RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 FAM167A-AS1Q96KT0 104 aa8.4□□□□□ -1.06
CCDC90B-218ENST00000533761 SEC11CQ9BY50 192 aa8.4□□□□□ -1.06
CCDC90B-218ENST00000533761 ZNF320A2RRD8 509 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 F8W036 122 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 OR10J4P0C629 311 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 HIST1H1EP10412 219 aaKnown RBP8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 CD28P10747 220 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 ATF4P18848 351 aaPredicted RBP8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 TCTEX1D4Q5JR98 221 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 LCNL1Q6ZST4 164 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 RXFP4Q8TDU9 374 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 DPF1Q92782 380 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 RPUSD4Q96CM3 377 aaKnown RBP8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 CITED1Q99966 193 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 CITED2Q99967 270 aaPredicted RBP8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 SCRT1Q9BWW7 348 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 TMPRSS5Q9H3S3 457 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 TSSC4Q9Y5U2 329 aaPredicted RBP8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 STAB1Q9NY15 2570 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 IGHV3-35A0A0C4DH35 117 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 K7EMT4 169 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 NBEAP1P0C6P0 100 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 GP9P14770 177 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 CRYBB3P26998 211 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 KRTAP10-3P60369 221 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 UBE2G2P60604 165 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 ICAM4Q14773 271 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 FAM74A3Q4VXF1 159 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 SAMD13Q5VXD3 122 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 LYPD1Q8N2G4 141 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 SVBPQ8N300 66 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 OR5B12Q96R08 314 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 RARRES2Q99969 163 aa8.39□□□□□ -1.07
CCDC90B-218ENST00000533761 TRAV5A0A0B4J249 113 aa8.38□□□□□ -1.07
CCDC90B-218ENST00000533761 FAM74A7A6NL05 159 aa8.38□□□□□ -1.07
CCDC90B-218ENST00000533761 M0QZ24 198 aa8.38□□□□□ -1.07
CCDC90B-218ENST00000533761 LGALS9O00182 355 aa8.38□□□□□ -1.07
CCDC90B-218ENST00000533761 BUB3O43684 328 aa8.38□□□□□ -1.07
CCDC90B-218ENST00000533761 EIF3GO75821 320 aaKnown RBP eCLIP8.38□□□□□ -1.07
CCDC90B-218ENST00000533761 PSG9Q00887 426 aa8.38□□□□□ -1.07
CCDC90B-218ENST00000533761 KIAA0141Q14154 515 aaPredicted RBP8.38□□□□□ -1.07
CCDC90B-218ENST00000533761 NDUFA11Q86Y39 141 aa8.38□□□□□ -1.07
CCDC90B-218ENST00000533761 C1QL4Q86Z23 238 aa8.38□□□□□ -1.07
CCDC90B-218ENST00000533761 KLHL30-AS1Q8NEE0 82 aa8.38□□□□□ -1.07
CCDC90B-218ENST00000533761 FXYD5Q96DB9 178 aa8.38□□□□□ -1.07
CCDC90B-218ENST00000533761 NIPSNAP3BQ9BS92 247 aa8.38□□□□□ -1.07
CCDC90B-218ENST00000533761 AAMDCQ9H7C9 122 aa8.38□□□□□ -1.07
CCDC90B-218ENST00000533761 HELTA6NFD8 242 aa8.37□□□□□ -1.07
CCDC90B-218ENST00000533761 LINC01619G3V211 115 aa8.37□□□□□ -1.07
CCDC90B-218ENST00000533761 ZNF253O75346 499 aa8.37□□□□□ -1.07
CCDC90B-218ENST00000533761 TRBV12-3P01733 135 aa8.37□□□□□ -1.07
CCDC90B-218ENST00000533761 PYYP10082 97 aa8.37□□□□□ -1.07
CCDC90B-218ENST00000533761 CEBPGP53567 150 aa8.37□□□□□ -1.07
CCDC90B-218ENST00000533761 MORN5Q5VZ52 161 aa8.37□□□□□ -1.07
CCDC90B-218ENST00000533761 LEMD1Q68G75 181 aa8.37□□□□□ -1.07
CCDC90B-218ENST00000533761 REC114Q7Z4M0 266 aa8.37□□□□□ -1.07
CCDC90B-218ENST00000533761 SPATA3Q8NHX4 192 aa8.37□□□□□ -1.07
CCDC90B-218ENST00000533761 CMTM2Q8TAZ6 248 aa8.37□□□□□ -1.07
CCDC90B-218ENST00000533761 BLNKQ8WV28 456 aa8.37□□□□□ -1.07
CCDC90B-218ENST00000533761 HIST1H2BAQ96A08 127 aa8.37□□□□□ -1.07
CCDC90B-218ENST00000533761 CLEC5AQ9NY25 188 aa8.37□□□□□ -1.07
CCDC90B-218ENST00000533761 PEMTQ9UBM1 199 aa8.37□□□□□ -1.07
CCDC90B-218ENST00000533761 A8MWP6 167 aa8.36□□□□□ -1.07
CCDC90B-218ENST00000533761 K7EQM0 130 aa8.36□□□□□ -1.07
CCDC90B-218ENST00000533761 SRP19P09132 144 aaKnown RBP8.36□□□□□ -1.07
CCDC90B-218ENST00000533761 CD81P60033 236 aa8.36□□□□□ -1.07
CCDC90B-218ENST00000533761 SRSF3P84103 164 aaKnown RBP8.36□□□□□ -1.07
CCDC90B-218ENST00000533761 CYB561D1Q8N8Q1 229 aa8.36□□□□□ -1.07
CCDC90B-218ENST00000533761 ZNF503Q96F45 646 aa8.36□□□□□ -1.07
CCDC90B-218ENST00000533761 CARHSP1Q9Y2V2 147 aaKnown RBP8.36□□□□□ -1.07
CCDC90B-218ENST00000533761 TRBV19A0A075B6N1 114 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 ZNF785A8K8V0 405 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 SNAPINO95295 136 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 APOC3P02656 99 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 IGLC2P0DOY2 106 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 HOXD3P31249 432 aaPredicted RBP8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 CSN1S1P47710 185 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 RANP62826 216 aaKnown RBP8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 PNRC1Q12796 327 aaPredicted RBP8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 SIGLEC15Q6ZMC9 328 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 C5orf17Q8NAS9 161 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 OR11H1Q8NG94 326 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 OR1N2Q8NGR9 330 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 SLC50A1Q9BRV3 221 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 OTORQ9NRC9 128 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 IGHV4OR15-8A0A075B7B6 117 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 IGHV3OR16-8A0A075B7F1 116 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 A0A087WW49 117 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 A0A087X0K7 114 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 IGHV7-4-1A0A0J9YVY3 117 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 SERTM2A0A1B0GWG4 89 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 A0A1W2PRX2 142 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 ZNF727A8MUV8 499 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 S100A9P06702 114 aaKnown RBP8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 ATP5G3P48201 142 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 SUMO1P63165 101 aaKnown RBP8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 UNQ9165/PRO28630Q6UXU0 137 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 LINC00052Q96N35 136 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 SMIM7Q9BQ49 75 aa8.35□□□□□ -1.07
CCDC90B-218ENST00000533761 YTHDF2Q9Y5A9 579 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms