RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 FAM3BP58499 235 aaPredicted RBP6.21□□□□□ -1.42
USF1-210ENST00000531842 KRTAP10-1P60331 282 aa6.21□□□□□ -1.42
USF1-210ENST00000531842 AKR1C1Q04828 323 aa6.21□□□□□ -1.42
USF1-210ENST00000531842 SPINK13Q1W4C9 94 aa6.21□□□□□ -1.42
USF1-210ENST00000531842 SPANXN5Q5MJ07 72 aa6.21□□□□□ -1.42
USF1-210ENST00000531842 AMTNQ6UX39 209 aa6.21□□□□□ -1.42
USF1-210ENST00000531842 LINC00299Q6ZSB3 139 aa6.21□□□□□ -1.42
USF1-210ENST00000531842 BPIFCQ8NFQ6 507 aa6.21□□□□□ -1.42
USF1-210ENST00000531842 OR1B1Q8NGR6 318 aa6.21□□□□□ -1.42
USF1-210ENST00000531842 C18orf15Q96N68 181 aa6.21□□□□□ -1.42
USF1-210ENST00000531842 CIB3Q96Q77 187 aaPredicted RBP6.21□□□□□ -1.42
USF1-210ENST00000531842 SEC22CQ9BRL7 303 aa6.21□□□□□ -1.42
USF1-210ENST00000531842 SLC25A32Q9H2D1 315 aa6.21□□□□□ -1.42
USF1-210ENST00000531842 C11orf1Q9H5F2 150 aa6.21□□□□□ -1.42
USF1-210ENST00000531842 PPP1R14DQ9NXH3 145 aa6.21□□□□□ -1.42
USF1-210ENST00000531842 RCL1Q9Y2P8 373 aaKnown RBP6.21□□□□□ -1.42
USF1-210ENST00000531842 TRAV12-2A0A075B6T6 113 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 TRAV6A0A075B6T7 132 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 A0A0J9YY99 117 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 SMCO3A2RU48 225 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 CCSO14618 274 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 CRXO43186 299 aaPredicted RBP6.2□□□□□ -1.42
USF1-210ENST00000531842 DUSP14O95147 198 aaKnown RBP6.2□□□□□ -1.42
USF1-210ENST00000531842 INSP01308 110 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 DNAH10OSP0CZ25 163 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 GATA2P23769 480 aaPredicted RBP6.2□□□□□ -1.42
USF1-210ENST00000531842 INPP1P49441 399 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 CNN1P51911 297 aaKnown RBP6.2□□□□□ -1.42
USF1-210ENST00000531842 CCL18P55774 89 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 ARL16Q0P5N6 197 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 IL15RAQ13261 267 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 CLINT1Q14677 625 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 C4orf46Q504U0 113 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 THAP8Q8NA92 274 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 ZNF738Q8NE65 137 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 LRRC20Q8TCA0 184 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 IGF2BP2-AS1Q96M15 143 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 CCDC32Q9BV29 185 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 NUDT15Q9NV35 164 aa6.2□□□□□ -1.42
USF1-210ENST00000531842 MBPP02686 304 aaPredicted RBP6.19□□□□□ -1.42
USF1-210ENST00000531842 IL5P05113 134 aa6.19□□□□□ -1.42
USF1-210ENST00000531842 HTN1P15515 57 aa6.19□□□□□ -1.42
USF1-210ENST00000531842 LINC00315P59091 139 aa6.19□□□□□ -1.42
USF1-210ENST00000531842 RAP2BP61225 183 aa6.19□□□□□ -1.42
USF1-210ENST00000531842 RHOBP62745 196 aa6.19□□□□□ -1.42
USF1-210ENST00000531842 ASAH1Q13510 395 aa6.19□□□□□ -1.42
USF1-210ENST00000531842 ESRGQ1W209 222 aa6.19□□□□□ -1.42
USF1-210ENST00000531842 TMEM14EPQ6UXP3 125 aa6.19□□□□□ -1.42
USF1-210ENST00000531842 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.19□□□□□ -1.42
USF1-210ENST00000531842 Q6ZRN7 208 aaPredicted RBP6.19□□□□□ -1.42
USF1-210ENST00000531842 RNF182Q8N6D2 247 aa6.19□□□□□ -1.42
USF1-210ENST00000531842 ZBTB8BQ8NAP8 495 aaPredicted RBP6.19□□□□□ -1.42
USF1-210ENST00000531842 GPR82Q96P67 336 aa6.19□□□□□ -1.42
USF1-210ENST00000531842 LINC01587Q99440 93 aa6.19□□□□□ -1.42
USF1-210ENST00000531842 SLC25A39Q9BZJ4 359 aaPredicted RBP6.19□□□□□ -1.42
USF1-210ENST00000531842 SLC45A2Q9UMX9 530 aa6.19□□□□□ -1.42
USF1-210ENST00000531842 STRAPQ9Y3F4 350 aaKnown RBP6.19□□□□□ -1.42
USF1-210ENST00000531842 C7orf66A4D0T2 115 aa6.18□□□□□ -1.42
USF1-210ENST00000531842 LYRM9A8MSI8 78 aa6.18□□□□□ -1.42
USF1-210ENST00000531842 CENPXA8MT69 81 aa6.18□□□□□ -1.42
USF1-210ENST00000531842 SSSCA1O60232 199 aa6.18□□□□□ -1.42
USF1-210ENST00000531842 HYPMO75409 117 aa6.18□□□□□ -1.42
USF1-210ENST00000531842 OR5G3P0C626 314 aa6.18□□□□□ -1.42
USF1-210ENST00000531842 B2MP61769 119 aa6.18□□□□□ -1.42
USF1-210ENST00000531842 OR5I1Q13606 314 aa6.18□□□□□ -1.42
USF1-210ENST00000531842 IAH1Q2TAA2 248 aaPredicted RBP6.18□□□□□ -1.42
USF1-210ENST00000531842 ACOT7LQ6ZUV0 252 aa6.18□□□□□ -1.42
USF1-210ENST00000531842 OR11H7Q8NGC8 314 aa6.18□□□□□ -1.42
USF1-210ENST00000531842 ZNF431Q8TF32 576 aaPredicted RBP6.18□□□□□ -1.42
USF1-210ENST00000531842 SMIM8Q96KF7 97 aa6.18□□□□□ -1.42
USF1-210ENST00000531842 Q9H3A6 140 aa6.18□□□□□ -1.42
USF1-210ENST00000531842 PSENENQ9NZ42 101 aa6.18□□□□□ -1.42
USF1-210ENST00000531842 PTTG2Q9NZH5 202 aa6.18□□□□□ -1.42
USF1-210ENST00000531842 HIGD1AQ9Y241 93 aa6.18□□□□□ -1.42
USF1-210ENST00000531842 TRAV26-1A0A087WT03 109 aa6.17□□□□□ -1.42
USF1-210ENST00000531842 TRAV8-2A0A0B4J237 113 aa6.17□□□□□ -1.42
USF1-210ENST00000531842 UPK1BO75841 260 aa6.17□□□□□ -1.42
USF1-210ENST00000531842 ATP5G1P05496 136 aa6.17□□□□□ -1.42
USF1-210ENST00000531842 H2AFB2P0C5Z0 115 aa6.17□□□□□ -1.42
USF1-210ENST00000531842 RPL7P18124 248 aaKnown RBP6.17□□□□□ -1.42
USF1-210ENST00000531842 HOXA5P20719 270 aa6.17□□□□□ -1.42
USF1-210ENST00000531842 ATP5G3P48201 142 aa6.17□□□□□ -1.42
USF1-210ENST00000531842 HIST1H1AQ02539 215 aaPredicted RBP6.17□□□□□ -1.42
USF1-210ENST00000531842 CYP2G1PQ6ZSU1 146 aa6.17□□□□□ -1.42
USF1-210ENST00000531842 NRARPQ7Z6K4 114 aa6.17□□□□□ -1.42
USF1-210ENST00000531842 S100A7AQ86SG5 101 aa6.17□□□□□ -1.42
USF1-210ENST00000531842 S100ZQ8WXG8 99 aa6.17□□□□□ -1.42
USF1-210ENST00000531842 FRZBQ92765 325 aa6.17□□□□□ -1.42
USF1-210ENST00000531842 BOLA2-SMG1P6H3BVE0 249 aa6.16□□□□□ -1.42
USF1-210ENST00000531842 METTL15P1P0C7V9 234 aa6.16□□□□□ -1.42
USF1-210ENST00000531842 BTF3P20290 206 aaKnown RBP6.16□□□□□ -1.42
USF1-210ENST00000531842 KIR3DS1Q14943 382 aa6.16□□□□□ -1.42
USF1-210ENST00000531842 PATE2Q6UY27 113 aa6.16□□□□□ -1.42
USF1-210ENST00000531842 TMEM144Q7Z5S9 345 aa6.16□□□□□ -1.42
USF1-210ENST00000531842 C12orf45Q8N5I9 185 aaPredicted RBP6.16□□□□□ -1.42
USF1-210ENST00000531842 SHANK2-AS3Q9BTD1 123 aa6.16□□□□□ -1.42
USF1-210ENST00000531842 PARD6GQ9BYG4 376 aaPredicted RBP6.16□□□□□ -1.42
USF1-210ENST00000531842 NOP10Q9NPE3 64 aaKnown RBP6.16□□□□□ -1.42
USF1-210ENST00000531842 GSKIPQ9P0R6 139 aa6.16□□□□□ -1.42
USF1-210ENST00000531842 HMCN2Q8NDA2 5059 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms