RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 INSL3P51460 131 aa11.94□□□□□ -0.5
TSPAN4-213ENST00000524895 PAFAH1B2P68402 229 aa11.94□□□□□ -0.5
TSPAN4-213ENST00000524895 CCL20P78556 96 aa11.94□□□□□ -0.5
TSPAN4-213ENST00000524895 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.94□□□□□ -0.5
TSPAN4-213ENST00000524895 GBGT1Q8N5D6 347 aa11.94□□□□□ -0.5
TSPAN4-213ENST00000524895 LYPD6BQ8NI32 183 aa11.94□□□□□ -0.5
TSPAN4-213ENST00000524895 MS4A6AQ9H2W1 248 aa11.94□□□□□ -0.5
TSPAN4-213ENST00000524895 TRAV25A0A0B4J276 109 aa11.93□□□□□ -0.5
TSPAN4-213ENST00000524895 DNASE2O00115 360 aaPredicted RBP11.93□□□□□ -0.5
TSPAN4-213ENST00000524895 IFNA1P01562 189 aa11.93□□□□□ -0.5
TSPAN4-213ENST00000524895 TFPI2P48307 235 aa11.93□□□□□ -0.5
TSPAN4-213ENST00000524895 PDE6HQ13956 83 aa11.93□□□□□ -0.5
TSPAN4-213ENST00000524895 PRR31Q5SQ13 230 aa11.93□□□□□ -0.5
TSPAN4-213ENST00000524895 OR2K2Q8NGT1 345 aa11.93□□□□□ -0.5
TSPAN4-213ENST00000524895 SUN5Q8TC36 379 aa11.93□□□□□ -0.5
TSPAN4-213ENST00000524895 C17orf77Q96MU5 243 aa11.93□□□□□ -0.5
TSPAN4-213ENST00000524895 MANBALQ9NQG1 85 aa11.93□□□□□ -0.5
TSPAN4-213ENST00000524895 GNG13Q9P2W3 67 aa11.93□□□□□ -0.5
TSPAN4-213ENST00000524895 SLC17A3O00476 420 aa11.92□□□□□ -0.5
TSPAN4-213ENST00000524895 TSPAN4O14817 238 aa11.92□□□□□ -0.5
TSPAN4-213ENST00000524895 IGLL1P15814 213 aa11.92□□□□□ -0.5
TSPAN4-213ENST00000524895 UBE2G2P60604 165 aa11.92□□□□□ -0.5
TSPAN4-213ENST00000524895 SAMD13Q5VXD3 122 aa11.92□□□□□ -0.5
TSPAN4-213ENST00000524895 LCN12Q6JVE5 192 aa11.92□□□□□ -0.5
TSPAN4-213ENST00000524895 WFDC3Q8IUB2 231 aa11.92□□□□□ -0.5
TSPAN4-213ENST00000524895 C16orf92Q96LL3 132 aa11.92□□□□□ -0.5
TSPAN4-213ENST00000524895 SLC50A1Q9BRV3 221 aa11.92□□□□□ -0.5
TSPAN4-213ENST00000524895 GPR61Q9BZJ8 451 aa11.92□□□□□ -0.5
TSPAN4-213ENST00000524895 ZNF253O75346 499 aa11.91□□□□□ -0.5
TSPAN4-213ENST00000524895 RANP62826 216 aaKnown RBP11.91□□□□□ -0.5
TSPAN4-213ENST00000524895 PSG9Q00887 426 aa11.91□□□□□ -0.5
TSPAN4-213ENST00000524895 GUCA2BQ16661 112 aa11.91□□□□□ -0.5
TSPAN4-213ENST00000524895 SPAG8Q99932 426 aaPredicted RBP11.91□□□□□ -0.5
TSPAN4-213ENST00000524895 TRAV2A0A0B4J234 112 aa11.9□□□□□ -0.5
TSPAN4-213ENST00000524895 IZUMO1RA6ND01 250 aa11.9□□□□□ -0.5
TSPAN4-213ENST00000524895 OR4C46A6NHA9 309 aa11.9□□□□□ -0.5
TSPAN4-213ENST00000524895 PAGE4O60829 102 aa11.9□□□□□ -0.5
TSPAN4-213ENST00000524895 NDUFB4O95168 129 aa11.9□□□□□ -0.5
TSPAN4-213ENST00000524895 HAGHQ16775 308 aa11.9□□□□□ -0.5
TSPAN4-213ENST00000524895 DCANP1Q8TF63 244 aa11.9□□□□□ -0.5
TSPAN4-213ENST00000524895 Q9H3A6 140 aa11.9□□□□□ -0.5
TSPAN4-213ENST00000524895 AAMDCQ9H7C9 122 aa11.9□□□□□ -0.5
TSPAN4-213ENST00000524895 ZNF331Q9NQX6 463 aaPredicted RBP11.9□□□□□ -0.5
TSPAN4-213ENST00000524895 YTHDF2Q9Y5A9 579 aaKnown RBP11.9□□□□□ -0.5
TSPAN4-213ENST00000524895 ARL2-SNX15V9GYD0 113 aa11.9□□□□□ -0.5
TSPAN4-213ENST00000524895 A0A1W2PRE2 83 aa11.89□□□□□ -0.51
TSPAN4-213ENST00000524895 FAM74A7A6NL05 159 aa11.89□□□□□ -0.51
TSPAN4-213ENST00000524895 K7EQG2 157 aa11.89□□□□□ -0.51
TSPAN4-213ENST00000524895 ISLRO14498 428 aa11.89□□□□□ -0.51
TSPAN4-213ENST00000524895 SOCS3O14543 225 aa11.89□□□□□ -0.51
TSPAN4-213ENST00000524895 BCL2P10415 239 aa11.89□□□□□ -0.51
TSPAN4-213ENST00000524895 ID1P41134 155 aa11.89□□□□□ -0.51
TSPAN4-213ENST00000524895 PMS2P11Q13670 270 aa11.89□□□□□ -0.51
TSPAN4-213ENST00000524895 CST9LP1Q5W188 147 aa11.89□□□□□ -0.51
TSPAN4-213ENST00000524895 LYPD1Q8N2G4 141 aa11.89□□□□□ -0.51
TSPAN4-213ENST00000524895 EXOC3-AS1Q8N2X6 119 aa11.89□□□□□ -0.51
TSPAN4-213ENST00000524895 TAGLN2P37802 199 aaKnown RBP11.88□□□□□ -0.51
TSPAN4-213ENST00000524895 SNRPD3P62318 126 aaKnown RBP11.88□□□□□ -0.51
TSPAN4-213ENST00000524895 ICAM4Q14773 271 aa11.88□□□□□ -0.51
TSPAN4-213ENST00000524895 IGFL4Q6B9Z1 124 aa11.88□□□□□ -0.51
TSPAN4-213ENST00000524895 RNF182Q8N6D2 247 aa11.88□□□□□ -0.51
TSPAN4-213ENST00000524895 NKX6-2Q9C056 277 aaPredicted RBP11.88□□□□□ -0.51
TSPAN4-213ENST00000524895 OTORQ9NRC9 128 aa11.88□□□□□ -0.51
TSPAN4-213ENST00000524895 TRAV8-2A0A0B4J237 113 aa11.87□□□□□ -0.51
TSPAN4-213ENST00000524895 LOC102723971A0A1B0GUV8 181 aa11.87□□□□□ -0.51
TSPAN4-213ENST00000524895 RBFOX3A6NFN3 312 aa11.87□□□□□ -0.51
TSPAN4-213ENST00000524895 GGTLC3B5MD39 225 aa11.87□□□□□ -0.51
TSPAN4-213ENST00000524895 TOR2AQ5JU69 321 aa11.87□□□□□ -0.51
TSPAN4-213ENST00000524895 LINC00052Q96N35 136 aa11.87□□□□□ -0.51
TSPAN4-213ENST00000524895 FAM210AQ96ND0 272 aa11.87□□□□□ -0.51
TSPAN4-213ENST00000524895 EIF5A2Q9GZV4 153 aaKnown RBP11.87□□□□□ -0.51
TSPAN4-213ENST00000524895 CLEC5AQ9NY25 188 aa11.87□□□□□ -0.51
TSPAN4-213ENST00000524895 TRRAPQ9Y4A5 3859 aa11.86□□□□□ -0.51
TSPAN4-213ENST00000524895 PGPA6NDG6 321 aa11.86□□□□□ -0.51
TSPAN4-213ENST00000524895 C11orf94C9JXX5 98 aa11.86□□□□□ -0.51
TSPAN4-213ENST00000524895 WIPF1O43516 503 aa11.86□□□□□ -0.51
TSPAN4-213ENST00000524895 ZNF688P0C7X2 276 aa11.86□□□□□ -0.51
TSPAN4-213ENST00000524895 HLA-DMBP28068 263 aa11.86□□□□□ -0.51
TSPAN4-213ENST00000524895 ATP5G3P48201 142 aa11.86□□□□□ -0.51
TSPAN4-213ENST00000524895 SUMO1P63165 101 aaKnown RBP11.86□□□□□ -0.51
TSPAN4-213ENST00000524895 MEF2BQ02080 365 aaPredicted RBP11.86□□□□□ -0.51
TSPAN4-213ENST00000524895 FAM24BQ8N5W8 94 aa11.86□□□□□ -0.51
TSPAN4-213ENST00000524895 CMTM2Q8TAZ6 248 aa11.86□□□□□ -0.51
TSPAN4-213ENST00000524895 VAX2Q9UIW0 290 aa11.86□□□□□ -0.51
TSPAN4-213ENST00000524895 PRELID1Q9Y255 219 aa11.86□□□□□ -0.51
TSPAN4-213ENST00000524895 SLC25A5P05141 298 aaKnown RBP11.85□□□□□ -0.51
TSPAN4-213ENST00000524895 CSN1S1P47710 185 aa11.85□□□□□ -0.51
TSPAN4-213ENST00000524895 PSG3Q16557 428 aa11.85□□□□□ -0.51
TSPAN4-213ENST00000524895 OXLD1Q5BKU9 147 aa11.85□□□□□ -0.51
TSPAN4-213ENST00000524895 PSMG4Q5JS54 123 aa11.85□□□□□ -0.51
TSPAN4-213ENST00000524895 ZNF506Q5JVG8 444 aa11.85□□□□□ -0.51
TSPAN4-213ENST00000524895 ZNF738Q8NE65 137 aa11.85□□□□□ -0.51
TSPAN4-213ENST00000524895 RXFP4Q8TDU9 374 aa11.85□□□□□ -0.51
TSPAN4-213ENST00000524895 RARRES2Q99969 163 aa11.85□□□□□ -0.51
TSPAN4-213ENST00000524895 TXNDC17Q9BRA2 123 aa11.85□□□□□ -0.51
TSPAN4-213ENST00000524895 RPH3ALQ9UNE2 315 aa11.85□□□□□ -0.51
TSPAN4-213ENST00000524895 ZNF256Q9Y2P7 627 aaPredicted RBP11.85□□□□□ -0.51
TSPAN4-213ENST00000524895 M0R3E3 92 aa11.84□□□□□ -0.51
TSPAN4-213ENST00000524895 C5orf17Q8NAS9 161 aa11.84□□□□□ -0.51
TSPAN4-213ENST00000524895 MRPL53Q96EL3 112 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms