RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 TMEM263Q8WUH6 116 aaKnown RBP16.65■□□□□ 0.26
USP47-205ENST00000525257 TRIM63Q969Q1 353 aa16.65■□□□□ 0.26
USP47-205ENST00000525257 RPUSD4Q96CM3 377 aaKnown RBP16.65■□□□□ 0.26
USP47-205ENST00000525257 GNPNAT1Q96EK6 184 aaPredicted RBP16.65■□□□□ 0.26
USP47-205ENST00000525257 SLIRPQ9GZT3 109 aaKnown RBP16.65■□□□□ 0.26
USP47-205ENST00000525257 SCRT2Q9NQ03 307 aa16.65■□□□□ 0.26
USP47-205ENST00000525257 TRAV26-1A0A087WT03 109 aa16.64■□□□□ 0.25
USP47-205ENST00000525257 AP3S2P59780 193 aa16.64■□□□□ 0.25
USP47-205ENST00000525257 PLP1P60201 277 aa16.63■□□□□ 0.25
USP47-205ENST00000525257 POLR2GP62487 172 aaKnown RBP eCLIP16.63■□□□□ 0.25
USP47-205ENST00000525257 TTC32Q5I0X7 151 aa16.63■□□□□ 0.25
USP47-205ENST00000525257 OR10J6PQ8NGY7 276 aa16.63■□□□□ 0.25
USP47-205ENST00000525257 SLC25A21Q9BQT8 299 aaPredicted RBP16.63■□□□□ 0.25
USP47-205ENST00000525257 PSENENQ9NZ42 101 aa16.63■□□□□ 0.25
USP47-205ENST00000525257 A0A0J9YY99 117 aa16.62■□□□□ 0.25
USP47-205ENST00000525257 H7BYZ3 331 aa16.62■□□□□ 0.25
USP47-205ENST00000525257 KRTAP10-2P60368 255 aa16.62■□□□□ 0.25
USP47-205ENST00000525257 RRAS2P62070 204 aaPredicted RBP16.62■□□□□ 0.25
USP47-205ENST00000525257 SELENOTP62341 195 aa16.62■□□□□ 0.25
USP47-205ENST00000525257 KIR3DS1Q14943 382 aa16.62■□□□□ 0.25
USP47-205ENST00000525257 PYDC2Q56P42 97 aa16.62■□□□□ 0.25
USP47-205ENST00000525257 MCFD2Q8NI22 146 aa16.62■□□□□ 0.25
USP47-205ENST00000525257 PARD6GQ9BYG4 376 aaPredicted RBP16.62■□□□□ 0.25
USP47-205ENST00000525257 ARL6Q9H0F7 186 aa16.62■□□□□ 0.25
USP47-205ENST00000525257 Q9H3A6 140 aa16.62■□□□□ 0.25
USP47-205ENST00000525257 ADAP1O75689 374 aa16.61■□□□□ 0.25
USP47-205ENST00000525257 CCNKO75909 580 aa16.61■□□□□ 0.25
USP47-205ENST00000525257 SNRPCP09234 159 aaKnown RBP16.61■□□□□ 0.25
USP47-205ENST00000525257 ANXA7P20073 488 aaKnown RBP16.61■□□□□ 0.25
USP47-205ENST00000525257 M6PRP20645 277 aa16.61■□□□□ 0.25
USP47-205ENST00000525257 TMBIM6P55061 237 aa16.61■□□□□ 0.25
USP47-205ENST00000525257 RXFP4Q8TDU9 374 aa16.61■□□□□ 0.25
USP47-205ENST00000525257 PMS2P5A8MQ11 134 aa16.6■□□□□ 0.25
USP47-205ENST00000525257 ZNF701M0R085 212 aaPredicted RBP16.6■□□□□ 0.25
USP47-205ENST00000525257 MRPS12O15235 138 aaKnown RBP16.6■□□□□ 0.25
USP47-205ENST00000525257 SSSCA1O60232 199 aa16.6■□□□□ 0.25
USP47-205ENST00000525257 HOXA5P20719 270 aa16.6■□□□□ 0.25
USP47-205ENST00000525257 ID3Q02535 119 aa16.6■□□□□ 0.25
USP47-205ENST00000525257 PATE2Q6UY27 113 aa16.6■□□□□ 0.25
USP47-205ENST00000525257 S100A7AQ86SG5 101 aa16.6■□□□□ 0.25
USP47-205ENST00000525257 BCL7BQ9BQE9 202 aa16.6■□□□□ 0.25
USP47-205ENST00000525257 ARV1Q9H2C2 271 aa16.6■□□□□ 0.25
USP47-205ENST00000525257 GAGE12BA1L429 117 aa16.59■□□□□ 0.25
USP47-205ENST00000525257 GAGE7O76087 117 aa16.59■□□□□ 0.25
USP47-205ENST00000525257 GAGE12FP0CL80 117 aa16.59■□□□□ 0.25
USP47-205ENST00000525257 GAGE12GP0CL81 117 aa16.59■□□□□ 0.25
USP47-205ENST00000525257 GAGE12IP0CL82 117 aa16.59■□□□□ 0.25
USP47-205ENST00000525257 DLK1P80370 383 aa16.59■□□□□ 0.25
USP47-205ENST00000525257 LINC00612Q8N6U2 182 aa16.59■□□□□ 0.25
USP47-205ENST00000525257 SLC38A11Q08AI6 406 aa16.58■□□□□ 0.24
USP47-205ENST00000525257 ESRGQ1W209 222 aa16.58■□□□□ 0.24
USP47-205ENST00000525257 GFI1BQ5VTD9 330 aa16.58■□□□□ 0.24
USP47-205ENST00000525257 LCN15Q6UWW0 184 aa16.58■□□□□ 0.24
USP47-205ENST00000525257 CCDC28AQ8IWP9 274 aa16.58■□□□□ 0.24
USP47-205ENST00000525257 ZNF503Q96F45 646 aa16.58■□□□□ 0.24
USP47-205ENST00000525257 C20orf144Q9BQM9 153 aa16.58■□□□□ 0.24
USP47-205ENST00000525257 UPK3BQ9BT76 320 aa16.58■□□□□ 0.24
USP47-205ENST00000525257 ZNF331Q9NQX6 463 aaPredicted RBP16.58■□□□□ 0.24
USP47-205ENST00000525257 HERC1Q15751 4861 aa16.57■□□□□ 0.24
USP47-205ENST00000525257 H3BMQ9 156 aa16.57■□□□□ 0.24
USP47-205ENST00000525257 METTL15P1P0C7V9 234 aa16.57■□□□□ 0.24
USP47-205ENST00000525257 CXCL2P19875 107 aa16.57■□□□□ 0.24
USP47-205ENST00000525257 CCDC190Q86UF4 302 aa16.57■□□□□ 0.24
USP47-205ENST00000525257 NPVFQ9HCQ7 196 aa16.57■□□□□ 0.24
USP47-205ENST00000525257 PRAC2D3DTV9 90 aa16.56■□□□□ 0.24
USP47-205ENST00000525257 H3BTX0 84 aa16.56■□□□□ 0.24
USP47-205ENST00000525257 NOL3O60936 208 aaKnown RBP16.56■□□□□ 0.24
USP47-205ENST00000525257 RLN2P04090 185 aa16.56■□□□□ 0.24
USP47-205ENST00000525257 SLC50A1Q9BRV3 221 aa16.56■□□□□ 0.24
USP47-205ENST00000525257 ZNF586Q9NXT0 402 aa16.56■□□□□ 0.24
USP47-205ENST00000525257 MRPS16Q9Y3D3 137 aaKnown RBP16.56■□□□□ 0.24
USP47-205ENST00000525257 V9GYH0 126 aa16.56■□□□□ 0.24
USP47-205ENST00000525257 C9orf170A2RU37 121 aa16.55■□□□□ 0.24
USP47-205ENST00000525257 SNURFLB1AK76 121 aa16.55■□□□□ 0.24
USP47-205ENST00000525257 J3KRW8 73 aa16.55■□□□□ 0.24
USP47-205ENST00000525257 K7EPK0 472 aa16.55■□□□□ 0.24
USP47-205ENST00000525257 BTF3P20290 206 aaKnown RBP16.55■□□□□ 0.24
USP47-205ENST00000525257 TEPPQ6URK8 271 aa16.55■□□□□ 0.24
USP47-205ENST00000525257 LINC00305Q7Z4B0 112 aa16.55■□□□□ 0.24
USP47-205ENST00000525257 SMIM8Q96KF7 97 aa16.55■□□□□ 0.24
USP47-205ENST00000525257 MGAT4CQ9UBM8 478 aa16.55■□□□□ 0.24
USP47-205ENST00000525257 RNF24Q9Y225 148 aa16.55■□□□□ 0.24
USP47-205ENST00000525257 A0A1W2PPQ1 181 aa16.54■□□□□ 0.24
USP47-205ENST00000525257 SLC17A3O00476 420 aa16.54■□□□□ 0.24
USP47-205ENST00000525257 TMEM14EPQ6UXP3 125 aa16.54■□□□□ 0.24
USP47-205ENST00000525257 FNDC10F2Z333 226 aa16.53■□□□□ 0.24
USP47-205ENST00000525257 GOSR2O14653 212 aa16.53■□□□□ 0.24
USP47-205ENST00000525257 UBE2MP61081 183 aaKnown RBP16.53■□□□□ 0.24
USP47-205ENST00000525257 OR10P1Q8NGE3 313 aa16.53■□□□□ 0.24
USP47-205ENST00000525257 DEDD2Q8WXF8 326 aa16.53■□□□□ 0.24
USP47-205ENST00000525257 TMPRSS5Q9H3S3 457 aa16.53■□□□□ 0.24
USP47-205ENST00000525257 H3BNG1 76 aa16.52■□□□□ 0.24
USP47-205ENST00000525257 SCGB1D2O95969 90 aa16.52■□□□□ 0.24
USP47-205ENST00000525257 PXDC1Q5TGL8 231 aa16.52■□□□□ 0.24
USP47-205ENST00000525257 ZNF546Q86UE3 836 aa16.52■□□□□ 0.24
USP47-205ENST00000525257 BPIFA4PQ86YQ2 179 aa16.52■□□□□ 0.24
USP47-205ENST00000525257 TRAV12-3A0A0B4J271 114 aa16.51■□□□□ 0.23
USP47-205ENST00000525257 MORN5Q5VZ52 161 aa16.51■□□□□ 0.23
USP47-205ENST00000525257 LINC00854A0A1B0GVQ3 168 aa16.5■□□□□ 0.23
USP47-205ENST00000525257 AGPAT2O15120 278 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms