RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 GAGE12FP0CL80 117 aa9.16□□□□□ -0.94
HIF3A-214ENST00000531043 GAGE12GP0CL81 117 aa9.16□□□□□ -0.94
HIF3A-214ENST00000531043 GAGE12IP0CL82 117 aa9.16□□□□□ -0.94
HIF3A-214ENST00000531043 RPL7P18124 248 aaKnown RBP9.16□□□□□ -0.94
HIF3A-214ENST00000531043 VAMP1P23763 118 aa9.16□□□□□ -0.94
HIF3A-214ENST00000531043 DYNC2LI1Q8TCX1 351 aa9.16□□□□□ -0.94
HIF3A-214ENST00000531043 TMEM263Q8WUH6 116 aaKnown RBP9.16□□□□□ -0.94
HIF3A-214ENST00000531043 RPUSD4Q96CM3 377 aaKnown RBP9.16□□□□□ -0.94
HIF3A-214ENST00000531043 CIB3Q96Q77 187 aaPredicted RBP9.16□□□□□ -0.94
HIF3A-214ENST00000531043 UPK3BQ9BT76 320 aa9.16□□□□□ -0.94
HIF3A-214ENST00000531043 RABL2BQ9UNT1 228 aa9.16□□□□□ -0.94
HIF3A-214ENST00000531043 PMS2P5A8MQ11 134 aa9.15□□□□□ -0.94
HIF3A-214ENST00000531043 H3BTX0 84 aa9.15□□□□□ -0.94
HIF3A-214ENST00000531043 SFT2D2O95562 160 aa9.15□□□□□ -0.94
HIF3A-214ENST00000531043 OR5G3P0C626 314 aa9.15□□□□□ -0.94
HIF3A-214ENST00000531043 LINC00869P0C866 280 aa9.15□□□□□ -0.94
HIF3A-214ENST00000531043 BTF3P20290 206 aaKnown RBP9.15□□□□□ -0.94
HIF3A-214ENST00000531043 M6PRP20645 277 aa9.15□□□□□ -0.94
HIF3A-214ENST00000531043 CDKN1BP46527 198 aa9.15□□□□□ -0.94
HIF3A-214ENST00000531043 RAP2BP61225 183 aa9.15□□□□□ -0.94
HIF3A-214ENST00000531043 PPP1R1AQ13522 171 aa9.15□□□□□ -0.94
HIF3A-214ENST00000531043 TMEM128Q5BJH2 165 aa9.15□□□□□ -0.94
HIF3A-214ENST00000531043 GFI1BQ5VTD9 330 aa9.15□□□□□ -0.94
HIF3A-214ENST00000531043 ZNF493Q6ZR52 646 aa9.15□□□□□ -0.94
HIF3A-214ENST00000531043 Q6ZRN7 208 aaPredicted RBP9.15□□□□□ -0.94
HIF3A-214ENST00000531043 ZBTB8BQ8NAP8 495 aaPredicted RBP9.15□□□□□ -0.94
HIF3A-214ENST00000531043 MRPS16Q9Y3D3 137 aaKnown RBP9.15□□□□□ -0.94
HIF3A-214ENST00000531043 STRAPQ9Y3F4 350 aaKnown RBP9.15□□□□□ -0.94
HIF3A-214ENST00000531043 TNFSF8P32971 234 aa9.14□□□□□ -0.95
HIF3A-214ENST00000531043 LINC00315P59091 139 aa9.14□□□□□ -0.95
HIF3A-214ENST00000531043 PLP1P60201 277 aa9.14□□□□□ -0.95
HIF3A-214ENST00000531043 POLR2GP62487 172 aaKnown RBP eCLIP9.14□□□□□ -0.95
HIF3A-214ENST00000531043 RPP30P78346 268 aaKnown RBP9.14□□□□□ -0.95
HIF3A-214ENST00000531043 TTC32Q5I0X7 151 aa9.14□□□□□ -0.95
HIF3A-214ENST00000531043 OR10J6PQ8NGY7 276 aa9.14□□□□□ -0.95
HIF3A-214ENST00000531043 TRIM63Q969Q1 353 aa9.14□□□□□ -0.95
HIF3A-214ENST00000531043 CCDC59Q9P031 241 aaKnown RBP9.14□□□□□ -0.95
HIF3A-214ENST00000531043 RSL24D1Q9UHA3 163 aaKnown RBP9.14□□□□□ -0.95
HIF3A-214ENST00000531043 VPS13BQ7Z7G8 4022 aa9.14□□□□□ -0.95
HIF3A-214ENST00000531043 MYCBP2O75592 4640 aa9.13□□□□□ -0.95
HIF3A-214ENST00000531043 LINC00854A0A1B0GVQ3 168 aa9.13□□□□□ -0.95
HIF3A-214ENST00000531043 EPM2AB3EWF7 344 aa9.13□□□□□ -0.95
HIF3A-214ENST00000531043 H7BYZ3 331 aa9.13□□□□□ -0.95
HIF3A-214ENST00000531043 J3KRW8 73 aa9.13□□□□□ -0.95
HIF3A-214ENST00000531043 SLC17A3O00476 420 aa9.13□□□□□ -0.95
HIF3A-214ENST00000531043 XGP55808 180 aa9.13□□□□□ -0.95
HIF3A-214ENST00000531043 RRAS2P62070 204 aaPredicted RBP9.13□□□□□ -0.95
HIF3A-214ENST00000531043 SLC38A11Q08AI6 406 aa9.13□□□□□ -0.95
HIF3A-214ENST00000531043 MORN5Q5VZ52 161 aa9.13□□□□□ -0.95
HIF3A-214ENST00000531043 LRRC20Q8TCA0 184 aa9.13□□□□□ -0.95
HIF3A-214ENST00000531043 ZNF503Q96F45 646 aa9.13□□□□□ -0.95
HIF3A-214ENST00000531043 VSIG2Q96IQ7 327 aa9.13□□□□□ -0.95
HIF3A-214ENST00000531043 SLIRPQ9GZT3 109 aaKnown RBP9.13□□□□□ -0.95
HIF3A-214ENST00000531043 TMPRSS5Q9H3S3 457 aa9.13□□□□□ -0.95
HIF3A-214ENST00000531043 ZNF331Q9NQX6 463 aaPredicted RBP9.13□□□□□ -0.95
HIF3A-214ENST00000531043 RABL2AQ9UBK7 228 aaPredicted RBP9.13□□□□□ -0.95
HIF3A-214ENST00000531043 TNFRSF18Q9Y5U5 241 aa9.13□□□□□ -0.95
HIF3A-214ENST00000531043 A0A096LPF7 62 aa9.12□□□□□ -0.95
HIF3A-214ENST00000531043 FABP12A6NFH5 140 aa9.12□□□□□ -0.95
HIF3A-214ENST00000531043 ADAP1O75689 374 aa9.12□□□□□ -0.95
HIF3A-214ENST00000531043 S100A7P31151 101 aa9.12□□□□□ -0.95
HIF3A-214ENST00000531043 ID3Q02535 119 aa9.12□□□□□ -0.95
HIF3A-214ENST00000531043 Q6ZTI0 123 aa9.12□□□□□ -0.95
HIF3A-214ENST00000531043 ARL6Q9H0F7 186 aa9.12□□□□□ -0.95
HIF3A-214ENST00000531043 ARV1Q9H2C2 271 aa9.12□□□□□ -0.95
HIF3A-214ENST00000531043 PSENENQ9NZ42 101 aa9.12□□□□□ -0.95
HIF3A-214ENST00000531043 A0A1W2PPQ1 181 aa9.11□□□□□ -0.95
HIF3A-214ENST00000531043 METTL15P1P0C7V9 234 aa9.11□□□□□ -0.95
HIF3A-214ENST00000531043 INAFM2P0DMQ5 153 aa9.11□□□□□ -0.95
HIF3A-214ENST00000531043 CT45A10P0DMU9 189 aa9.11□□□□□ -0.95
HIF3A-214ENST00000531043 ANXA7P20073 488 aaKnown RBP9.11□□□□□ -0.95
HIF3A-214ENST00000531043 CCDC190Q86UF4 302 aa9.11□□□□□ -0.95
HIF3A-214ENST00000531043 TRAV12-3A0A0B4J271 114 aa9.1□□□□□ -0.95
HIF3A-214ENST00000531043 SSSCA1O60232 199 aa9.1□□□□□ -0.95
HIF3A-214ENST00000531043 RLN2P04090 185 aa9.1□□□□□ -0.95
HIF3A-214ENST00000531043 ARL16Q0P5N6 197 aa9.1□□□□□ -0.95
HIF3A-214ENST00000531043 LYPD1Q8N2G4 141 aa9.1□□□□□ -0.95
HIF3A-214ENST00000531043 MRPS26Q9BYN8 205 aaKnown RBP9.1□□□□□ -0.95
HIF3A-214ENST00000531043 PIGBOS1A0A0B4J2F0 54 aa9.09□□□□□ -0.95
HIF3A-214ENST00000531043 H3BNG1 76 aa9.09□□□□□ -0.95
HIF3A-214ENST00000531043 H3BQ15 152 aa9.09□□□□□ -0.95
HIF3A-214ENST00000531043 KRTAP10-1P60331 282 aa9.09□□□□□ -0.95
HIF3A-214ENST00000531043 SELENOTP62341 195 aa9.09□□□□□ -0.95
HIF3A-214ENST00000531043 TMEM14EPQ6UXP3 125 aa9.09□□□□□ -0.95
HIF3A-214ENST00000531043 CCDC28AQ8IWP9 274 aa9.09□□□□□ -0.95
HIF3A-214ENST00000531043 TOMM5Q8N4H5 51 aa9.09□□□□□ -0.95
HIF3A-214ENST00000531043 MCFD2Q8NI22 146 aa9.09□□□□□ -0.95
HIF3A-214ENST00000531043 TMEM37Q8WXS4 190 aa9.09□□□□□ -0.95
HIF3A-214ENST00000531043 C20orf144Q9BQM9 153 aa9.09□□□□□ -0.95
HIF3A-214ENST00000531043 SRRM2Q9UQ35 2752 aaKnown RBP9.08□□□□□ -0.96
HIF3A-214ENST00000531043 SNURFLB1AK76 121 aa9.08□□□□□ -0.96
HIF3A-214ENST00000531043 K7EPK0 472 aa9.08□□□□□ -0.96
HIF3A-214ENST00000531043 DNAH10OSP0CZ25 163 aa9.08□□□□□ -0.96
HIF3A-214ENST00000531043 CXCL2P19875 107 aa9.08□□□□□ -0.96
HIF3A-214ENST00000531043 FAUP35544 74 aaKnown RBP9.08□□□□□ -0.96
HIF3A-214ENST00000531043 OPCMLQ14982 345 aa9.08□□□□□ -0.96
HIF3A-214ENST00000531043 PYDC2Q56P42 97 aa9.08□□□□□ -0.96
HIF3A-214ENST00000531043 LCN15Q6UWW0 184 aa9.08□□□□□ -0.96
HIF3A-214ENST00000531043 LINC00305Q7Z4B0 112 aa9.08□□□□□ -0.96
HIF3A-214ENST00000531043 C11orf72Q8NBR9 251 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms