RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 AP3S2P59780 193 aa11.92□□□□□ -0.5
CTSB-226ENST00000532656 PLP1P60201 277 aa11.92□□□□□ -0.5
CTSB-226ENST00000532656 RRAS2P62070 204 aaPredicted RBP11.92□□□□□ -0.5
CTSB-226ENST00000532656 POLR2GP62487 172 aaKnown RBP eCLIP11.92□□□□□ -0.5
CTSB-226ENST00000532656 PYDC2Q56P42 97 aa11.92□□□□□ -0.5
CTSB-226ENST00000532656 ZNF493Q6ZR52 646 aa11.92□□□□□ -0.5
CTSB-226ENST00000532656 TMEM263Q8WUH6 116 aaKnown RBP11.92□□□□□ -0.5
CTSB-226ENST00000532656 RPUSD4Q96CM3 377 aaKnown RBP11.92□□□□□ -0.5
CTSB-226ENST00000532656 GNPNAT1Q96EK6 184 aaPredicted RBP11.92□□□□□ -0.5
CTSB-226ENST00000532656 TRAV26-1A0A087WT03 109 aa11.91□□□□□ -0.5
CTSB-226ENST00000532656 A0A0J9YY99 117 aa11.91□□□□□ -0.5
CTSB-226ENST00000532656 ADAP1O75689 374 aa11.91□□□□□ -0.5
CTSB-226ENST00000532656 CCNKO75909 580 aa11.91□□□□□ -0.5
CTSB-226ENST00000532656 SNRPCP09234 159 aaKnown RBP11.91□□□□□ -0.5
CTSB-226ENST00000532656 TMBIM6P55061 237 aa11.91□□□□□ -0.5
CTSB-226ENST00000532656 KIR3DS1Q14943 382 aa11.91□□□□□ -0.5
CTSB-226ENST00000532656 OR10J6PQ8NGY7 276 aa11.91□□□□□ -0.5
CTSB-226ENST00000532656 MCFD2Q8NI22 146 aa11.91□□□□□ -0.5
CTSB-226ENST00000532656 SLC25A21Q9BQT8 299 aaPredicted RBP11.91□□□□□ -0.5
CTSB-226ENST00000532656 PARD6GQ9BYG4 376 aaPredicted RBP11.91□□□□□ -0.5
CTSB-226ENST00000532656 ARL6Q9H0F7 186 aa11.91□□□□□ -0.5
CTSB-226ENST00000532656 SCRT2Q9NQ03 307 aa11.91□□□□□ -0.5
CTSB-226ENST00000532656 PSENENQ9NZ42 101 aa11.91□□□□□ -0.5
CTSB-226ENST00000532656 PMS2P5A8MQ11 134 aa11.9□□□□□ -0.5
CTSB-226ENST00000532656 H7BYZ3 331 aa11.9□□□□□ -0.5
CTSB-226ENST00000532656 ANXA7P20073 488 aaKnown RBP11.9□□□□□ -0.5
CTSB-226ENST00000532656 KRTAP10-2P60368 255 aa11.9□□□□□ -0.5
CTSB-226ENST00000532656 SELENOTP62341 195 aa11.9□□□□□ -0.5
CTSB-226ENST00000532656 ID3Q02535 119 aa11.9□□□□□ -0.5
CTSB-226ENST00000532656 TTC32Q5I0X7 151 aa11.9□□□□□ -0.5
CTSB-226ENST00000532656 PATE2Q6UY27 113 aa11.9□□□□□ -0.5
CTSB-226ENST00000532656 BCL7BQ9BQE9 202 aa11.9□□□□□ -0.5
CTSB-226ENST00000532656 H3BMQ9 156 aa11.89□□□□□ -0.51
CTSB-226ENST00000532656 ZNF701M0R085 212 aaPredicted RBP11.89□□□□□ -0.51
CTSB-226ENST00000532656 MRPS12O15235 138 aaKnown RBP11.89□□□□□ -0.51
CTSB-226ENST00000532656 SSSCA1O60232 199 aa11.89□□□□□ -0.51
CTSB-226ENST00000532656 M6PRP20645 277 aa11.89□□□□□ -0.51
CTSB-226ENST00000532656 RXFP4Q8TDU9 374 aa11.89□□□□□ -0.51
CTSB-226ENST00000532656 ARV1Q9H2C2 271 aa11.89□□□□□ -0.51
CTSB-226ENST00000532656 Q9H3A6 140 aa11.89□□□□□ -0.51
CTSB-226ENST00000532656 DNAH5Q8TE73 4624 aa11.88□□□□□ -0.51
CTSB-226ENST00000532656 GAGE12BA1L429 117 aa11.88□□□□□ -0.51
CTSB-226ENST00000532656 GAGE7O76087 117 aa11.88□□□□□ -0.51
CTSB-226ENST00000532656 METTL15P1P0C7V9 234 aa11.88□□□□□ -0.51
CTSB-226ENST00000532656 GAGE12FP0CL80 117 aa11.88□□□□□ -0.51
CTSB-226ENST00000532656 GAGE12GP0CL81 117 aa11.88□□□□□ -0.51
CTSB-226ENST00000532656 GAGE12IP0CL82 117 aa11.88□□□□□ -0.51
CTSB-226ENST00000532656 HOXA5P20719 270 aa11.88□□□□□ -0.51
CTSB-226ENST00000532656 DLK1P80370 383 aa11.88□□□□□ -0.51
CTSB-226ENST00000532656 SLC38A11Q08AI6 406 aa11.88□□□□□ -0.51
CTSB-226ENST00000532656 S100A7AQ86SG5 101 aa11.88□□□□□ -0.51
CTSB-226ENST00000532656 ZNF331Q9NQX6 463 aaPredicted RBP11.88□□□□□ -0.51
CTSB-226ENST00000532656 J3KRW8 73 aa11.87□□□□□ -0.51
CTSB-226ENST00000532656 NOL3O60936 208 aaKnown RBP11.87□□□□□ -0.51
CTSB-226ENST00000532656 ESRGQ1W209 222 aa11.87□□□□□ -0.51
CTSB-226ENST00000532656 GFI1BQ5VTD9 330 aa11.87□□□□□ -0.51
CTSB-226ENST00000532656 LCN15Q6UWW0 184 aa11.87□□□□□ -0.51
CTSB-226ENST00000532656 CCDC190Q86UF4 302 aa11.87□□□□□ -0.51
CTSB-226ENST00000532656 CCDC28AQ8IWP9 274 aa11.87□□□□□ -0.51
CTSB-226ENST00000532656 LINC00612Q8N6U2 182 aa11.87□□□□□ -0.51
CTSB-226ENST00000532656 C20orf144Q9BQM9 153 aa11.87□□□□□ -0.51
CTSB-226ENST00000532656 NPVFQ9HCQ7 196 aa11.87□□□□□ -0.51
CTSB-226ENST00000532656 V9GYH0 126 aa11.87□□□□□ -0.51
CTSB-226ENST00000532656 C9orf170A2RU37 121 aa11.86□□□□□ -0.51
CTSB-226ENST00000532656 PRAC2D3DTV9 90 aa11.86□□□□□ -0.51
CTSB-226ENST00000532656 H3BTX0 84 aa11.86□□□□□ -0.51
CTSB-226ENST00000532656 SLC17A3O00476 420 aa11.86□□□□□ -0.51
CTSB-226ENST00000532656 RLN2P04090 185 aa11.86□□□□□ -0.51
CTSB-226ENST00000532656 CXCL2P19875 107 aa11.86□□□□□ -0.51
CTSB-226ENST00000532656 TEPPQ6URK8 271 aa11.86□□□□□ -0.51
CTSB-226ENST00000532656 LINC00305Q7Z4B0 112 aa11.86□□□□□ -0.51
CTSB-226ENST00000532656 ZNF503Q96F45 646 aa11.86□□□□□ -0.51
CTSB-226ENST00000532656 SMIM8Q96KF7 97 aa11.86□□□□□ -0.51
CTSB-226ENST00000532656 SLC50A1Q9BRV3 221 aa11.86□□□□□ -0.51
CTSB-226ENST00000532656 UPK3BQ9BT76 320 aa11.86□□□□□ -0.51
CTSB-226ENST00000532656 ZNF586Q9NXT0 402 aa11.86□□□□□ -0.51
CTSB-226ENST00000532656 MGAT4CQ9UBM8 478 aa11.86□□□□□ -0.51
CTSB-226ENST00000532656 SNURFLB1AK76 121 aa11.85□□□□□ -0.51
CTSB-226ENST00000532656 K7EPK0 472 aa11.85□□□□□ -0.51
CTSB-226ENST00000532656 TMEM14EPQ6UXP3 125 aa11.85□□□□□ -0.51
CTSB-226ENST00000532656 OR10P1Q8NGE3 313 aa11.85□□□□□ -0.51
CTSB-226ENST00000532656 RNF24Q9Y225 148 aa11.85□□□□□ -0.51
CTSB-226ENST00000532656 MRPS16Q9Y3D3 137 aaKnown RBP11.85□□□□□ -0.51
CTSB-226ENST00000532656 FNDC10F2Z333 226 aa11.84□□□□□ -0.51
CTSB-226ENST00000532656 GOSR2O14653 212 aa11.84□□□□□ -0.51
CTSB-226ENST00000532656 SCGB1D2O95969 90 aa11.84□□□□□ -0.51
CTSB-226ENST00000532656 BTF3P20290 206 aaKnown RBP11.84□□□□□ -0.51
CTSB-226ENST00000532656 UBE2MP61081 183 aaKnown RBP11.84□□□□□ -0.51
CTSB-226ENST00000532656 MORN5Q5VZ52 161 aa11.84□□□□□ -0.51
CTSB-226ENST00000532656 BPIFA4PQ86YQ2 179 aa11.84□□□□□ -0.51
CTSB-226ENST00000532656 DEDD2Q8WXF8 326 aa11.84□□□□□ -0.51
CTSB-226ENST00000532656 TMPRSS5Q9H3S3 457 aa11.84□□□□□ -0.51
CTSB-226ENST00000532656 LINC00854A0A1B0GVQ3 168 aa11.83□□□□□ -0.52
CTSB-226ENST00000532656 A0A1W2PPQ1 181 aa11.83□□□□□ -0.52
CTSB-226ENST00000532656 AGPAT2O15120 278 aa11.83□□□□□ -0.52
CTSB-226ENST00000532656 PXDC1Q5TGL8 231 aa11.83□□□□□ -0.52
CTSB-226ENST00000532656 ZNF546Q86UE3 836 aa11.83□□□□□ -0.52
CTSB-226ENST00000532656 ZBTB8BQ8NAP8 495 aaPredicted RBP11.83□□□□□ -0.52
CTSB-226ENST00000532656 FLVCR2Q9UPI3 526 aa11.83□□□□□ -0.52
CTSB-226ENST00000532656 TRAV12-3A0A0B4J271 114 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms