RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 LEMD1Q68G75 181 aa9.39□□□□□ -0.91
COPB1-208ENST00000532088 FAM122CQ6P4D5 195 aa9.39□□□□□ -0.91
COPB1-208ENST00000532088 RAB24Q969Q5 203 aa9.39□□□□□ -0.91
COPB1-208ENST00000532088 OR51M1Q9H341 326 aa9.39□□□□□ -0.91
COPB1-208ENST00000532088 HRH4Q9H3N8 390 aa9.39□□□□□ -0.91
COPB1-208ENST00000532088 TRAV5A0A0B4J249 113 aa9.38□□□□□ -0.91
COPB1-208ENST00000532088 ZNF785A8K8V0 405 aa9.38□□□□□ -0.91
COPB1-208ENST00000532088 IGLC2P0DOY2 106 aa9.38□□□□□ -0.91
COPB1-208ENST00000532088 HIST1H1EP10412 219 aaKnown RBP9.38□□□□□ -0.91
COPB1-208ENST00000532088 CMC4P56277 68 aaPredicted RBP9.38□□□□□ -0.91
COPB1-208ENST00000532088 PDE6HQ13956 83 aa9.38□□□□□ -0.91
COPB1-208ENST00000532088 BEAN1Q3B7T3 259 aa9.38□□□□□ -0.91
COPB1-208ENST00000532088 SUN5Q8TC36 379 aa9.38□□□□□ -0.91
COPB1-208ENST00000532088 LRRC20Q8TCA0 184 aa9.38□□□□□ -0.91
COPB1-208ENST00000532088 MBD3L1Q8WWY6 194 aa9.38□□□□□ -0.91
COPB1-208ENST00000532088 FAM110AQ9BQ89 295 aa9.38□□□□□ -0.91
COPB1-208ENST00000532088 PAXXQ9BUH6 204 aa9.38□□□□□ -0.91
COPB1-208ENST00000532088 MS4A6AQ9H2W1 248 aa9.38□□□□□ -0.91
COPB1-208ENST00000532088 CLEC5AQ9NY25 188 aa9.38□□□□□ -0.91
COPB1-208ENST00000532088 SMAD5-AS1Q9Y6J3 95 aa9.38□□□□□ -0.91
COPB1-208ENST00000532088 K7EQG2 157 aa9.37□□□□□ -0.91
COPB1-208ENST00000532088 SOCS3O14543 225 aa9.37□□□□□ -0.91
COPB1-208ENST00000532088 CXorf1O96002 111 aa9.37□□□□□ -0.91
COPB1-208ENST00000532088 SRSF3P84103 164 aaKnown RBP9.37□□□□□ -0.91
COPB1-208ENST00000532088 ZNF726P1Q15940 193 aa9.37□□□□□ -0.91
COPB1-208ENST00000532088 TEX261Q6UWH6 196 aa9.37□□□□□ -0.91
COPB1-208ENST00000532088 LCN15Q6UWW0 184 aa9.37□□□□□ -0.91
COPB1-208ENST00000532088 DCANP1Q8TF63 244 aa9.37□□□□□ -0.91
COPB1-208ENST00000532088 SLC50A1Q9BRV3 221 aa9.37□□□□□ -0.91
COPB1-208ENST00000532088 TMEM167BQ9NRX6 74 aa9.37□□□□□ -0.91
COPB1-208ENST00000532088 ZNF256Q9Y2P7 627 aaPredicted RBP9.37□□□□□ -0.91
COPB1-208ENST00000532088 TRAV1-1A0A0B4J248 108 aa9.36□□□□□ -0.91
COPB1-208ENST00000532088 IZUMO1RA6ND01 250 aa9.36□□□□□ -0.91
COPB1-208ENST00000532088 DNASE2O00115 360 aaPredicted RBP9.36□□□□□ -0.91
COPB1-208ENST00000532088 ISLRO14498 428 aa9.36□□□□□ -0.91
COPB1-208ENST00000532088 OR7C2O60412 319 aa9.36□□□□□ -0.91
COPB1-208ENST00000532088 IFNA7P01567 189 aa9.36□□□□□ -0.91
COPB1-208ENST00000532088 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.36□□□□□ -0.91
COPB1-208ENST00000532088 LYPD1Q8N2G4 141 aa9.36□□□□□ -0.91
COPB1-208ENST00000532088 FAM213BQ8TBF2 198 aa9.36□□□□□ -0.91
COPB1-208ENST00000532088 FXYD5Q96DB9 178 aa9.36□□□□□ -0.91
COPB1-208ENST00000532088 SAT2Q96F10 170 aaPredicted RBP9.36□□□□□ -0.91
COPB1-208ENST00000532088 ZNF503Q96F45 646 aa9.36□□□□□ -0.91
COPB1-208ENST00000532088 C17orf77Q96MU5 243 aa9.36□□□□□ -0.91
COPB1-208ENST00000532088 CLUHP3Q96NS8 147 aa9.36□□□□□ -0.91
COPB1-208ENST00000532088 VWFP04275 2813 aa9.36□□□□□ -0.91
COPB1-208ENST00000532088 TRBV19A0A075B6N1 114 aa9.35□□□□□ -0.91
COPB1-208ENST00000532088 MAP1LC3B2A6NCE7 125 aa9.35□□□□□ -0.91
COPB1-208ENST00000532088 G3V4G9 280 aa9.35□□□□□ -0.91
COPB1-208ENST00000532088 TEX46H3BTG2 121 aa9.35□□□□□ -0.91
COPB1-208ENST00000532088 HBE1P02100 147 aa9.35□□□□□ -0.91
COPB1-208ENST00000532088 NBEAP1P0C6P0 100 aa9.35□□□□□ -0.91
COPB1-208ENST00000532088 ARL14EPLP0DKL9 152 aa9.35□□□□□ -0.91
COPB1-208ENST00000532088 ID1P41134 155 aa9.35□□□□□ -0.91
COPB1-208ENST00000532088 PSMB3P49720 205 aa9.35□□□□□ -0.91
COPB1-208ENST00000532088 UBE2L3P68036 154 aaKnown RBP9.35□□□□□ -0.91
COPB1-208ENST00000532088 BLOC1S1P78537 153 aa9.35□□□□□ -0.91
COPB1-208ENST00000532088 PSG9Q00887 426 aa9.35□□□□□ -0.91
COPB1-208ENST00000532088 GUCA2BQ16661 112 aa9.35□□□□□ -0.91
COPB1-208ENST00000532088 ALKAL2Q6UX46 152 aa9.35□□□□□ -0.91
COPB1-208ENST00000532088 MAP1LC3BQ9GZQ8 125 aa9.35□□□□□ -0.91
COPB1-208ENST00000532088 ZNF586Q9NXT0 402 aa9.35□□□□□ -0.91
COPB1-208ENST00000532088 TMA7Q9Y2S6 64 aaKnown RBP9.35□□□□□ -0.91
COPB1-208ENST00000532088 H3BQ15 152 aa9.34□□□□□ -0.91
COPB1-208ENST00000532088 PYYP10082 97 aa9.34□□□□□ -0.91
COPB1-208ENST00000532088 GCHFRP30047 84 aa9.34□□□□□ -0.91
COPB1-208ENST00000532088 SNRPD3P62318 126 aaKnown RBP9.34□□□□□ -0.91
COPB1-208ENST00000532088 SSX7Q7RTT5 188 aa9.34□□□□□ -0.91
COPB1-208ENST00000532088 GTSCR1Q86UQ5 136 aa9.34□□□□□ -0.91
COPB1-208ENST00000532088 ZNF680Q8NEM1 530 aa9.34□□□□□ -0.91
COPB1-208ENST00000532088 KRTAP9-2Q9BYQ4 174 aa9.34□□□□□ -0.91
COPB1-208ENST00000532088 ZNF331Q9NQX6 463 aaPredicted RBP9.34□□□□□ -0.91
COPB1-208ENST00000532088 ARL2-SNX15V9GYD0 113 aa9.34□□□□□ -0.91
COPB1-208ENST00000532088 IGKV3-7A0A075B6H7 116 aa9.33□□□□□ -0.92
COPB1-208ENST00000532088 ZNF705EA8MWA4 302 aaPredicted RBP9.33□□□□□ -0.92
COPB1-208ENST00000532088 FHITP49789 147 aa9.33□□□□□ -0.92
COPB1-208ENST00000532088 PPT1P50897 306 aa9.33□□□□□ -0.92
COPB1-208ENST00000532088 PMS2P11Q13670 270 aa9.33□□□□□ -0.92
COPB1-208ENST00000532088 FAM74A1Q5RGS3 127 aa9.33□□□□□ -0.92
COPB1-208ENST00000532088 GBGT1Q8N5D6 347 aa9.33□□□□□ -0.92
COPB1-208ENST00000532088 ARL6IP6Q8N6S5 226 aa9.33□□□□□ -0.92
COPB1-208ENST00000532088 MRPL53Q96EL3 112 aaKnown RBP9.33□□□□□ -0.92
COPB1-208ENST00000532088 C16orf92Q96LL3 132 aa9.33□□□□□ -0.92
COPB1-208ENST00000532088 UBQLN2Q9UHD9 624 aa9.33□□□□□ -0.92
COPB1-208ENST00000532088 PRELID1Q9Y255 219 aa9.33□□□□□ -0.92
COPB1-208ENST00000532088 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.32□□□□□ -0.92
COPB1-208ENST00000532088 HMGB3O15347 200 aaKnown RBP9.32□□□□□ -0.92
COPB1-208ENST00000532088 NDUFB4O95168 129 aa9.32□□□□□ -0.92
COPB1-208ENST00000532088 OR10J4P0C629 311 aa9.32□□□□□ -0.92
COPB1-208ENST00000532088 KRTAP10-11P60412 298 aa9.32□□□□□ -0.92
COPB1-208ENST00000532088 LYPD6BQ8NI32 183 aa9.32□□□□□ -0.92
COPB1-208ENST00000532088 SFT2D1Q8WV19 159 aa9.32□□□□□ -0.92
COPB1-208ENST00000532088 NKX6-2Q9C056 277 aaPredicted RBP9.32□□□□□ -0.92
COPB1-208ENST00000532088 TRAV8-2A0A0B4J237 113 aa9.31□□□□□ -0.92
COPB1-208ENST00000532088 A0A1W2PRE2 83 aa9.31□□□□□ -0.92
COPB1-208ENST00000532088 MED14OSP0DP75 135 aa9.31□□□□□ -0.92
COPB1-208ENST00000532088 TFPI2P48307 235 aa9.31□□□□□ -0.92
COPB1-208ENST00000532088 ODF3L2Q3SX64 289 aa9.31□□□□□ -0.92
COPB1-208ENST00000532088 ZNF767PQ75MW2 155 aa9.31□□□□□ -0.92
COPB1-208ENST00000532088 AAMDCQ9H7C9 122 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms