RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 SIGLEC16A6NMB1 481 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 ZNF670-ZNF695F2Z2N8 137 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 C5orf67F2Z3F1 127 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 C17orf112F2Z3M2 114 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 H3BPC8 53 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 LY6LH3BQJ8 138 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 BUB1B-PAK6H3BSN5 160 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 J3QLW9 94 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 K7EP13 123 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 GNGT2O14610 69 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 LECT2O14960 151 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 IGKV1-5P01602 117 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 IGLV3-27P01718 113 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 C1QBP02746 253 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 CD3DP04234 171 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 SLC25A5P05141 298 aaKnown RBP0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 SPINK8P0C7L1 97 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 IGHV3-30-3P0DP02 117 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 GZMBP10144 247 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 SLC25A4P12235 298 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 IFITM1P13164 125 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 ZNF22P17026 224 aaPredicted RBP0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 GPX2P18283 190 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 BRS3P32247 399 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 ZNF80P51504 273 aaPredicted RBP0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 POLR2JP52435 117 aaKnown RBP0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 FOXA3P55318 350 aaPredicted RBP0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 NPC2P61916 151 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 GNG11P61952 73 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 UBA52P62987 128 aaKnown RBP0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 UBE2L3P68036 154 aaKnown RBP0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 RBM3P98179 157 aaKnown RBP0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 PEA15Q15121 130 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 KISS1Q15726 138 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 MIAQ16674 131 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 ESRGQ1W209 222 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 FAM229BQ4G0N7 80 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 TMEM155Q4W5P6 130 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 LINC01554Q52M75 96 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 FAM74A1Q5RGS3 127 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 GLYATL3Q5SZD4 288 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 MIC13Q5XKP0 118 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 C22orf39Q6P5X5 142 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 SFTA2Q6UW10 78 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 C2orf82Q6UX34 121 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 C7orf65Q6ZTY9 151 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 DEFB128Q7Z7B8 93 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 LYPD6Q86Y78 171 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 ATOH7Q8N100 152 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 C4orf33Q8N1A6 199 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 C1orf158Q8N1D5 194 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 RPP25LQ8N5L8 163 aaKnown RBP0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 ZFAND2AQ8N6M9 145 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 FAM213BQ8TBF2 198 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 ZNF418Q8TF45 676 aaPredicted RBP0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 POP5Q969H6 163 aaKnown RBP0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 MUCL1Q96DR8 90 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 MCEEQ96PE7 176 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 MRPL57Q9BQC6 102 aaKnown RBP0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 TMEM133Q9H2Q1 129 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 PRO1933Q9H354 126 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 MANBALQ9NQG1 85 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 SAR1AQ9NR31 198 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 TMEM242Q9NWH2 141 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 NDUFB11Q9NX14 153 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 NHP2Q9NX24 153 aaKnown RBP0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 TAS2R4Q9NYW5 299 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 HHLA3Q9XRX5 114 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 ZNF443Q9Y2A4 671 aaPredicted RBP0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 RNF11Q9Y3C5 154 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 ROBO3Q96MS0 1386 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 NUP153P49790 1475 aaKnown RBP0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 ANKRD12Q6UB98 2062 aa0.65□□□□□ -2.31
ECHDC1-219ENST00000526299 SEC16AO15027 2179 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 DISP2A7MBM2 1401 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 BCL9O00512 1426 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 SSH2Q76I76 1423 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 SETD5Q9C0A6 1442 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 TRBV20-1A0A075B6N2 111 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 TRAV7A0A075B6U4 112 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 A0A087WX48 190 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 TRBV27A0A0K0K1C4 114 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 TCRBV4S1A1TA0A5B7 111 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 C9orf170A2RU37 121 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 TMEM235A6NFC5 223 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 CRYM-AS1A6NIL9 109 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 TMEM262E9PQX1 116 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 F8W1H4 67 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 H3BRM9 83 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 CCDC179H3BU77 68 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 CORTO00230 105 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 UQCRQO14949 82 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 GNRH2O43555 120 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 YPEL1O60688 119 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 HYPMO75409 117 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 ERC2-IT1O76042 136 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 UBL3O95164 117 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 NDUFB2O95178 105 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 SHBGP04278 402 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 LINC00032P0C843 101 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms