RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 MORN5Q5VZ52 161 aa10.74□□□□□ -0.69
CPSF1-206ENST00000531480 LEMD1Q68G75 181 aa10.74□□□□□ -0.69
CPSF1-206ENST00000531480 FAM24BQ8N5W8 94 aa10.74□□□□□ -0.69
CPSF1-206ENST00000531480 DEFB125Q8N687 156 aa10.74□□□□□ -0.69
CPSF1-206ENST00000531480 CITED4Q96RK1 184 aa10.74□□□□□ -0.69
CPSF1-206ENST00000531480 WFDC10AQ9H1F0 79 aa10.74□□□□□ -0.69
CPSF1-206ENST00000531480 SMDT1Q9H4I9 107 aa10.74□□□□□ -0.69
CPSF1-206ENST00000531480 MAP6D1Q9H9H5 199 aa10.74□□□□□ -0.69
CPSF1-206ENST00000531480 A0A087X0K7 114 aa10.73□□□□□ -0.69
CPSF1-206ENST00000531480 TRAV1-1A0A0B4J248 108 aa10.73□□□□□ -0.69
CPSF1-206ENST00000531480 LINC00862A6NCI5 91 aa10.73□□□□□ -0.69
CPSF1-206ENST00000531480 NMBP08949 121 aa10.73□□□□□ -0.69
CPSF1-206ENST00000531480 FRMD6-AS1P0C7T7 363 aa10.73□□□□□ -0.69
CPSF1-206ENST00000531480 GALR1P47211 349 aa10.73□□□□□ -0.69
CPSF1-206ENST00000531480 SAMD13Q5VXD3 122 aa10.73□□□□□ -0.69
CPSF1-206ENST00000531480 SFT2D1Q8WV19 159 aa10.73□□□□□ -0.69
CPSF1-206ENST00000531480 SLC25A22Q9H936 323 aa10.73□□□□□ -0.69
CPSF1-206ENST00000531480 RPRMQ9NS64 109 aa10.73□□□□□ -0.69
CPSF1-206ENST00000531480 DNAH9Q9NYC9 4486 aa10.73□□□□□ -0.69
CPSF1-206ENST00000531480 RAB19A4D1S5 217 aa10.72□□□□□ -0.69
CPSF1-206ENST00000531480 TFPI2P48307 235 aa10.72□□□□□ -0.69
CPSF1-206ENST00000531480 CDC34P49427 236 aaPredicted RBP10.72□□□□□ -0.69
CPSF1-206ENST00000531480 MEOX2P50222 304 aa10.72□□□□□ -0.69
CPSF1-206ENST00000531480 GCSAMLQ5JQS6 135 aa10.72□□□□□ -0.69
CPSF1-206ENST00000531480 FAM74A1Q5RGS3 127 aa10.72□□□□□ -0.69
CPSF1-206ENST00000531480 UQCC3Q6UW78 93 aa10.72□□□□□ -0.69
CPSF1-206ENST00000531480 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.72□□□□□ -0.69
CPSF1-206ENST00000531480 SUN5Q8TC36 379 aa10.72□□□□□ -0.69
CPSF1-206ENST00000531480 MBD3L1Q8WWY6 194 aa10.72□□□□□ -0.69
CPSF1-206ENST00000531480 RBMY1BA6NDE4 496 aaKnown RBP10.71□□□□□ -0.69
CPSF1-206ENST00000531480 RBMY1EA6NEQ0 496 aaKnown RBP10.71□□□□□ -0.69
CPSF1-206ENST00000531480 ISLRO14498 428 aa10.71□□□□□ -0.69
CPSF1-206ENST00000531480 CXorf1O96002 111 aa10.71□□□□□ -0.69
CPSF1-206ENST00000531480 RBMY1DP0C7P1 496 aaKnown RBP10.71□□□□□ -0.69
CPSF1-206ENST00000531480 PSMB3P49720 205 aa10.71□□□□□ -0.69
CPSF1-206ENST00000531480 PEA15Q15121 130 aa10.71□□□□□ -0.69
CPSF1-206ENST00000531480 KHDC3LQ587J8 217 aa10.71□□□□□ -0.69
CPSF1-206ENST00000531480 PQLC2Q6ZP29 291 aa10.71□□□□□ -0.69
CPSF1-206ENST00000531480 BPIFA4PQ86YQ2 179 aa10.71□□□□□ -0.69
CPSF1-206ENST00000531480 WFDC3Q8IUB2 231 aa10.71□□□□□ -0.69
CPSF1-206ENST00000531480 HRH4Q9H3N8 390 aa10.71□□□□□ -0.69
CPSF1-206ENST00000531480 SRD5A3Q9H8P0 318 aa10.71□□□□□ -0.69
CPSF1-206ENST00000531480 IGLC2P0DOY2 106 aa10.7□□□□□ -0.7
CPSF1-206ENST00000531480 PMS2P11Q13670 270 aa10.7□□□□□ -0.7
CPSF1-206ENST00000531480 FAM78BQ5VT40 261 aa10.7□□□□□ -0.7
CPSF1-206ENST00000531480 FAM122CQ6P4D5 195 aa10.7□□□□□ -0.7
CPSF1-206ENST00000531480 FAM167A-AS1Q96KT0 104 aa10.7□□□□□ -0.7
CPSF1-206ENST00000531480 TXNDC17Q9BRA2 123 aa10.7□□□□□ -0.7
CPSF1-206ENST00000531480 TMEM167BQ9NRX6 74 aa10.7□□□□□ -0.7
CPSF1-206ENST00000531480 TMEM14CQ9P0S9 112 aa10.7□□□□□ -0.7
CPSF1-206ENST00000531480 FUT9Q9Y231 359 aa10.7□□□□□ -0.7
CPSF1-206ENST00000531480 RFNGQ9Y644 331 aa10.7□□□□□ -0.7
CPSF1-206ENST00000531480 MAP1LC3B2A6NCE7 125 aa10.69□□□□□ -0.7
CPSF1-206ENST00000531480 ZNF688P0C7X2 276 aa10.69□□□□□ -0.7
CPSF1-206ENST00000531480 DEFB131AP59861 70 aa10.69□□□□□ -0.7
CPSF1-206ENST00000531480 SNRPD3P62318 126 aaKnown RBP10.69□□□□□ -0.7
CPSF1-206ENST00000531480 APRG1Q8IVJ8 170 aa10.69□□□□□ -0.7
CPSF1-206ENST00000531480 LYPD6BQ8NI32 183 aa10.69□□□□□ -0.7
CPSF1-206ENST00000531480 RAB24Q969Q5 203 aa10.69□□□□□ -0.7
CPSF1-206ENST00000531480 NKX6-2Q9C056 277 aaPredicted RBP10.69□□□□□ -0.7
CPSF1-206ENST00000531480 MAP1LC3BQ9GZQ8 125 aa10.69□□□□□ -0.7
CPSF1-206ENST00000531480 TUBA4BQ9H853 241 aa10.69□□□□□ -0.7
CPSF1-206ENST00000531480 MANBALQ9NQG1 85 aa10.69□□□□□ -0.7
CPSF1-206ENST00000531480 AGRNO00468 2067 aa10.69□□□□□ -0.7
CPSF1-206ENST00000531480 TRAV8-2A0A0B4J237 113 aa10.68□□□□□ -0.7
CPSF1-206ENST00000531480 TRAV5A0A0B4J249 113 aa10.68□□□□□ -0.7
CPSF1-206ENST00000531480 ZNF124Q15973 351 aa10.68□□□□□ -0.7
CPSF1-206ENST00000531480 SBSPONQ8IVN8 264 aa10.68□□□□□ -0.7
CPSF1-206ENST00000531480 RPP25LQ8N5L8 163 aaKnown RBP10.68□□□□□ -0.7
CPSF1-206ENST00000531480 SLC25A2Q9BXI2 301 aa10.68□□□□□ -0.7
CPSF1-206ENST00000531480 NBEAL2Q6ZNJ1 2754 aa10.67□□□□□ -0.7
CPSF1-206ENST00000531480 TENM3Q9P273 2699 aa10.67□□□□□ -0.7
CPSF1-206ENST00000531480 ZNF253O75346 499 aa10.67□□□□□ -0.7
CPSF1-206ENST00000531480 NDUFS6O75380 124 aaKnown RBP10.67□□□□□ -0.7
CPSF1-206ENST00000531480 NHLRC4P0CG21 123 aaPredicted RBP10.67□□□□□ -0.7
CPSF1-206ENST00000531480 ATF4P18848 351 aaPredicted RBP10.67□□□□□ -0.7
CPSF1-206ENST00000531480 ID1P41134 155 aa10.67□□□□□ -0.7
CPSF1-206ENST00000531480 GUK1Q16774 197 aa10.67□□□□□ -0.7
CPSF1-206ENST00000531480 HAGHQ16775 308 aa10.67□□□□□ -0.7
CPSF1-206ENST00000531480 PSMG4Q5JS54 123 aa10.67□□□□□ -0.7
CPSF1-206ENST00000531480 SPATA31B1PQ5VZV4 182 aa10.67□□□□□ -0.7
CPSF1-206ENST00000531480 LCN15Q6UWW0 184 aa10.67□□□□□ -0.7
CPSF1-206ENST00000531480 COMMD7Q86VX2 200 aa10.67□□□□□ -0.7
CPSF1-206ENST00000531480 EIF4E3Q8N5X7 224 aaKnown RBP10.67□□□□□ -0.7
CPSF1-206ENST00000531480 TM2D3Q9BRN9 247 aa10.67□□□□□ -0.7
CPSF1-206ENST00000531480 EIF5A2Q9GZV4 153 aaKnown RBP10.67□□□□□ -0.7
CPSF1-206ENST00000531480 ARL2-SNX15V9GYD0 113 aa10.67□□□□□ -0.7
CPSF1-206ENST00000531480 LOC102724200A0A096LPH7 203 aaPredicted RBP10.66□□□□□ -0.7
CPSF1-206ENST00000531480 KIR2DL5BA0A0G2JN68 375 aa10.66□□□□□ -0.7
CPSF1-206ENST00000531480 KIR2DL5BA0A0G2JPC4 375 aa10.66□□□□□ -0.7
CPSF1-206ENST00000531480 H3BQ15 152 aa10.66□□□□□ -0.7
CPSF1-206ENST00000531480 STAG3L2P0CL84 134 aa10.66□□□□□ -0.7
CPSF1-206ENST00000531480 STAG3L3P0CL85 134 aa10.66□□□□□ -0.7
CPSF1-206ENST00000531480 S100A1P23297 94 aa10.66□□□□□ -0.7
CPSF1-206ENST00000531480 MIR17HGQ75NE6 70 aa10.66□□□□□ -0.7
CPSF1-206ENST00000531480 TRPT1Q86TN4 253 aaKnown RBP10.66□□□□□ -0.7
CPSF1-206ENST00000531480 IQCF2Q8IXL9 164 aa10.66□□□□□ -0.7
CPSF1-206ENST00000531480 KIR2DL5AQ8N109 375 aa10.66□□□□□ -0.7
CPSF1-206ENST00000531480 KIR2DL5BQ8NHK3 375 aa10.66□□□□□ -0.7
CPSF1-206ENST00000531480 C20orf173Q96LM9 149 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms