RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 TMEM243Q9BU79 118 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 SLC25A2Q9BXI2 301 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 AIG1Q9NVV5 245 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 ZNF222Q9UK12 451 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 ITGB4P16144 1822 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 ADGRB3O60242 1522 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 ARAP2Q8WZ64 1704 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 ABCA3Q99758 1704 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 ATRNO75882 1429 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 MYH2Q9UKX2 1941 aa2.25□□□□□ -2.05
PTPRK-220ENST00000531466 PIK3C2BO00750 1634 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 ABCA6Q8N139 1617 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 LTN1O94822 1766 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 UBR2Q8IWV8 1755 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 ABCC1P33527 1531 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 TRBV24-1A0A075B6N3 115 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 C17orf112F2Z3M2 114 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 C19orf84I3L1E1 186 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 TMEM256-PLSCR3K7ERE1 68 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 FSTL3O95633 263 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 HLA-DQA1P01909 254 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 TRGC1P0CF51 173 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 COX7CP15954 63 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 CRISP3P54108 245 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 SNRPD3P62318 126 aaKnown RBP2.24□□□□□ -2.05
PTPRK-220ENST00000531466 RPL23P62829 140 aaKnown RBP2.24□□□□□ -2.05
PTPRK-220ENST00000531466 EGFEM1PQ0D2K5 195 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 ZNF345Q14585 488 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 KIAA0087Q14695 138 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 SPATA45Q537H7 98 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 BVES-AS1Q5T3Y7 98 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 C12orf73Q69YU5 71 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 EBLN2Q6P2I7 272 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 RFLNAQ6ZTI6 216 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 SMIM5Q71RC9 77 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 PHF5AQ7RTV0 110 aaKnown RBP2.24□□□□□ -2.05
PTPRK-220ENST00000531466 LINC00337Q8N6G1 96 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 MORN4Q8NDC4 146 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 MYOZ3Q8TDC0 251 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 PPDPFLQ8WWR9 84 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 H1FXQ92522 213 aaKnown RBP2.24□□□□□ -2.05
PTPRK-220ENST00000531466 PLA2G2FQ9BZM2 168 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 SLC35B3Q9H1N7 401 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 BCL2L10Q9HD36 194 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 TMEM242Q9NWH2 141 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 RNF11Q9Y3C5 154 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 SPHKAPQ2M3C7 1700 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 MARF1Q9Y4F3 1742 aaKnown RBP2.24□□□□□ -2.05
PTPRK-220ENST00000531466 PIK3C2AO00443 1686 aa2.24□□□□□ -2.05
PTPRK-220ENST00000531466 DIP2BQ9P265 1576 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 HMGXB3Q12766 1538 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 MYO5CQ9NQX4 1742 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 MYH13Q9UKX3 1938 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 CFAP43Q8NDM7 1665 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 PIGBOS1A0A0B4J2F0 54 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 TRBV7-7A0A0K0K1E9 115 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 LOC107986453A0A1B0GWG9 222 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 A0A1W2PPM0 123 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 KANTRA0A1W2PQU2 76 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 ZNF860A6NHJ4 632 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 OOSP1A8MZH6 123 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 M0R378 163 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 ATOX1O00244 68 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 GNGT2O14610 69 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 IGHV3-48P01763 117 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 CD7P09564 240 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 SFTA3P0C7M3 94 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 ZNF286BP0CG31 522 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 HLA-DMBP28068 263 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 BTCP35070 178 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 POLR2IP36954 125 aaKnown RBP2.23□□□□□ -2.05
PTPRK-220ENST00000531466 CSN1S1P47710 185 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 DYNLT3P51808 116 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 CCL20P78556 96 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 SP6Q3SY56 376 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 ORMDL2Q53FV1 153 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 ZNF660Q6AZW8 331 aaPredicted RBP2.23□□□□□ -2.05
PTPRK-220ENST00000531466 LGALS9CQ6DKI2 356 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 ZNF322Q6U7Q0 402 aaPredicted RBP2.23□□□□□ -2.05
PTPRK-220ENST00000531466 ZNF101Q8IZC7 436 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 WFDC11Q8NEX6 87 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 OR2T35Q8NGX2 323 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 TMEM158Q8WZ71 300 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 MUCL1Q96DR8 90 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 RMI2Q96E14 147 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 MGST2Q99735 147 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 POLR2J2Q9GZM3 115 aaKnown RBP2.23□□□□□ -2.05
PTPRK-220ENST00000531466 ZNF286AQ9HBT8 521 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 TAC3Q9UHF0 121 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 LAMB4A4D0S4 1761 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 ADAMTSL1Q8N6G6 1762 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 IQGAP2Q13576 1575 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 RLFQ13129 1914 aa2.23□□□□□ -2.05
PTPRK-220ENST00000531466 KNDC1Q76NI1 1749 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 PEAK1Q9H792 1746 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 EHBP1L1Q8N3D4 1523 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 DLC1Q96QB1 1528 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 PHF3Q92576 2039 aaKnown RBP2.22□□□□□ -2.05
PTPRK-220ENST00000531466 MAP3K4Q9Y6R4 1608 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 245.6 ms