RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 CITED4Q96RK1 184 aa11.89□□□□□ -0.51
BRK1-201ENST00000530758 OR51M1Q9H341 326 aa11.89□□□□□ -0.51
BRK1-201ENST00000530758 ZNF586Q9NXT0 402 aa11.89□□□□□ -0.51
BRK1-201ENST00000530758 UBQLN2Q9UHD9 624 aa11.89□□□□□ -0.51
BRK1-201ENST00000530758 ZNF688P0C7X2 276 aa11.88□□□□□ -0.51
BRK1-201ENST00000530758 C4BPBP20851 252 aa11.88□□□□□ -0.51
BRK1-201ENST00000530758 DEFB131AP59861 70 aa11.88□□□□□ -0.51
BRK1-201ENST00000530758 PDE6HQ13956 83 aa11.88□□□□□ -0.51
BRK1-201ENST00000530758 DEFB121Q5J5C9 76 aa11.88□□□□□ -0.51
BRK1-201ENST00000530758 PQLC2Q6ZP29 291 aa11.88□□□□□ -0.51
BRK1-201ENST00000530758 C16orf92Q96LL3 132 aa11.88□□□□□ -0.51
BRK1-201ENST00000530758 SLC50A1Q9BRV3 221 aa11.88□□□□□ -0.51
BRK1-201ENST00000530758 WFDC10AQ9H1F0 79 aa11.88□□□□□ -0.51
BRK1-201ENST00000530758 ZNF331Q9NQX6 463 aaPredicted RBP11.88□□□□□ -0.51
BRK1-201ENST00000530758 CLEC5AQ9NY25 188 aa11.88□□□□□ -0.51
BRK1-201ENST00000530758 PLA2G2EQ9NZK7 142 aa11.88□□□□□ -0.51
BRK1-201ENST00000530758 COL7A1Q02388 2944 aa11.87□□□□□ -0.51
BRK1-201ENST00000530758 TRBV19A0A075B6N1 114 aa11.87□□□□□ -0.51
BRK1-201ENST00000530758 STAG3L2P0CL84 134 aa11.87□□□□□ -0.51
BRK1-201ENST00000530758 STAG3L3P0CL85 134 aa11.87□□□□□ -0.51
BRK1-201ENST00000530758 CDC34P49427 236 aaPredicted RBP11.87□□□□□ -0.51
BRK1-201ENST00000530758 KHDC3LQ587J8 217 aa11.87□□□□□ -0.51
BRK1-201ENST00000530758 FAM122CQ6P4D5 195 aa11.87□□□□□ -0.51
BRK1-201ENST00000530758 APRG1Q8IVJ8 170 aa11.87□□□□□ -0.51
BRK1-201ENST00000530758 FXYD5Q96DB9 178 aa11.87□□□□□ -0.51
BRK1-201ENST00000530758 PAXXQ9BUH6 204 aa11.87□□□□□ -0.51
BRK1-201ENST00000530758 ACTR3CQ9C0K3 210 aaPredicted RBP11.87□□□□□ -0.51
BRK1-201ENST00000530758 SRD5A3Q9H8P0 318 aa11.87□□□□□ -0.51
BRK1-201ENST00000530758 UMAD1C9J7I0 102 aa11.86□□□□□ -0.51
BRK1-201ENST00000530758 NBEAP1P0C6P0 100 aa11.86□□□□□ -0.51
BRK1-201ENST00000530758 PYYP10082 97 aa11.86□□□□□ -0.51
BRK1-201ENST00000530758 PSMG4Q5JS54 123 aa11.86□□□□□ -0.51
BRK1-201ENST00000530758 AKR1C8PQ5T2L2 129 aa11.86□□□□□ -0.51
BRK1-201ENST00000530758 SUN5Q8TC36 379 aa11.86□□□□□ -0.51
BRK1-201ENST00000530758 RNF141Q8WVD5 230 aa11.86□□□□□ -0.51
BRK1-201ENST00000530758 RAB24Q969Q5 203 aa11.86□□□□□ -0.51
BRK1-201ENST00000530758 TUBA4BQ9H853 241 aa11.86□□□□□ -0.51
BRK1-201ENST00000530758 AGRNO00468 2067 aa11.86□□□□□ -0.51
BRK1-201ENST00000530758 RBMY1BA6NDE4 496 aaKnown RBP11.85□□□□□ -0.51
BRK1-201ENST00000530758 RBMY1EA6NEQ0 496 aaKnown RBP11.85□□□□□ -0.51
BRK1-201ENST00000530758 NDUFB4O95168 129 aa11.85□□□□□ -0.51
BRK1-201ENST00000530758 RBMY1DP0C7P1 496 aaKnown RBP11.85□□□□□ -0.51
BRK1-201ENST00000530758 FRMD6-AS1P0C7T7 363 aa11.85□□□□□ -0.51
BRK1-201ENST00000530758 ZNF726P1Q15940 193 aa11.85□□□□□ -0.51
BRK1-201ENST00000530758 ZNF124Q15973 351 aa11.85□□□□□ -0.51
BRK1-201ENST00000530758 EIF5AL1Q6IS14 154 aaKnown RBP11.85□□□□□ -0.51
BRK1-201ENST00000530758 C20orf173Q96LM9 149 aa11.85□□□□□ -0.51
BRK1-201ENST00000530758 CTXND1A0A1B0GTU2 59 aa11.84□□□□□ -0.51
BRK1-201ENST00000530758 SLC17A3O00476 420 aa11.84□□□□□ -0.51
BRK1-201ENST00000530758 OR7C2O60412 319 aa11.84□□□□□ -0.51
BRK1-201ENST00000530758 PSG9Q00887 426 aa11.84□□□□□ -0.51
BRK1-201ENST00000530758 PSG3Q16557 428 aa11.84□□□□□ -0.51
BRK1-201ENST00000530758 DPPA3Q6W0C5 159 aa11.84□□□□□ -0.51
BRK1-201ENST00000530758 LYPD1Q8N2G4 141 aa11.84□□□□□ -0.51
BRK1-201ENST00000530758 LRRC20Q8TCA0 184 aa11.84□□□□□ -0.51
BRK1-201ENST00000530758 LINC00052Q96N35 136 aa11.84□□□□□ -0.51
BRK1-201ENST00000530758 CLUHP3Q96NS8 147 aa11.84□□□□□ -0.51
BRK1-201ENST00000530758 B9D2Q9BPU9 175 aa11.84□□□□□ -0.51
BRK1-201ENST00000530758 SAV1Q9H4B6 383 aaPredicted RBP11.84□□□□□ -0.51
BRK1-201ENST00000530758 LOC102724200A0A096LPH7 203 aaPredicted RBP11.83□□□□□ -0.52
BRK1-201ENST00000530758 NKX2-5P52952 324 aaPredicted RBP11.83□□□□□ -0.52
BRK1-201ENST00000530758 FOXI2Q6ZQN5 318 aa11.83□□□□□ -0.52
BRK1-201ENST00000530758 SSX7Q7RTT5 188 aa11.83□□□□□ -0.52
BRK1-201ENST00000530758 KIR2DL5BA0A0G2JN68 375 aa11.82□□□□□ -0.52
BRK1-201ENST00000530758 KIR2DL5BA0A0G2JPC4 375 aa11.82□□□□□ -0.52
BRK1-201ENST00000530758 A8MTW9 85 aa11.82□□□□□ -0.52
BRK1-201ENST00000530758 H3BMM0 161 aa11.82□□□□□ -0.52
BRK1-201ENST00000530758 CXorf1O96002 111 aa11.82□□□□□ -0.52
BRK1-201ENST00000530758 SNRPCP09234 159 aaKnown RBP11.82□□□□□ -0.52
BRK1-201ENST00000530758 OR10J4P0C629 311 aa11.82□□□□□ -0.52
BRK1-201ENST00000530758 RAB5CP51148 216 aa11.82□□□□□ -0.52
BRK1-201ENST00000530758 IGFL4Q6B9Z1 124 aa11.82□□□□□ -0.52
BRK1-201ENST00000530758 TRPT1Q86TN4 253 aaKnown RBP11.82□□□□□ -0.52
BRK1-201ENST00000530758 KIR2DL5AQ8N109 375 aa11.82□□□□□ -0.52
BRK1-201ENST00000530758 RNF182Q8N6D2 247 aa11.82□□□□□ -0.52
BRK1-201ENST00000530758 KIR2DL5BQ8NHK3 375 aa11.82□□□□□ -0.52
BRK1-201ENST00000530758 TMED6Q8WW62 240 aa11.82□□□□□ -0.52
BRK1-201ENST00000530758 MBD3L1Q8WWY6 194 aa11.82□□□□□ -0.52
BRK1-201ENST00000530758 MRPL53Q96EL3 112 aaKnown RBP11.82□□□□□ -0.52
BRK1-201ENST00000530758 PHYHIPLQ96FC7 376 aa11.82□□□□□ -0.52
BRK1-201ENST00000530758 PRELID1Q9Y255 219 aa11.82□□□□□ -0.52
BRK1-201ENST00000530758 A0A0J9YX75 114 aa11.81□□□□□ -0.52
BRK1-201ENST00000530758 H3BTX0 84 aa11.81□□□□□ -0.52
BRK1-201ENST00000530758 HMGB3O15347 200 aaKnown RBP11.81□□□□□ -0.52
BRK1-201ENST00000530758 EIF3GO75821 320 aaKnown RBP eCLIP11.81□□□□□ -0.52
BRK1-201ENST00000530758 ARL14EPLP0DKL9 152 aa11.81□□□□□ -0.52
BRK1-201ENST00000530758 HLA-DRB4P13762 266 aa11.81□□□□□ -0.52
BRK1-201ENST00000530758 HLA-DMBP28068 263 aa11.81□□□□□ -0.52
BRK1-201ENST00000530758 UBE2L3P68036 154 aaKnown RBP11.81□□□□□ -0.52
BRK1-201ENST00000530758 BLNKQ8WV28 456 aa11.81□□□□□ -0.52
BRK1-201ENST00000530758 HLA-DRB4X5D2U9 266 aa11.81□□□□□ -0.52
BRK1-201ENST00000530758 KNCNA6PVL3 124 aa11.8□□□□□ -0.52
BRK1-201ENST00000530758 GCHFRP30047 84 aa11.8□□□□□ -0.52
BRK1-201ENST00000530758 FHITP49789 147 aa11.8□□□□□ -0.52
BRK1-201ENST00000530758 SULT1A2P50226 295 aa11.8□□□□□ -0.52
BRK1-201ENST00000530758 HAGHQ16775 308 aa11.8□□□□□ -0.52
BRK1-201ENST00000530758 ACTL10Q5JWF8 245 aa11.8□□□□□ -0.52
BRK1-201ENST00000530758 GDF5OSQ5U4N7 250 aa11.8□□□□□ -0.52
BRK1-201ENST00000530758 SBSPONQ8IVN8 264 aa11.8□□□□□ -0.52
BRK1-201ENST00000530758 STHQ8IWL8 128 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 463.2 ms