RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 IGKV1-17P01599 117 aa6.26□□□□□ -1.41
SSBP3-212ENST00000528930 APOHP02749 345 aaPredicted RBP6.26□□□□□ -1.41
SSBP3-212ENST00000528930 RAB4AP20338 218 aa6.26□□□□□ -1.41
SSBP3-212ENST00000528930 VAMP1P23763 118 aa6.26□□□□□ -1.41
SSBP3-212ENST00000528930 TAS2R60P59551 318 aa6.26□□□□□ -1.41
SSBP3-212ENST00000528930 FABP9Q0Z7S8 132 aa6.26□□□□□ -1.41
SSBP3-212ENST00000528930 IL15RAQ13261 267 aa6.26□□□□□ -1.41
SSBP3-212ENST00000528930 FAM90A2PQ658T7 463 aa6.26□□□□□ -1.41
SSBP3-212ENST00000528930 TMEM116Q8NCL8 245 aa6.26□□□□□ -1.41
SSBP3-212ENST00000528930 RNASEH2CQ8TDP1 164 aaKnown RBP6.26□□□□□ -1.41
SSBP3-212ENST00000528930 DTD1Q8TEA8 209 aa6.26□□□□□ -1.41
SSBP3-212ENST00000528930 RNF126Q9BV68 326 aa6.26□□□□□ -1.41
SSBP3-212ENST00000528930 GGACTQ9BVM4 153 aa6.26□□□□□ -1.41
SSBP3-212ENST00000528930 VSIRQ9H7M9 311 aa6.26□□□□□ -1.41
SSBP3-212ENST00000528930 PUS1Q9Y606 427 aaKnown RBP eCLIP6.26□□□□□ -1.41
SSBP3-212ENST00000528930 TRAV30A0A087WSZ9 112 aa6.25□□□□□ -1.41
SSBP3-212ENST00000528930 PIGBOS1A0A0B4J2F0 54 aa6.25□□□□□ -1.41
SSBP3-212ENST00000528930 SFTA3P0C7M3 94 aa6.25□□□□□ -1.41
SSBP3-212ENST00000528930 IGLC1P0CG04 106 aa6.25□□□□□ -1.41
SSBP3-212ENST00000528930 SLC25A6P12236 298 aa6.25□□□□□ -1.41
SSBP3-212ENST00000528930 NPY1RP25929 384 aa6.25□□□□□ -1.41
SSBP3-212ENST00000528930 PKIAP61925 76 aa6.25□□□□□ -1.41
SSBP3-212ENST00000528930 ODF3L2Q3SX64 289 aa6.25□□□□□ -1.41
SSBP3-212ENST00000528930 TIGITQ495A1 244 aa6.25□□□□□ -1.41
SSBP3-212ENST00000528930 MRPL52Q86TS9 123 aaKnown RBP6.25□□□□□ -1.41
SSBP3-212ENST00000528930 STRAPQ9Y3F4 350 aaKnown RBP6.25□□□□□ -1.41
SSBP3-212ENST00000528930 C7orf77A4D0Y5 90 aa6.24□□□□□ -1.41
SSBP3-212ENST00000528930 ZNF705EA8MWA4 302 aaPredicted RBP6.24□□□□□ -1.41
SSBP3-212ENST00000528930 FAM90A26D6RGX4 464 aa6.24□□□□□ -1.41
SSBP3-212ENST00000528930 SEC11BP0C7V7 166 aa6.24□□□□□ -1.41
SSBP3-212ENST00000528930 CRYBB3P26998 211 aa6.24□□□□□ -1.41
SSBP3-212ENST00000528930 RND2P52198 227 aa6.24□□□□□ -1.41
SSBP3-212ENST00000528930 GGNBP1Q5YKI7 109 aa6.24□□□□□ -1.41
SSBP3-212ENST00000528930 NPIPB3Q92617 1050 aa6.24□□□□□ -1.41
SSBP3-212ENST00000528930 YPEL4Q96NS1 127 aa6.24□□□□□ -1.41
SSBP3-212ENST00000528930 PFDN5Q99471 154 aa6.24□□□□□ -1.41
SSBP3-212ENST00000528930 FAM110AQ9BQ89 295 aa6.24□□□□□ -1.41
SSBP3-212ENST00000528930 GINS3Q9BRX5 216 aa6.24□□□□□ -1.41
SSBP3-212ENST00000528930 RETNQ9HD89 108 aa6.24□□□□□ -1.41
SSBP3-212ENST00000528930 SCRT2Q9NQ03 307 aa6.24□□□□□ -1.41
SSBP3-212ENST00000528930 MYCBP2O75592 4640 aa6.24□□□□□ -1.41
SSBP3-212ENST00000528930 LOC102724200A0A096LPH7 203 aaPredicted RBP6.23□□□□□ -1.41
SSBP3-212ENST00000528930 IGHV3-66A0A0C4DH42 116 aa6.23□□□□□ -1.41
SSBP3-212ENST00000528930 OR4C46A6NHA9 309 aa6.23□□□□□ -1.41
SSBP3-212ENST00000528930 NDUFS6O75380 124 aaKnown RBP6.23□□□□□ -1.41
SSBP3-212ENST00000528930 ADAP1O75689 374 aa6.23□□□□□ -1.41
SSBP3-212ENST00000528930 DFFBO76075 338 aa6.23□□□□□ -1.41
SSBP3-212ENST00000528930 IAPPP10997 89 aa6.23□□□□□ -1.41
SSBP3-212ENST00000528930 NPPCP23582 126 aa6.23□□□□□ -1.41
SSBP3-212ENST00000528930 S100A2P29034 98 aa6.23□□□□□ -1.41
SSBP3-212ENST00000528930 OR10J1P30954 320 aa6.23□□□□□ -1.41
SSBP3-212ENST00000528930 PPT1P50897 306 aa6.23□□□□□ -1.41
SSBP3-212ENST00000528930 ATP5IP56385 69 aaPredicted RBP6.23□□□□□ -1.41
SSBP3-212ENST00000528930 YPEL3P61236 119 aaPredicted RBP6.23□□□□□ -1.41
SSBP3-212ENST00000528930 ETFRF1Q6IPR1 90 aa6.23□□□□□ -1.41
SSBP3-212ENST00000528930 TCF24Q7RTU0 167 aa6.23□□□□□ -1.41
SSBP3-212ENST00000528930 C2orf50Q96LR7 162 aa6.23□□□□□ -1.41
SSBP3-212ENST00000528930 PBDC1Q9BVG4 233 aa6.23□□□□□ -1.41
SSBP3-212ENST00000528930 SCRT1Q9BWW7 348 aa6.23□□□□□ -1.41
SSBP3-212ENST00000528930 TMEM242Q9NWH2 141 aa6.23□□□□□ -1.41
SSBP3-212ENST00000528930 HMCN2Q8NDA2 5059 aa6.23□□□□□ -1.41
SSBP3-212ENST00000528930 IGKV3-7A0A075B6H7 116 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 IGKV1D-37A0A075B6S9 117 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 PRSS29PA6NIE9 313 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 B4DEV8 164 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 PRSS46E5RG02 174 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 SYNGR2O43760 224 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 TFPI2P48307 235 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 GAMTQ14353 236 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 GBGT1Q8N5D6 347 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 ARL6IP6Q8N6S5 226 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 OR10G4Q8NGN3 311 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 C2CD4CQ8TF44 421 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 Q8WTZ3 238 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 ACY3Q96HD9 319 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 C14orf144Q96I85 54 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 METTL26Q96S19 204 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 NEU1Q99519 415 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 GGTLC1Q9BX51 225 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 MAGT1Q9H0U3 335 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 SLC35B3Q9H1N7 401 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 MS4A6AQ9H2W1 248 aa6.22□□□□□ -1.41
SSBP3-212ENST00000528930 FLG2Q5D862 2391 aaPredicted RBP6.22□□□□□ -1.41
SSBP3-212ENST00000528930 TRAV2A0A0B4J234 112 aa6.21□□□□□ -1.42
SSBP3-212ENST00000528930 A0A1W2PS18 150 aa6.21□□□□□ -1.42
SSBP3-212ENST00000528930 TSTD3H0UI37 97 aa6.21□□□□□ -1.42
SSBP3-212ENST00000528930 SCGB2A1O75556 95 aa6.21□□□□□ -1.42
SSBP3-212ENST00000528930 MED6O75586 246 aa6.21□□□□□ -1.42
SSBP3-212ENST00000528930 TOMM40O96008 361 aa6.21□□□□□ -1.42
SSBP3-212ENST00000528930 PSG1P11464 419 aa6.21□□□□□ -1.42
SSBP3-212ENST00000528930 BMI1P35226 326 aa6.21□□□□□ -1.42
SSBP3-212ENST00000528930 USF2Q15853 346 aaPredicted RBP6.21□□□□□ -1.42
SSBP3-212ENST00000528930 CEMP1Q6PRD7 247 aaPredicted RBP6.21□□□□□ -1.42
SSBP3-212ENST00000528930 APRG1Q8IVJ8 170 aa6.21□□□□□ -1.42
SSBP3-212ENST00000528930 FAM24BQ8N5W8 94 aa6.21□□□□□ -1.42
SSBP3-212ENST00000528930 OR4D5Q8NGN0 318 aa6.21□□□□□ -1.42
SSBP3-212ENST00000528930 TMED6Q8WW62 240 aa6.21□□□□□ -1.42
SSBP3-212ENST00000528930 C18orf15Q96N68 181 aa6.21□□□□□ -1.42
SSBP3-212ENST00000528930 OVOL2Q9BRP0 275 aa6.21□□□□□ -1.42
SSBP3-212ENST00000528930 TMEM231Q9H6L2 316 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms