RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 TRAV5A0A0B4J249 113 aa8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 F8W036 122 aa8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 K7EQG2 157 aa8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 APOC3P02656 99 aa8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 ATF4P18848 351 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 TAGLN2P37802 199 aaKnown RBP8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 ID1P41134 155 aa8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 MEOX2P50222 304 aa8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 RHOBP62745 196 aa8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 SAMD13Q5VXD3 122 aa8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 MORN5Q5VZ52 161 aa8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 FAM213BQ8TBF2 198 aa8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 FAM110AQ9BQ89 295 aa8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 MRPL32Q9BYC8 188 aaKnown RBP8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 TUBA4BQ9H853 241 aa8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 SEPSECSQ9HD40 501 aaKnown RBP8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 CARHSP1Q9Y2V2 147 aaKnown RBP8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 DNAH3Q8TD57 4116 aa8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 FBN3Q75N90 2809 aa8.39□□□□□ -1.07
TRAPPC4-211ENST00000533012 A0A1W2PPV4 95 aa8.38□□□□□ -1.07
TRAPPC4-211ENST00000533012 IFNA1P01562 189 aa8.38□□□□□ -1.07
TRAPPC4-211ENST00000533012 H2AFB1P0C5Y9 115 aa8.38□□□□□ -1.07
TRAPPC4-211ENST00000533012 SNRPD3P62318 126 aaKnown RBP8.38□□□□□ -1.07
TRAPPC4-211ENST00000533012 MIR17HGQ75NE6 70 aa8.38□□□□□ -1.07
TRAPPC4-211ENST00000533012 DEFB125Q8N687 156 aa8.38□□□□□ -1.07
TRAPPC4-211ENST00000533012 OR10G4Q8NGN3 311 aa8.38□□□□□ -1.07
TRAPPC4-211ENST00000533012 OR10G9Q8NGN4 311 aa8.38□□□□□ -1.07
TRAPPC4-211ENST00000533012 OR10G7Q8NGN6 311 aa8.38□□□□□ -1.07
TRAPPC4-211ENST00000533012 C16orf92Q96LL3 132 aa8.38□□□□□ -1.07
TRAPPC4-211ENST00000533012 SH3BGRL3Q9H299 93 aa8.38□□□□□ -1.07
TRAPPC4-211ENST00000533012 C19orf73Q9NVV2 129 aa8.38□□□□□ -1.07
TRAPPC4-211ENST00000533012 FUT9Q9Y231 359 aa8.38□□□□□ -1.07
TRAPPC4-211ENST00000533012 NOTCH1P46531 2555 aa8.38□□□□□ -1.07
TRAPPC4-211ENST00000533012 A0A087X0K7 114 aa8.37□□□□□ -1.07
TRAPPC4-211ENST00000533012 ZNF688P0C7X2 276 aa8.37□□□□□ -1.07
TRAPPC4-211ENST00000533012 IGHV4-30-4P0DP06 118 aa8.37□□□□□ -1.07
TRAPPC4-211ENST00000533012 TAS2R45P59539 299 aa8.37□□□□□ -1.07
TRAPPC4-211ENST00000533012 DEFB131AP59861 70 aa8.37□□□□□ -1.07
TRAPPC4-211ENST00000533012 GUK1Q16774 197 aa8.37□□□□□ -1.07
TRAPPC4-211ENST00000533012 SPATA31B1PQ5VZV4 182 aa8.37□□□□□ -1.07
TRAPPC4-211ENST00000533012 FAM24BQ8N5W8 94 aa8.37□□□□□ -1.07
TRAPPC4-211ENST00000533012 NKX6-2Q9C056 277 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC4-211ENST00000533012 EIF5A2Q9GZV4 153 aaKnown RBP8.37□□□□□ -1.07
TRAPPC4-211ENST00000533012 MAP6D1Q9H9H5 199 aa8.37□□□□□ -1.07
TRAPPC4-211ENST00000533012 TMEM14CQ9P0S9 112 aa8.37□□□□□ -1.07
TRAPPC4-211ENST00000533012 TRAV1-1A0A0B4J248 108 aa8.36□□□□□ -1.07
TRAPPC4-211ENST00000533012 A8MZ25 164 aa8.36□□□□□ -1.07
TRAPPC4-211ENST00000533012 ISLRO14498 428 aa8.36□□□□□ -1.07
TRAPPC4-211ENST00000533012 MRPS12O15235 138 aaKnown RBP8.36□□□□□ -1.07
TRAPPC4-211ENST00000533012 HIST1H1EP10412 219 aaKnown RBP8.36□□□□□ -1.07
TRAPPC4-211ENST00000533012 PSMB3P49720 205 aa8.36□□□□□ -1.07
TRAPPC4-211ENST00000533012 ODF3L2Q3SX64 289 aa8.36□□□□□ -1.07
TRAPPC4-211ENST00000533012 TMEM41BQ5BJD5 291 aa8.36□□□□□ -1.07
TRAPPC4-211ENST00000533012 C10orf91Q5T1B1 145 aa8.36□□□□□ -1.07
TRAPPC4-211ENST00000533012 FAM122CQ6P4D5 195 aa8.36□□□□□ -1.07
TRAPPC4-211ENST00000533012 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.36□□□□□ -1.07
TRAPPC4-211ENST00000533012 APRG1Q8IVJ8 170 aa8.36□□□□□ -1.07
TRAPPC4-211ENST00000533012 C17orf77Q96MU5 243 aa8.36□□□□□ -1.07
TRAPPC4-211ENST00000533012 SLC25A2Q9BXI2 301 aa8.36□□□□□ -1.07
TRAPPC4-211ENST00000533012 OR51M1Q9H341 326 aa8.36□□□□□ -1.07
TRAPPC4-211ENST00000533012 MEGF8Q7Z7M0 2845 aa8.35□□□□□ -1.07
TRAPPC4-211ENST00000533012 SOCS3O14543 225 aa8.35□□□□□ -1.07
TRAPPC4-211ENST00000533012 NDUFS6O75380 124 aaKnown RBP8.35□□□□□ -1.07
TRAPPC4-211ENST00000533012 SNRPCP09234 159 aaKnown RBP8.35□□□□□ -1.07
TRAPPC4-211ENST00000533012 IGLC2P0DOY2 106 aa8.35□□□□□ -1.07
TRAPPC4-211ENST00000533012 PPT1P50897 306 aa8.35□□□□□ -1.07
TRAPPC4-211ENST00000533012 KHDC3LQ587J8 217 aa8.35□□□□□ -1.07
TRAPPC4-211ENST00000533012 PSMG4Q5JS54 123 aa8.35□□□□□ -1.07
TRAPPC4-211ENST00000533012 LCN15Q6UWW0 184 aa8.35□□□□□ -1.07
TRAPPC4-211ENST00000533012 RPP25LQ8N5L8 163 aaKnown RBP8.35□□□□□ -1.07
TRAPPC4-211ENST00000533012 FAM167A-AS1Q96KT0 104 aa8.35□□□□□ -1.07
TRAPPC4-211ENST00000533012 PAXXQ9BUH6 204 aa8.35□□□□□ -1.07
TRAPPC4-211ENST00000533012 ACTR3CQ9C0K3 210 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC4-211ENST00000533012 WFDC10AQ9H1F0 79 aa8.35□□□□□ -1.07
TRAPPC4-211ENST00000533012 SRD5A3Q9H8P0 318 aa8.35□□□□□ -1.07
TRAPPC4-211ENST00000533012 RPRMQ9NS64 109 aa8.35□□□□□ -1.07
TRAPPC4-211ENST00000533012 H3BQ15 152 aa8.34□□□□□ -1.07
TRAPPC4-211ENST00000533012 OR7C2O60412 319 aa8.34□□□□□ -1.07
TRAPPC4-211ENST00000533012 NBEAP1P0C6P0 100 aa8.34□□□□□ -1.07
TRAPPC4-211ENST00000533012 SFTA3P0C7M3 94 aa8.34□□□□□ -1.07
TRAPPC4-211ENST00000533012 PYYP10082 97 aa8.34□□□□□ -1.07
TRAPPC4-211ENST00000533012 CDC34P49427 236 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC4-211ENST00000533012 SLC50A1Q9BRV3 221 aa8.34□□□□□ -1.07
TRAPPC4-211ENST00000533012 SLC35B3Q9H1N7 401 aa8.34□□□□□ -1.07
TRAPPC4-211ENST00000533012 ZNF586Q9NXT0 402 aa8.34□□□□□ -1.07
TRAPPC4-211ENST00000533012 CLEC5AQ9NY25 188 aa8.34□□□□□ -1.07
TRAPPC4-211ENST00000533012 SORL1Q92673 2214 aa8.33□□□□□ -1.08
TRAPPC4-211ENST00000533012 TRBV19A0A075B6N1 114 aa8.33□□□□□ -1.08
TRAPPC4-211ENST00000533012 LOC102724200A0A096LPH7 203 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC4-211ENST00000533012 TRAV8-2A0A0B4J237 113 aa8.33□□□□□ -1.08
TRAPPC4-211ENST00000533012 H3BTX0 84 aa8.33□□□□□ -1.08
TRAPPC4-211ENST00000533012 FRMD6-AS1P0C7T7 363 aa8.33□□□□□ -1.08
TRAPPC4-211ENST00000533012 PMS2P11Q13670 270 aa8.33□□□□□ -1.08
TRAPPC4-211ENST00000533012 ZNF124Q15973 351 aa8.33□□□□□ -1.08
TRAPPC4-211ENST00000533012 IGFL4Q6B9Z1 124 aa8.33□□□□□ -1.08
TRAPPC4-211ENST00000533012 PQLC2Q6ZP29 291 aa8.33□□□□□ -1.08
TRAPPC4-211ENST00000533012 STHQ8IWL8 128 aa8.33□□□□□ -1.08
TRAPPC4-211ENST00000533012 SFT2D1Q8WV19 159 aa8.33□□□□□ -1.08
TRAPPC4-211ENST00000533012 BLNKQ8WV28 456 aa8.33□□□□□ -1.08
TRAPPC4-211ENST00000533012 MBD3L1Q8WWY6 194 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms