RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 LINC00473A8K010 186 aa11.88□□□□□ -0.51
LRRK1-207ENST00000531270 IL18BPO95998 194 aa11.88□□□□□ -0.51
LRRK1-207ENST00000531270 CRYGSP22914 178 aa11.88□□□□□ -0.51
LRRK1-207ENST00000531270 GGNQ86UU5 652 aa11.88□□□□□ -0.51
LRRK1-207ENST00000531270 ZNRD1Q9P1U0 126 aa11.88□□□□□ -0.51
LRRK1-207ENST00000531270 TMEM213A2RRL7 107 aa11.87□□□□□ -0.51
LRRK1-207ENST00000531270 E9PQ18 207 aa11.87□□□□□ -0.51
LRRK1-207ENST00000531270 RNF5Q99942 180 aa11.87□□□□□ -0.51
LRRK1-207ENST00000531270 IGF2BP2-AS1Q96M15 143 aa11.87□□□□□ -0.51
LRRK1-207ENST00000531270 UBE2CO00762 179 aa11.87□□□□□ -0.51
LRRK1-207ENST00000531270 LINC00479Q96M42 142 aa11.87□□□□□ -0.51
LRRK1-207ENST00000531270 IGKV1OR2-108A0A075B7D4 117 aa11.87□□□□□ -0.51
LRRK1-207ENST00000531270 ATP6V0E1O15342 81 aa11.87□□□□□ -0.51
LRRK1-207ENST00000531270 TINCRA0A1B0GVN0 87 aa11.86□□□□□ -0.51
LRRK1-207ENST00000531270 C5orf47Q569G3 176 aa11.86□□□□□ -0.51
LRRK1-207ENST00000531270 DSCR8Q96T75 97 aa11.86□□□□□ -0.51
LRRK1-207ENST00000531270 LTBP4Q8N2S1 1624 aa11.86□□□□□ -0.51
LRRK1-207ENST00000531270 TRAV26-2A0A0B4J265 109 aa11.86□□□□□ -0.51
LRRK1-207ENST00000531270 NEGR1Q7Z3B1 354 aa11.86□□□□□ -0.51
LRRK1-207ENST00000531270 UBL5Q9BZL1 73 aa11.86□□□□□ -0.51
LRRK1-207ENST00000531270 MPZP25189 248 aa11.86□□□□□ -0.51
LRRK1-207ENST00000531270 TDRD15B5MCY1 1934 aaKnown RBP11.86□□□□□ -0.51
LRRK1-207ENST00000531270 IGLV3-19P01714 112 aa11.86□□□□□ -0.51
LRRK1-207ENST00000531270 ANGP03950 147 aaKnown RBP11.85□□□□□ -0.51
LRRK1-207ENST00000531270 Q86TA4 180 aa11.85□□□□□ -0.51
LRRK1-207ENST00000531270 MSMBP08118 114 aa11.85□□□□□ -0.51
LRRK1-207ENST00000531270 MST1LQ2TV78 715 aa11.85□□□□□ -0.51
LRRK1-207ENST00000531270 IGKV1-39P01597 117 aa11.85□□□□□ -0.51
LRRK1-207ENST00000531270 IGKV1D-39P04432 117 aa11.85□□□□□ -0.51
LRRK1-207ENST00000531270 APOC4P55056 127 aa11.85□□□□□ -0.51
LRRK1-207ENST00000531270 IGKV2D-24A0A075B6R9 120 aa11.85□□□□□ -0.51
LRRK1-207ENST00000531270 I3L3M4 83 aa11.85□□□□□ -0.51
LRRK1-207ENST00000531270 RPP25LQ8N5L8 163 aaKnown RBP11.85□□□□□ -0.51
LRRK1-207ENST00000531270 RMI2Q96E14 147 aa11.85□□□□□ -0.51
LRRK1-207ENST00000531270 TMEM243Q9BU79 118 aa11.85□□□□□ -0.51
LRRK1-207ENST00000531270 RSPO3Q9BXY4 272 aaPredicted RBP11.85□□□□□ -0.51
LRRK1-207ENST00000531270 DKK4Q9UBT3 224 aa11.85□□□□□ -0.51
LRRK1-207ENST00000531270 STRCQ7RTU9 1775 aa11.84□□□□□ -0.51
LRRK1-207ENST00000531270 RS1O15537 224 aa11.84□□□□□ -0.51
LRRK1-207ENST00000531270 EFNA2O43921 213 aa11.84□□□□□ -0.51
LRRK1-207ENST00000531270 SPTBP11277 2137 aa11.84□□□□□ -0.51
LRRK1-207ENST00000531270 KIAA1217Q5T5P2 1943 aa11.84□□□□□ -0.51
LRRK1-207ENST00000531270 A0A0J9YY99 117 aa11.84□□□□□ -0.51
LRRK1-207ENST00000531270 INAFM2P0DMQ5 153 aa11.84□□□□□ -0.51
LRRK1-207ENST00000531270 ZMAT4Q9H898 229 aa11.84□□□□□ -0.51
LRRK1-207ENST00000531270 Q9HAA7 133 aa11.84□□□□□ -0.51
LRRK1-207ENST00000531270 IGHV4-4A0A075B6R2 117 aa11.84□□□□□ -0.51
LRRK1-207ENST00000531270 IGLV3-32A0A0A0MS00 114 aa11.84□□□□□ -0.51
LRRK1-207ENST00000531270 IGLV2-23P01705 113 aa11.84□□□□□ -0.51
LRRK1-207ENST00000531270 RNASE13Q5GAN3 156 aaKnown RBP11.84□□□□□ -0.51
LRRK1-207ENST00000531270 GFI1Q99684 422 aa11.84□□□□□ -0.51
LRRK1-207ENST00000531270 IGKV1D-17A0A075B6S4 117 aa11.84□□□□□ -0.51
LRRK1-207ENST00000531270 ESPL1Q14674 2120 aa11.84□□□□□ -0.51
LRRK1-207ENST00000531270 G3V318 75 aa11.83□□□□□ -0.52
LRRK1-207ENST00000531270 PRSS57Q6UWY2 283 aa11.83□□□□□ -0.52
LRRK1-207ENST00000531270 C5orf63A6NC05 138 aa11.83□□□□□ -0.52
LRRK1-207ENST00000531270 FGF16O43320 207 aa11.83□□□□□ -0.52
LRRK1-207ENST00000531270 IGKV1-16P04430 117 aa11.83□□□□□ -0.52
LRRK1-207ENST00000531270 CRYGCP07315 174 aa11.83□□□□□ -0.52
LRRK1-207ENST00000531270 PRR30Q53SZ7 412 aaPredicted RBP11.83□□□□□ -0.52
LRRK1-207ENST00000531270 ARHGEF17Q96PE2 2063 aaPredicted RBP11.83□□□□□ -0.52
LRRK1-207ENST00000531270 IGHG4P01861 327 aa11.82□□□□□ -0.52
LRRK1-207ENST00000531270 HLA-DRB4P13762 266 aa11.82□□□□□ -0.52
LRRK1-207ENST00000531270 HLA-DRB4X5D2U9 266 aa11.82□□□□□ -0.52
LRRK1-207ENST00000531270 NTN3O00634 580 aaPredicted RBP11.82□□□□□ -0.52
LRRK1-207ENST00000531270 C1orf194Q5T5A4 169 aa11.82□□□□□ -0.52
LRRK1-207ENST00000531270 SHANK2-AS3Q9BTD1 123 aa11.82□□□□□ -0.52
LRRK1-207ENST00000531270 ZNF581Q9P0T4 197 aa11.82□□□□□ -0.52
LRRK1-207ENST00000531270 ARAP2Q8WZ64 1704 aa11.82□□□□□ -0.52
LRRK1-207ENST00000531270 TRBV24-1A0A075B6N3 115 aa11.82□□□□□ -0.52
LRRK1-207ENST00000531270 E7EQL1 145 aa11.82□□□□□ -0.52
LRRK1-207ENST00000531270 LYPD1Q8N2G4 141 aa11.82□□□□□ -0.52
LRRK1-207ENST00000531270 MRPL52Q86TS9 123 aaKnown RBP11.82□□□□□ -0.52
LRRK1-207ENST00000531270 RNASE2P10153 161 aaKnown RBP11.81□□□□□ -0.52
LRRK1-207ENST00000531270 C2orf66Q6UXQ4 117 aa11.81□□□□□ -0.52
LRRK1-207ENST00000531270 FBLN5Q9UBX5 448 aa11.81□□□□□ -0.52
LRRK1-207ENST00000531270 AHCTF1Q8WYP5 2266 aa11.81□□□□□ -0.52
LRRK1-207ENST00000531270 RALGAPA1Q6GYQ0 2036 aa11.81□□□□□ -0.52
LRRK1-207ENST00000531270 LYPD3O95274 346 aa11.81□□□□□ -0.52
LRRK1-207ENST00000531270 HS3ST6Q96QI5 342 aa11.81□□□□□ -0.52
LRRK1-207ENST00000531270 RHODO00212 210 aa11.81□□□□□ -0.52
LRRK1-207ENST00000531270 NDUFB8O95169 186 aa11.81□□□□□ -0.52
LRRK1-207ENST00000531270 CHKB-CPT1BH3BT56 60 aa11.8□□□□□ -0.52
LRRK1-207ENST00000531270 IGHV1OR15-1A0A075B7D0 117 aa11.8□□□□□ -0.52
LRRK1-207ENST00000531270 ZNF124Q15973 351 aa11.8□□□□□ -0.52
LRRK1-207ENST00000531270 CR1LQ2VPA4 569 aa11.8□□□□□ -0.52
LRRK1-207ENST00000531270 RPL18AQ02543 176 aaKnown RBP11.8□□□□□ -0.52
LRRK1-207ENST00000531270 Q6ZQT7 251 aa11.8□□□□□ -0.52
LRRK1-207ENST00000531270 COL18A1P39060 1754 aa11.8□□□□□ -0.52
LRRK1-207ENST00000531270 DLEU1O43261 78 aa11.8□□□□□ -0.52
LRRK1-207ENST00000531270 TMEM14EPQ6UXP3 125 aa11.8□□□□□ -0.52
LRRK1-207ENST00000531270 TMEM141Q96I45 108 aa11.8□□□□□ -0.52
LRRK1-207ENST00000531270 CABIN1Q9Y6J0 2220 aa11.79□□□□□ -0.52
LRRK1-207ENST00000531270 CASP8AP2Q9UKL3 1982 aa11.79□□□□□ -0.52
LRRK1-207ENST00000531270 C15orf62A8K5M9 175 aa11.79□□□□□ -0.52
LRRK1-207ENST00000531270 FLVCR1-AS1Q8TAF5 88 aa11.79□□□□□ -0.52
LRRK1-207ENST00000531270 NHSL1Q5SYE7 1610 aa11.79□□□□□ -0.52
LRRK1-207ENST00000531270 IGHV4-28A0A0C4DH34 117 aa11.79□□□□□ -0.52
LRRK1-207ENST00000531270 COLCA2A8K830 154 aa11.79□□□□□ -0.52
LRRK1-207ENST00000531270 MST1P26927 711 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms