CSDE1-215ENST00000533818 NAT1P18440 290 aa6.64□□□□□ -1.35
CSDE1-215ENST00000533818 ORM2P19652 201 aa6.64□□□□□ -1.35
CSDE1-215ENST00000533818 GNGT1P63211 74 aa6.64□□□□□ -1.35
CSDE1-215ENST00000533818 IBA57Q5T440 356 aaKnown RBP6.64□□□□□ -1.35
CSDE1-215ENST00000533818 GGNBP1Q5YKI7 109 aa6.64□□□□□ -1.35
CSDE1-215ENST00000533818 SPINK6Q6UWN8 80 aa6.64□□□□□ -1.35
CSDE1-215ENST00000533818 SDIM1Q6ZPB5 146 aa6.64□□□□□ -1.35
CSDE1-215ENST00000533818 CCDC197Q8NCU1 140 aa6.64□□□□□ -1.35
CSDE1-215ENST00000533818 RNASE11Q8TAA1 199 aaKnown RBP6.64□□□□□ -1.35
CSDE1-215ENST00000533818 C7orf33Q8WU49 177 aa6.64□□□□□ -1.35
CSDE1-215ENST00000533818 TRGV9Q99603 122 aa6.64□□□□□ -1.35
CSDE1-215ENST00000533818 TMEM147Q9BVK8 224 aa6.64□□□□□ -1.35
CSDE1-215ENST00000533818 IFT46Q9NQC8 304 aa6.64□□□□□ -1.35
CSDE1-215ENST00000533818 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-215ENST00000533818 A0A0G2JRQ6 117 aa6.63□□□□□ -1.35
CSDE1-215ENST00000533818 LINC00854A0A1B0GVQ3 168 aa6.63□□□□□ -1.35
CSDE1-215ENST00000533818 CFDP00746 253 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-215ENST00000533818 PFN1P07737 140 aaKnown RBP6.63□□□□□ -1.35
CSDE1-215ENST00000533818 CT45A10P0DMU9 189 aa6.63□□□□□ -1.35
CSDE1-215ENST00000533818 MYL9P24844 172 aa6.63□□□□□ -1.35
CSDE1-215ENST00000533818 S100A7P31151 101 aa6.63□□□□□ -1.35
CSDE1-215ENST00000533818 NMSQ5H8A3 153 aa6.63□□□□□ -1.35
CSDE1-215ENST00000533818 LAIR2Q6ISS4 152 aa6.63□□□□□ -1.35
CSDE1-215ENST00000533818 C9orf163Q8N9P6 203 aa6.63□□□□□ -1.35
CSDE1-215ENST00000533818 OR10G4Q8NGN3 311 aa6.63□□□□□ -1.35
CSDE1-215ENST00000533818 OR5H2Q8NGV7 314 aa6.63□□□□□ -1.35
CSDE1-215ENST00000533818 CYGBQ8WWM9 190 aa6.63□□□□□ -1.35
CSDE1-215ENST00000533818 SLC35E1Q96K37 410 aa6.63□□□□□ -1.35
CSDE1-215ENST00000533818 MED4Q9NPJ6 270 aa6.63□□□□□ -1.35
CSDE1-215ENST00000533818 PLCXD1Q9NUJ7 323 aa6.63□□□□□ -1.35
CSDE1-215ENST00000533818 TP53TG3Q9ULZ0 132 aa6.63□□□□□ -1.35
CSDE1-215ENST00000533818 SMIM30A4D0T7 59 aa6.62□□□□□ -1.35
CSDE1-215ENST00000533818 C7orf71A4D174 169 aa6.62□□□□□ -1.35
CSDE1-215ENST00000533818 PRAC2D3DTV9 90 aa6.62□□□□□ -1.35
CSDE1-215ENST00000533818 SLC25A5P05141 298 aaKnown RBP6.62□□□□□ -1.35
CSDE1-215ENST00000533818 RPL7P18124 248 aaKnown RBP6.62□□□□□ -1.35
CSDE1-215ENST00000533818 GPX4P36969 197 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-215ENST00000533818 PRR3P79522 188 aaKnown RBP6.62□□□□□ -1.35
CSDE1-215ENST00000533818 AARDQ4LEZ3 155 aa6.62□□□□□ -1.35
CSDE1-215ENST00000533818 DPPA3Q6W0C5 159 aa6.62□□□□□ -1.35
CSDE1-215ENST00000533818 OR10P1Q8NGE3 313 aa6.62□□□□□ -1.35
CSDE1-215ENST00000533818 DNAJC30Q96LL9 226 aa6.62□□□□□ -1.35
CSDE1-215ENST00000533818 AUNIPQ9H7T9 357 aa6.62□□□□□ -1.35
CSDE1-215ENST00000533818 FKBP14Q9NWM8 211 aa6.62□□□□□ -1.35
CSDE1-215ENST00000533818 RHBDL2Q9NX52 303 aa6.62□□□□□ -1.35
CSDE1-215ENST00000533818 A0A087WYN8 130 aa6.61□□□□□ -1.35
CSDE1-215ENST00000533818 TAAR5O14804 337 aa6.61□□□□□ -1.35
CSDE1-215ENST00000533818 TAS2R46P59540 309 aa6.61□□□□□ -1.35
CSDE1-215ENST00000533818 CIRBPQ14011 172 aaKnown RBP6.61□□□□□ -1.35
CSDE1-215ENST00000533818 VWC2Q2TAL6 325 aa6.61□□□□□ -1.35
CSDE1-215ENST00000533818 DGAT2L7PQ6IED9 249 aa6.61□□□□□ -1.35
CSDE1-215ENST00000533818 ODF3Q96PU9 254 aa6.61□□□□□ -1.35
CSDE1-215ENST00000533818 TP53RKQ96S44 253 aa6.61□□□□□ -1.35
CSDE1-215ENST00000533818 SSR3Q9UNL2 185 aa6.61□□□□□ -1.35
CSDE1-215ENST00000533818 A0A087X0K7 114 aa6.6□□□□□ -1.35
CSDE1-215ENST00000533818 PTGES3LE9PB15 166 aa6.6□□□□□ -1.35
CSDE1-215ENST00000533818 H7C1H1 209 aa6.6□□□□□ -1.35
CSDE1-215ENST00000533818 MPDU1O75352 247 aa6.6□□□□□ -1.35
CSDE1-215ENST00000533818 BPIFCQ8NFQ6 507 aa6.6□□□□□ -1.35
CSDE1-215ENST00000533818 RNF185Q96GF1 192 aa6.6□□□□□ -1.35
CSDE1-215ENST00000533818 C2orf50Q96LR7 162 aa6.6□□□□□ -1.35
CSDE1-215ENST00000533818 U3KQ87 197 aa6.6□□□□□ -1.35
CSDE1-215ENST00000533818 FABP12A6NFH5 140 aa6.59□□□□□ -1.35
CSDE1-215ENST00000533818 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-215ENST00000533818 H3BRN7 92 aa6.59□□□□□ -1.35
CSDE1-215ENST00000533818 RGS13O14921 159 aa6.59□□□□□ -1.35
CSDE1-215ENST00000533818 RNASE4P34096 147 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms