RNA–Protein interactions for RNA: ENST00000529677.1

PACS1-208, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-208ENST00000529677 SMAD5-AS1Q9Y6J3 95 aa12.62□□□□□ -0.39
PACS1-208ENST00000529677 TRAV2A0A0B4J234 112 aa12.61□□□□□ -0.39
PACS1-208ENST00000529677 IGLC2P0DOY2 106 aa12.61□□□□□ -0.39
PACS1-208ENST00000529677 GALR1P47211 349 aa12.61□□□□□ -0.39
PACS1-208ENST00000529677 PQLC2Q6ZP29 291 aa12.61□□□□□ -0.39
PACS1-208ENST00000529677 MBD3L1Q8WWY6 194 aa12.61□□□□□ -0.39
PACS1-208ENST00000529677 ZNF503Q96F45 646 aa12.61□□□□□ -0.39
PACS1-208ENST00000529677 FHITP49789 147 aa12.6□□□□□ -0.39
PACS1-208ENST00000529677 MEOX2P50222 304 aa12.6□□□□□ -0.39
PACS1-208ENST00000529677 FAM74A1Q5RGS3 127 aa12.6□□□□□ -0.39
PACS1-208ENST00000529677 LCN12Q6JVE5 192 aa12.6□□□□□ -0.39
PACS1-208ENST00000529677 FAM213BQ8TBF2 198 aa12.6□□□□□ -0.39
PACS1-208ENST00000529677 SPAG8Q99932 426 aaPredicted RBP12.6□□□□□ -0.39
PACS1-208ENST00000529677 IZUMO1RA6ND01 250 aa12.59□□□□□ -0.39
PACS1-208ENST00000529677 ZNF680Q8NEM1 530 aa12.59□□□□□ -0.39
PACS1-208ENST00000529677 SUN5Q8TC36 379 aa12.59□□□□□ -0.39
PACS1-208ENST00000529677 RNF141Q8WVD5 230 aa12.59□□□□□ -0.39
PACS1-208ENST00000529677 OR51M1Q9H341 326 aa12.59□□□□□ -0.39
PACS1-208ENST00000529677 HRH4Q9H3N8 390 aa12.59□□□□□ -0.39
PACS1-208ENST00000529677 NRN1Q9NPD7 142 aa12.59□□□□□ -0.39
PACS1-208ENST00000529677 TRAV1-1A0A0B4J248 108 aa12.58□□□□□ -0.4
PACS1-208ENST00000529677 ZNF785A8K8V0 405 aa12.58□□□□□ -0.4
PACS1-208ENST00000529677 SOCS3O14543 225 aa12.58□□□□□ -0.4
PACS1-208ENST00000529677 PYYP10082 97 aa12.58□□□□□ -0.4
PACS1-208ENST00000529677 HIST1H1EP10412 219 aaKnown RBP12.58□□□□□ -0.4
PACS1-208ENST00000529677 GUK1Q16774 197 aa12.58□□□□□ -0.4
PACS1-208ENST00000529677 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.58□□□□□ -0.4
PACS1-208ENST00000529677 RBPMS2Q6ZRY4 209 aaKnown RBP12.58□□□□□ -0.4
PACS1-208ENST00000529677 DCANP1Q8TF63 244 aa12.58□□□□□ -0.4
PACS1-208ENST00000529677 FXYD5Q96DB9 178 aa12.58□□□□□ -0.4
PACS1-208ENST00000529677 PAXXQ9BUH6 204 aa12.58□□□□□ -0.4
PACS1-208ENST00000529677 MS4A6AQ9H2W1 248 aa12.58□□□□□ -0.4
PACS1-208ENST00000529677 MAP1LC3B2A6NCE7 125 aa12.57□□□□□ -0.4
PACS1-208ENST00000529677 H3BQ15 152 aa12.57□□□□□ -0.4
PACS1-208ENST00000529677 K7EQG2 157 aa12.57□□□□□ -0.4
PACS1-208ENST00000529677 OR7C2O60412 319 aa12.57□□□□□ -0.4
PACS1-208ENST00000529677 ZNF253O75346 499 aa12.57□□□□□ -0.4
PACS1-208ENST00000529677 EIF3GO75821 320 aaKnown RBP eCLIP12.57□□□□□ -0.4
PACS1-208ENST00000529677 CXorf1O96002 111 aa12.57□□□□□ -0.4
PACS1-208ENST00000529677 IFNA7P01567 189 aa12.57□□□□□ -0.4
PACS1-208ENST00000529677 ARL14EPLP0DKL9 152 aa12.57□□□□□ -0.4
PACS1-208ENST00000529677 ATF4P18848 351 aaPredicted RBP12.57□□□□□ -0.4
PACS1-208ENST00000529677 SAMD13Q5VXD3 122 aa12.57□□□□□ -0.4
PACS1-208ENST00000529677 SAT2Q96F10 170 aaPredicted RBP12.57□□□□□ -0.4
PACS1-208ENST00000529677 MAP1LC3BQ9GZQ8 125 aa12.57□□□□□ -0.4
PACS1-208ENST00000529677 ZNF256Q9Y2P7 627 aaPredicted RBP12.57□□□□□ -0.4
PACS1-208ENST00000529677 SELENOKQ9Y6D0 94 aa12.57□□□□□ -0.4
PACS1-208ENST00000529677 ALMS1Q8TCU4 4167 aa12.57□□□□□ -0.4
PACS1-208ENST00000529677 OR4C46A6NHA9 309 aa12.56□□□□□ -0.4
PACS1-208ENST00000529677 HMGB3O15347 200 aaKnown RBP12.56□□□□□ -0.4
PACS1-208ENST00000529677 H2AFB1P0C5Y9 115 aa12.56□□□□□ -0.4
PACS1-208ENST00000529677 GCHFRP30047 84 aa12.56□□□□□ -0.4
PACS1-208ENST00000529677 UBE2L3P68036 154 aaKnown RBP12.56□□□□□ -0.4
PACS1-208ENST00000529677 PAFAH1B2P68402 229 aa12.56□□□□□ -0.4
PACS1-208ENST00000529677 IFITM2Q01629 132 aa12.56□□□□□ -0.4
PACS1-208ENST00000529677 PDE6HQ13956 83 aa12.56□□□□□ -0.4
PACS1-208ENST00000529677 LCN15Q6UWW0 184 aa12.56□□□□□ -0.4
PACS1-208ENST00000529677 LRRC20Q8TCA0 184 aa12.56□□□□□ -0.4
PACS1-208ENST00000529677 ASCL2Q99929 193 aa12.56□□□□□ -0.4
PACS1-208ENST00000529677 ZNF586Q9NXT0 402 aa12.56□□□□□ -0.4
PACS1-208ENST00000529677 TRBV19A0A075B6N1 114 aa12.55□□□□□ -0.4
PACS1-208ENST00000529677 NBEAP1P0C6P0 100 aa12.55□□□□□ -0.4
PACS1-208ENST00000529677 UBQLN2Q9UHD9 624 aa12.55□□□□□ -0.4
PACS1-208ENST00000529677 ZNF705EA8MWA4 302 aaPredicted RBP12.54□□□□□ -0.4
PACS1-208ENST00000529677 ISLRO14498 428 aa12.54□□□□□ -0.4
PACS1-208ENST00000529677 NDUFB4O95168 129 aa12.54□□□□□ -0.4
PACS1-208ENST00000529677 OR10J4P0C629 311 aa12.54□□□□□ -0.4
PACS1-208ENST00000529677 RPL11P62913 178 aaKnown RBP12.54□□□□□ -0.4
PACS1-208ENST00000529677 BLOC1S1P78537 153 aa12.54□□□□□ -0.4
PACS1-208ENST00000529677 LYPD6BQ8NI32 183 aa12.54□□□□□ -0.4
PACS1-208ENST00000529677 SFT2D1Q8WV19 159 aa12.54□□□□□ -0.4
PACS1-208ENST00000529677 SLC50A1Q9BRV3 221 aa12.54□□□□□ -0.4
PACS1-208ENST00000529677 ZNF331Q9NQX6 463 aaPredicted RBP12.54□□□□□ -0.4
PACS1-208ENST00000529677 TMEM167BQ9NRX6 74 aa12.54□□□□□ -0.4
PACS1-208ENST00000529677 ZMAT5Q9UDW3 170 aaKnown RBP12.54□□□□□ -0.4
PACS1-208ENST00000529677 TRAV8-2A0A0B4J237 113 aa12.53□□□□□ -0.4
PACS1-208ENST00000529677 SLC17A3O00476 420 aa12.53□□□□□ -0.4
PACS1-208ENST00000529677 HBE1P02100 147 aa12.53□□□□□ -0.4
PACS1-208ENST00000529677 PSMB3P49720 205 aa12.53□□□□□ -0.4
PACS1-208ENST00000529677 FGF8P55075 233 aaPredicted RBP12.53□□□□□ -0.4
PACS1-208ENST00000529677 ZNF767PQ75MW2 155 aa12.53□□□□□ -0.4
PACS1-208ENST00000529677 GBGT1Q8N5D6 347 aa12.53□□□□□ -0.4
PACS1-208ENST00000529677 FAM110AQ9BQ89 295 aa12.53□□□□□ -0.4
PACS1-208ENST00000529677 IGKV3-7A0A075B6H7 116 aa12.52□□□□□ -0.41
PACS1-208ENST00000529677 DNASE2O00115 360 aaPredicted RBP12.52□□□□□ -0.41
PACS1-208ENST00000529677 PMS2P11Q13670 270 aa12.52□□□□□ -0.41
PACS1-208ENST00000529677 GUCA2BQ16661 112 aa12.52□□□□□ -0.41
PACS1-208ENST00000529677 LYPD1Q8N2G4 141 aa12.52□□□□□ -0.41
PACS1-208ENST00000529677 CLEC5AQ9NY25 188 aa12.52□□□□□ -0.41
PACS1-208ENST00000529677 ARL2-SNX15V9GYD0 113 aa12.52□□□□□ -0.41
PACS1-208ENST00000529677 SORL1Q92673 2214 aa12.52□□□□□ -0.41
PACS1-208ENST00000529677 TEX46H3BTG2 121 aa12.51□□□□□ -0.41
PACS1-208ENST00000529677 TFPI2P48307 235 aa12.51□□□□□ -0.41
PACS1-208ENST00000529677 FAM24BQ8N5W8 94 aa12.51□□□□□ -0.41
PACS1-208ENST00000529677 TMPRSS5Q9H3S3 457 aa12.51□□□□□ -0.41
PACS1-208ENST00000529677 H3BTX0 84 aa12.5□□□□□ -0.41
PACS1-208ENST00000529677 NMBP08949 121 aa12.5□□□□□ -0.41
PACS1-208ENST00000529677 SNRPCP09234 159 aaKnown RBP12.5□□□□□ -0.41
PACS1-208ENST00000529677 ID1P41134 155 aa12.5□□□□□ -0.41
PACS1-208ENST00000529677 PPT1P50897 306 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms