RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 LY6DQ14210 128 aa11.15□□□□□ -0.62
LRRK1-202ENST00000525284 XCL2Q9UBD3 114 aa11.15□□□□□ -0.62
LRRK1-202ENST00000525284 CHCHD2Q9Y6H1 151 aaPredicted RBP11.15□□□□□ -0.62
LRRK1-202ENST00000525284 SCN2AQ99250 2005 aa11.15□□□□□ -0.62
LRRK1-202ENST00000525284 IGKV1D-8A0A087WSZ0 117 aa11.15□□□□□ -0.62
LRRK1-202ENST00000525284 KLK9Q9UKQ9 250 aa11.15□□□□□ -0.62
LRRK1-202ENST00000525284 TRAV26-2A0A0B4J265 109 aa11.15□□□□□ -0.63
LRRK1-202ENST00000525284 XIRP1Q702N8 1843 aaKnown RBP11.14□□□□□ -0.63
LRRK1-202ENST00000525284 FAM166AQ6J272 317 aa11.14□□□□□ -0.63
LRRK1-202ENST00000525284 C9orf106Q8NAJ2 232 aa11.14□□□□□ -0.63
LRRK1-202ENST00000525284 RHPN1-AS1Q9BWJ2 59 aa11.14□□□□□ -0.63
LRRK1-202ENST00000525284 COLQQ9Y215 455 aaPredicted RBP11.14□□□□□ -0.63
LRRK1-202ENST00000525284 A0A096LPF7 62 aa11.14□□□□□ -0.63
LRRK1-202ENST00000525284 MRPL55Q7Z7F7 128 aaKnown RBP11.14□□□□□ -0.63
LRRK1-202ENST00000525284 LYZL4Q96KX0 146 aa11.14□□□□□ -0.63
LRRK1-202ENST00000525284 LINC00479Q96M42 142 aa11.14□□□□□ -0.63
LRRK1-202ENST00000525284 BAALC-AS2P0C853 105 aa11.14□□□□□ -0.63
LRRK1-202ENST00000525284 SAP25Q8TEE9 199 aa11.14□□□□□ -0.63
LRRK1-202ENST00000525284 DEFB131AP59861 70 aa11.14□□□□□ -0.63
LRRK1-202ENST00000525284 SPATA25Q9BR10 227 aa11.14□□□□□ -0.63
LRRK1-202ENST00000525284 TRIP12Q14669 1992 aaPredicted RBP11.14□□□□□ -0.63
LRRK1-202ENST00000525284 THSD7AQ9UPZ6 1657 aa11.14□□□□□ -0.63
LRRK1-202ENST00000525284 WNK3Q9BYP7 1800 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 BVES-AS1Q5T3Y7 98 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 BRD3OSQ6XYD6 125 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 SMRP1Q8NCR6 262 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 CTHRC1Q96CG8 243 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 C8orf49Q96NF6 230 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 ESPL1Q14674 2120 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 Q86TA4 180 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 IGHV1-3A0A0C4DH29 117 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 IGKV3D-7A0A0C4DH55 119 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 HLA-DRB4P13762 266 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 HLA-DRB4X5D2U9 266 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 TAF1LQ8IZX4 1826 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 ATG2BQ96BY7 2078 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 A0A0A6YYD4 124 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 A0A1B0GW64 132 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 A0A1B0GX51 115 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 J3KT08 172 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 ZNRF2Q8NHG8 242 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 CYTL1Q9NRR1 136 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 ORMDL1Q9P0S3 153 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 LY75O60449 1722 aa11.13□□□□□ -0.63
LRRK1-202ENST00000525284 GATA4P43694 442 aa11.12□□□□□ -0.63
LRRK1-202ENST00000525284 RNASE13Q5GAN3 156 aaKnown RBP11.12□□□□□ -0.63
LRRK1-202ENST00000525284 WISP3O95389 354 aaPredicted RBP11.12□□□□□ -0.63
LRRK1-202ENST00000525284 ACYP1P07311 99 aa11.12□□□□□ -0.63
LRRK1-202ENST00000525284 TRAV1-1A0A0B4J248 108 aa11.12□□□□□ -0.63
LRRK1-202ENST00000525284 H3BUX3 64 aa11.12□□□□□ -0.63
LRRK1-202ENST00000525284 LY96Q9Y6Y9 160 aa11.12□□□□□ -0.63
LRRK1-202ENST00000525284 A0A087WV48 116 aa11.12□□□□□ -0.63
LRRK1-202ENST00000525284 NTF4P34130 210 aa11.12□□□□□ -0.63
LRRK1-202ENST00000525284 Q8N8P6 123 aa11.12□□□□□ -0.63
LRRK1-202ENST00000525284 MUSTN1Q8IVN3 82 aa11.12□□□□□ -0.63
LRRK1-202ENST00000525284 NRXN2Q9P2S2 1712 aa11.12□□□□□ -0.63
LRRK1-202ENST00000525284 RBBP6Q7Z6E9 1792 aaKnown RBP11.11□□□□□ -0.63
LRRK1-202ENST00000525284 HLA-DMBP28068 263 aa11.11□□□□□ -0.63
LRRK1-202ENST00000525284 C20orf144Q9BQM9 153 aa11.11□□□□□ -0.63
LRRK1-202ENST00000525284 PAX9P55771 341 aa11.11□□□□□ -0.63
LRRK1-202ENST00000525284 SPINK13Q1W4C9 94 aa11.11□□□□□ -0.63
LRRK1-202ENST00000525284 PLXNB2O15031 1838 aa11.11□□□□□ -0.63
LRRK1-202ENST00000525284 PSMB8P28062 276 aa11.11□□□□□ -0.63
LRRK1-202ENST00000525284 ARHGEF17Q96PE2 2063 aaPredicted RBP11.11□□□□□ -0.63
LRRK1-202ENST00000525284 DOCK9Q9BZ29 2069 aa11.11□□□□□ -0.63
LRRK1-202ENST00000525284 IGKV1-9A0A0C4DH69 117 aa11.11□□□□□ -0.63
LRRK1-202ENST00000525284 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.11□□□□□ -0.63
LRRK1-202ENST00000525284 TMEM200BQ69YZ2 307 aa11.11□□□□□ -0.63
LRRK1-202ENST00000525284 RNF166Q96A37 237 aaPredicted RBP11.11□□□□□ -0.63
LRRK1-202ENST00000525284 FBLN5Q9UBX5 448 aa11.11□□□□□ -0.63
LRRK1-202ENST00000525284 LTBP4Q8N2S1 1624 aa11.11□□□□□ -0.63
LRRK1-202ENST00000525284 MYO16Q9Y6X6 1858 aa11.11□□□□□ -0.63
LRRK1-202ENST00000525284 SMIM10L1P0DMW3 83 aa11.11□□□□□ -0.63
LRRK1-202ENST00000525284 SMIM10Q96HG1 83 aa11.11□□□□□ -0.63
LRRK1-202ENST00000525284 IGHV1-24A0A0C4DH33 117 aa11.1□□□□□ -0.63
LRRK1-202ENST00000525284 M0R1W7 72 aa11.1□□□□□ -0.63
LRRK1-202ENST00000525284 RNASE6Q93091 150 aaKnown RBP11.1□□□□□ -0.63
LRRK1-202ENST00000525284 FUSP35637 526 aaKnown RBP eCLIP11.1□□□□□ -0.63
LRRK1-202ENST00000525284 VWC2Q2TAL6 325 aa11.1□□□□□ -0.63
LRRK1-202ENST00000525284 C18orf32Q8TCD1 76 aa11.1□□□□□ -0.63
LRRK1-202ENST00000525284 CFHR4Q92496 578 aa11.1□□□□□ -0.63
LRRK1-202ENST00000525284 TIMM17AQ99595 171 aa11.1□□□□□ -0.63
LRRK1-202ENST00000525284 GFRA4Q9GZZ7 299 aa11.1□□□□□ -0.63
LRRK1-202ENST00000525284 PTPRFP10586 1907 aa11.1□□□□□ -0.63
LRRK1-202ENST00000525284 COX8AP10176 69 aa11.09□□□□□ -0.63
LRRK1-202ENST00000525284 IGFBPL1Q8WX77 278 aa11.09□□□□□ -0.63
LRRK1-202ENST00000525284 IGHV1-46P01743 117 aa11.09□□□□□ -0.63
LRRK1-202ENST00000525284 ANGP03950 147 aaKnown RBP11.09□□□□□ -0.63
LRRK1-202ENST00000525284 LYPD1Q8N2G4 141 aa11.09□□□□□ -0.63
LRRK1-202ENST00000525284 SDHAF1A6NFY7 115 aa11.09□□□□□ -0.63
LRRK1-202ENST00000525284 OVOL3O00110 214 aa11.09□□□□□ -0.63
LRRK1-202ENST00000525284 IGHV1-8P0DP01 117 aa11.09□□□□□ -0.63
LRRK1-202ENST00000525284 NMSQ5H8A3 153 aa11.09□□□□□ -0.63
LRRK1-202ENST00000525284 FGFBP3Q8TAT2 258 aa11.09□□□□□ -0.63
LRRK1-202ENST00000525284 TMEM190Q8WZ59 177 aa11.09□□□□□ -0.63
LRRK1-202ENST00000525284 ARID2Q68CP9 1835 aa11.09□□□□□ -0.63
LRRK1-202ENST00000525284 SPTBP11277 2137 aa11.09□□□□□ -0.63
LRRK1-202ENST00000525284 HEATR1Q9H583 2144 aaKnown RBP11.09□□□□□ -0.63
LRRK1-202ENST00000525284 TEX48A0A1B0GUV7 120 aa11.09□□□□□ -0.63
LRRK1-202ENST00000525284 CCL25O15444 150 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms