RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 SHANK2-AS3Q9BTD1 123 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 CLPSL1A2RUU4 121 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 HIGD1CA8MV81 97 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 PRSS2P07478 247 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 TMEM136Q6ZRR5 245 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 LGALS1P09382 135 aaKnown RBP6.31□□□□□ -1.4
CTNND1-230ENST00000532245 SRSF2Q01130 221 aaKnown RBP6.31□□□□□ -1.4
CTNND1-230ENST00000532245 C8orf31Q8N9H6 132 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 BBC3Q96PG8 261 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-230ENST00000532245 TRAV8-1A0A0A6YYK1 113 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 IGKV1-39P01597 117 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 IGKV1D-39P04432 117 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 CBLN1P23435 193 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 CCL20P78556 96 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 IQCJQ1A5X6 159 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 PRSS57Q6UWY2 283 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 TTC9CQ8N5M4 171 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 HSPB9Q9BQS6 159 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 SIRPDQ9H106 197 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 MRPL27Q9P0M9 148 aaKnown RBP6.31□□□□□ -1.4
CTNND1-230ENST00000532245 TOMM7Q9P0U1 55 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 F5H768 121 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 STAG3L2P0CL84 134 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 STAG3L3P0CL85 134 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 YPEL3P61236 119 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-230ENST00000532245 FOXE3Q13461 319 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 C9orf66Q5T8R8 295 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 HAPLN4Q86UW8 402 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 ST6GALNAC6Q969X2 333 aa6.31□□□□□ -1.4
CTNND1-230ENST00000532245 A0A087WX48 190 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 NMUP48645 174 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 HNRNPA3P51991 378 aaKnown RBP6.3□□□□□ -1.4
CTNND1-230ENST00000532245 DAD1P61803 113 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 IGHV7-81A0A0B4J1V7 117 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 PSCAO43653 123 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 TRGC2P03986 189 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 SRP19P09132 144 aaKnown RBP6.3□□□□□ -1.4
CTNND1-230ENST00000532245 GZMBP10144 247 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 FOLR2P14207 255 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 MALP21145 153 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 MEIG1Q5JSS6 88 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 PUSL1Q8N0Z8 303 aaKnown RBP6.3□□□□□ -1.4
CTNND1-230ENST00000532245 C18orf15Q96N68 181 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 IGKV3D-20A0A0C4DH25 116 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 PPP1R17O96001 155 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 TCRAP04437 139 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 ANKRD11Q6UB99 2663 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-230ENST00000532245 KLK9Q9UKQ9 250 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 H3BUA1 57 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 KRTAP10-9P60411 292 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 PAPPA-AS1Q5QFB9 102 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 RPP25LQ8N5L8 163 aaKnown RBP6.3□□□□□ -1.4
CTNND1-230ENST00000532245 CITED2Q99967 270 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-230ENST00000532245 ST20Q9HBF5 79 aa6.3□□□□□ -1.4
CTNND1-230ENST00000532245 IGHV7-4-1A0A0J9YVY3 117 aa6.29□□□□□ -1.4
CTNND1-230ENST00000532245 IL36BQ9NZH7 164 aa6.29□□□□□ -1.4
CTNND1-230ENST00000532245 TRAV12-2A0A075B6T6 113 aa6.29□□□□□ -1.4
CTNND1-230ENST00000532245 Q6AWC8 147 aa6.29□□□□□ -1.4
CTNND1-230ENST00000532245 C5orf56Q8N8D9 126 aa6.29□□□□□ -1.4
CTNND1-230ENST00000532245 Q8NFD4 153 aa6.29□□□□□ -1.4
CTNND1-230ENST00000532245 AGMATQ9BSE5 352 aa6.29□□□□□ -1.4
CTNND1-230ENST00000532245 PRR14LQ5THK1 2151 aa6.29□□□□□ -1.4
CTNND1-230ENST00000532245 LEPROTL1O95214 131 aa6.29□□□□□ -1.4
CTNND1-230ENST00000532245 GP9P14770 177 aa6.29□□□□□ -1.4
CTNND1-230ENST00000532245 ABCA2Q9BZC7 2435 aa6.29□□□□□ -1.4
CTNND1-230ENST00000532245 C2orf88Q9BSF0 95 aa6.29□□□□□ -1.4
CTNND1-230ENST00000532245 WIPF3A6NGB9 483 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 PSMB2P49721 201 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 FOXC2Q99958 501 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 CACNG7P62955 275 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 PRR31Q5SQ13 230 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 Q8N9W7 124 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 OR10AG1Q8NH19 301 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 OCC1Q8TAD7 63 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 SSBP4Q9BWG4 385 aaPredicted RBP6.28□□□□□ -1.4
CTNND1-230ENST00000532245 DSCAMO60469 2012 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 CEP350Q5VT06 3117 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 C7orf71A4D174 169 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 EVI2AP22794 236 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 TMEM170BQ5T4T1 132 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 IMMP2LQ96T52 175 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 PRRC2AP48634 2157 aaKnown RBP6.28□□□□□ -1.4
CTNND1-230ENST00000532245 LGALS3P17931 250 aaKnown RBP6.28□□□□□ -1.4
CTNND1-230ENST00000532245 COTL1Q14019 142 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 ANAPC10Q9UM13 185 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 SOX21Q9Y651 276 aaPredicted RBP6.28□□□□□ -1.4
CTNND1-230ENST00000532245 GCSHP23434 173 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 MED12LQ86YW9 2145 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 NPBQ8NG41 125 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 SCGB3A1Q96QR1 104 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 SMR3AQ99954 134 aa6.28□□□□□ -1.4
CTNND1-230ENST00000532245 SH2D1AO60880 128 aa6.27□□□□□ -1.41
CTNND1-230ENST00000532245 APOHP02749 345 aaPredicted RBP6.27□□□□□ -1.41
CTNND1-230ENST00000532245 GFI1BQ5VTD9 330 aa6.27□□□□□ -1.41
CTNND1-230ENST00000532245 TMEM70Q9BUB7 260 aa6.27□□□□□ -1.41
CTNND1-230ENST00000532245 IGHV4OR15-8A0A075B7B6 117 aa6.27□□□□□ -1.41
CTNND1-230ENST00000532245 A0A087WW49 117 aa6.27□□□□□ -1.41
CTNND1-230ENST00000532245 PAX9P55771 341 aa6.27□□□□□ -1.41
CTNND1-230ENST00000532245 RPL23P62829 140 aaKnown RBP6.27□□□□□ -1.41
CTNND1-230ENST00000532245 RPL36AP83881 106 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms