RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 H3BQ15 152 aa13.68□□□□□ -0.22
PUF60-218ENST00000531995 SNRPCP09234 159 aaKnown RBP13.68□□□□□ -0.22
PUF60-218ENST00000531995 LGALSLQ3ZCW2 172 aaPredicted RBP13.68□□□□□ -0.22
PUF60-218ENST00000531995 IL17DQ8TAD2 202 aa13.68□□□□□ -0.22
PUF60-218ENST00000531995 PSMG3Q9BT73 122 aaPredicted RBP13.68□□□□□ -0.22
PUF60-218ENST00000531995 A0A0D9SG52 128 aa13.67□□□□□ -0.22
PUF60-218ENST00000531995 DEFB1P60022 68 aa13.67□□□□□ -0.22
PUF60-218ENST00000531995 PSMG4Q5JS54 123 aa13.67□□□□□ -0.22
PUF60-218ENST00000531995 IGFL4Q6B9Z1 124 aa13.67□□□□□ -0.22
PUF60-218ENST00000531995 BPIFA4PQ86YQ2 179 aa13.67□□□□□ -0.22
PUF60-218ENST00000531995 SAT2Q96F10 170 aaPredicted RBP13.67□□□□□ -0.22
PUF60-218ENST00000531995 ARPC5LQ9BPX5 153 aa13.67□□□□□ -0.22
PUF60-218ENST00000531995 TMEM14CQ9P0S9 112 aa13.67□□□□□ -0.22
PUF60-218ENST00000531995 RNF24Q9Y225 148 aa13.67□□□□□ -0.22
PUF60-218ENST00000531995 FUT9Q9Y231 359 aa13.67□□□□□ -0.22
PUF60-218ENST00000531995 FRAS1Q86XX4 4008 aa13.67□□□□□ -0.22
PUF60-218ENST00000531995 BORCS7-ASMTA0A0B4J1R7 106 aa13.66□□□□□ -0.22
PUF60-218ENST00000531995 KNCNA6PVL3 124 aa13.66□□□□□ -0.22
PUF60-218ENST00000531995 ISLRO14498 428 aa13.66□□□□□ -0.22
PUF60-218ENST00000531995 EIF3GO75821 320 aaKnown RBP eCLIP13.66□□□□□ -0.22
PUF60-218ENST00000531995 ATF4P18848 351 aaPredicted RBP13.66□□□□□ -0.22
PUF60-218ENST00000531995 HLA-DMBP28068 263 aa13.66□□□□□ -0.22
PUF60-218ENST00000531995 PSMB3P49720 205 aa13.66□□□□□ -0.22
PUF60-218ENST00000531995 MEOX2P50222 304 aa13.66□□□□□ -0.22
PUF60-218ENST00000531995 RAB2AP61019 212 aa13.66□□□□□ -0.22
PUF60-218ENST00000531995 TMUB2Q71RG4 321 aa13.66□□□□□ -0.22
PUF60-218ENST00000531995 ZNF503Q96F45 646 aa13.66□□□□□ -0.22
PUF60-218ENST00000531995 ZNF586Q9NXT0 402 aa13.66□□□□□ -0.22
PUF60-218ENST00000531995 H3BTX0 84 aa13.65□□□□□ -0.22
PUF60-218ENST00000531995 PYYP10082 97 aa13.65□□□□□ -0.22
PUF60-218ENST00000531995 M6PRP20645 277 aa13.65□□□□□ -0.22
PUF60-218ENST00000531995 ACOT6Q3I5F7 207 aaPredicted RBP13.65□□□□□ -0.22
PUF60-218ENST00000531995 RPP25LQ8N5L8 163 aaKnown RBP13.65□□□□□ -0.22
PUF60-218ENST00000531995 C16orf92Q96LL3 132 aa13.65□□□□□ -0.22
PUF60-218ENST00000531995 LINC00052Q96N35 136 aa13.65□□□□□ -0.22
PUF60-218ENST00000531995 MRPL32Q9BYC8 188 aaKnown RBP13.65□□□□□ -0.22
PUF60-218ENST00000531995 HRH4Q9H3N8 390 aa13.65□□□□□ -0.22
PUF60-218ENST00000531995 PLA2G2EQ9NZK7 142 aa13.65□□□□□ -0.22
PUF60-218ENST00000531995 AGRNO00468 2067 aa13.65□□□□□ -0.22
PUF60-218ENST00000531995 LOC102724200A0A096LPH7 203 aaPredicted RBP13.64□□□□□ -0.23
PUF60-218ENST00000531995 SLC17A3O00476 420 aa13.64□□□□□ -0.23
PUF60-218ENST00000531995 BCL2L11O43521 198 aa13.64□□□□□ -0.23
PUF60-218ENST00000531995 ID1P41134 155 aa13.64□□□□□ -0.23
PUF60-218ENST00000531995 SNRPD3P62318 126 aaKnown RBP13.64□□□□□ -0.23
PUF60-218ENST00000531995 SERF2P84101 59 aa13.64□□□□□ -0.23
PUF60-218ENST00000531995 PMS2P11Q13670 270 aa13.64□□□□□ -0.23
PUF60-218ENST00000531995 GDF5OSQ5U4N7 250 aa13.64□□□□□ -0.23
PUF60-218ENST00000531995 OR10G4Q8NGN3 311 aa13.64□□□□□ -0.23
PUF60-218ENST00000531995 OR10G9Q8NGN4 311 aa13.64□□□□□ -0.23
PUF60-218ENST00000531995 OR10G7Q8NGN6 311 aa13.64□□□□□ -0.23
PUF60-218ENST00000531995 GNPNAT1Q96EK6 184 aaPredicted RBP13.64□□□□□ -0.23
PUF60-218ENST00000531995 NDUFB4O95168 129 aa13.63□□□□□ -0.23
PUF60-218ENST00000531995 RPL35AP18077 110 aaKnown RBP13.63□□□□□ -0.23
PUF60-218ENST00000531995 RHOBP62745 196 aa13.63□□□□□ -0.23
PUF60-218ENST00000531995 SAMD13Q5VXD3 122 aa13.63□□□□□ -0.23
PUF60-218ENST00000531995 RNF182Q8N6D2 247 aa13.63□□□□□ -0.23
PUF60-218ENST00000531995 FXYD5Q96DB9 178 aa13.63□□□□□ -0.23
PUF60-218ENST00000531995 HYLS1Q96M11 299 aa13.63□□□□□ -0.23
PUF60-218ENST00000531995 ZNF331Q9NQX6 463 aaPredicted RBP13.63□□□□□ -0.23
PUF60-218ENST00000531995 RPRMQ9NS64 109 aa13.63□□□□□ -0.23
PUF60-218ENST00000531995 TRBV19A0A075B6N1 114 aa13.62□□□□□ -0.23
PUF60-218ENST00000531995 HIST1H1EP10412 219 aaKnown RBP13.62□□□□□ -0.23
PUF60-218ENST00000531995 SPP1P10451 314 aa13.62□□□□□ -0.23
PUF60-218ENST00000531995 FAM122CQ6P4D5 195 aa13.62□□□□□ -0.23
PUF60-218ENST00000531995 TRPT1Q86TN4 253 aaKnown RBP13.62□□□□□ -0.23
PUF60-218ENST00000531995 OVOL2Q9BRP0 275 aa13.62□□□□□ -0.23
PUF60-218ENST00000531995 OR51M1Q9H341 326 aa13.62□□□□□ -0.23
PUF60-218ENST00000531995 F6UB75 175 aa13.61□□□□□ -0.23
PUF60-218ENST00000531995 H3BMM0 161 aa13.61□□□□□ -0.23
PUF60-218ENST00000531995 GUK1Q16774 197 aa13.61□□□□□ -0.23
PUF60-218ENST00000531995 ACTL10Q5JWF8 245 aa13.61□□□□□ -0.23
PUF60-218ENST00000531995 LCN15Q6UWW0 184 aa13.61□□□□□ -0.23
PUF60-218ENST00000531995 SAV1Q9H4B6 383 aaPredicted RBP13.61□□□□□ -0.23
PUF60-218ENST00000531995 KANTRA0A1W2PQU2 76 aa13.6□□□□□ -0.23
PUF60-218ENST00000531995 CXorf65A6NEN9 183 aa13.6□□□□□ -0.23
PUF60-218ENST00000531995 GIG44P09565 113 aaPredicted RBP13.6□□□□□ -0.23
PUF60-218ENST00000531995 ZNF726P1Q15940 193 aa13.6□□□□□ -0.23
PUF60-218ENST00000531995 PSG3Q16557 428 aa13.6□□□□□ -0.23
PUF60-218ENST00000531995 SSX7Q7RTT5 188 aa13.6□□□□□ -0.23
PUF60-218ENST00000531995 C9orf62Q8N4C0 152 aa13.6□□□□□ -0.23
PUF60-218ENST00000531995 RNF141Q8WVD5 230 aa13.6□□□□□ -0.23
PUF60-218ENST00000531995 LINC00476Q8WZB0 136 aa13.6□□□□□ -0.23
PUF60-218ENST00000531995 PAXXQ9BUH6 204 aa13.6□□□□□ -0.23
PUF60-218ENST00000531995 KMT2AQ03164 3969 aa13.6□□□□□ -0.23
PUF60-218ENST00000531995 HMGB3O15347 200 aaKnown RBP13.59□□□□□ -0.23
PUF60-218ENST00000531995 ZNF253O75346 499 aa13.59□□□□□ -0.23
PUF60-218ENST00000531995 MBP02144 154 aa13.59□□□□□ -0.23
PUF60-218ENST00000531995 OR10J4P0C629 311 aa13.59□□□□□ -0.23
PUF60-218ENST00000531995 NBEAP1P0C6P0 100 aa13.59□□□□□ -0.23
PUF60-218ENST00000531995 PRB4P10163 310 aaPredicted RBP13.59□□□□□ -0.23
PUF60-218ENST00000531995 HLA-DRB4P13762 266 aa13.59□□□□□ -0.23
PUF60-218ENST00000531995 TMEM41BQ5BJD5 291 aa13.59□□□□□ -0.23
PUF60-218ENST00000531995 FOXI2Q6ZQN5 318 aa13.59□□□□□ -0.23
PUF60-218ENST00000531995 STHQ8IWL8 128 aa13.59□□□□□ -0.23
PUF60-218ENST00000531995 SLC50A1Q9BRV3 221 aa13.59□□□□□ -0.23
PUF60-218ENST00000531995 ZNF471Q9BX82 626 aaPredicted RBP13.59□□□□□ -0.23
PUF60-218ENST00000531995 HLA-DRB4X5D2U9 266 aa13.59□□□□□ -0.23
PUF60-218ENST00000531995 KIR2DL5BA0A0G2JN68 375 aa13.58□□□□□ -0.24
PUF60-218ENST00000531995 KIR2DL5BA0A0G2JPC4 375 aa13.58□□□□□ -0.24
PUF60-218ENST00000531995 A0A0J9YWU9 116 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms