RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 PSMB8P28062 276 aa6.56□□□□□ -1.36
HMGB4-204ENST00000522796 DLX1P56177 255 aa6.56□□□□□ -1.36
HMGB4-204ENST00000522796 VMA21Q3ZAQ7 101 aa6.56□□□□□ -1.36
HMGB4-204ENST00000522796 SFTPA2Q8IWL1 248 aa6.56□□□□□ -1.36
HMGB4-204ENST00000522796 SFTPA1Q8IWL2 248 aa6.56□□□□□ -1.36
HMGB4-204ENST00000522796 C11orf45Q8TAV5 145 aa6.56□□□□□ -1.36
HMGB4-204ENST00000522796 BRK1Q8WUW1 75 aa6.56□□□□□ -1.36
HMGB4-204ENST00000522796 ZNF256Q9Y2P7 627 aaPredicted RBP6.56□□□□□ -1.36
HMGB4-204ENST00000522796 LSM4Q9Y4Z0 139 aaKnown RBP6.56□□□□□ -1.36
HMGB4-204ENST00000522796 UBE2D1P51668 147 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 ZNF56Q15929 161 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 Q6ZPA2 131 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 SLC25A48Q6ZT89 311 aaKnown RBP6.55□□□□□ -1.36
HMGB4-204ENST00000522796 GTSCR1Q86UQ5 136 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 SLC25A45Q8N413 288 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 DCAF4L2Q8NA75 395 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 SHANK2-AS3Q9BTD1 123 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 MYO9BQ13459 2157 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 FREM3P0C091 2139 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 RALGAPA1Q6GYQ0 2036 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 TRAV17A0A0B4J275 112 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 TMEM150CB9EJG8 249 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 HBDP02042 147 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 FCER1GP30273 86 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 CEMP1Q6PRD7 247 aaPredicted RBP6.55□□□□□ -1.36
HMGB4-204ENST00000522796 C11orf53Q8IXP5 236 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 CALYQ9NYX4 217 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 DKK2Q9UBU2 259 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 KIAA1549LQ6ZVL6 1849 aa6.55□□□□□ -1.36
HMGB4-204ENST00000522796 hADV29S1A0JD25 119 aa6.54□□□□□ -1.36
HMGB4-204ENST00000522796 IGF1P05019 195 aa6.54□□□□□ -1.36
HMGB4-204ENST00000522796 KRTAP27-1Q3LI81 207 aa6.54□□□□□ -1.36
HMGB4-204ENST00000522796 Q71RC1 249 aaPredicted RBP6.54□□□□□ -1.36
HMGB4-204ENST00000522796 NFAM1Q8NET5 270 aaPredicted RBP6.54□□□□□ -1.36
HMGB4-204ENST00000522796 NTN5Q8WTR8 489 aaPredicted RBP6.54□□□□□ -1.36
HMGB4-204ENST00000522796 GFRA4Q9GZZ7 299 aa6.54□□□□□ -1.36
HMGB4-204ENST00000522796 RPUSD1Q9UJJ7 312 aaKnown RBP6.54□□□□□ -1.36
HMGB4-204ENST00000522796 COL4A2P08572 1712 aa6.54□□□□□ -1.36
HMGB4-204ENST00000522796 COX6A1P12074 109 aa6.54□□□□□ -1.36
HMGB4-204ENST00000522796 CD40P25942 277 aa6.54□□□□□ -1.36
HMGB4-204ENST00000522796 TMEM52BQ4KMG9 183 aa6.54□□□□□ -1.36
HMGB4-204ENST00000522796 C10orf105Q8TEF2 133 aa6.54□□□□□ -1.36
HMGB4-204ENST00000522796 SHANK1Q9Y566 2161 aa6.54□□□□□ -1.36
HMGB4-204ENST00000522796 TRAV26-2A0A0B4J265 109 aa6.53□□□□□ -1.36
HMGB4-204ENST00000522796 WI2-2373I1.2A0A1W2PRP0 233 aa6.53□□□□□ -1.36
HMGB4-204ENST00000522796 GFERP55789 205 aa6.53□□□□□ -1.36
HMGB4-204ENST00000522796 MRPL55Q7Z7F7 128 aaKnown RBP6.53□□□□□ -1.36
HMGB4-204ENST00000522796 BORCS8Q96FH0 119 aa6.53□□□□□ -1.36
HMGB4-204ENST00000522796 C16orf92Q96LL3 132 aa6.53□□□□□ -1.36
HMGB4-204ENST00000522796 AAMDCQ9H7C9 122 aa6.53□□□□□ -1.36
HMGB4-204ENST00000522796 OTORQ9NRC9 128 aa6.53□□□□□ -1.36
HMGB4-204ENST00000522796 SPRY3O43610 288 aa6.53□□□□□ -1.36
HMGB4-204ENST00000522796 IGKV1D-16P01601 117 aa6.53□□□□□ -1.36
HMGB4-204ENST00000522796 CA6P23280 308 aa6.53□□□□□ -1.36
HMGB4-204ENST00000522796 LOXP28300 417 aaPredicted RBP6.53□□□□□ -1.36
HMGB4-204ENST00000522796 MYCNOSP40205 109 aa6.53□□□□□ -1.36
HMGB4-204ENST00000522796 PRDM14Q9GZV8 571 aa6.53□□□□□ -1.36
HMGB4-204ENST00000522796 DYSFO75923 2080 aa6.52□□□□□ -1.36
HMGB4-204ENST00000522796 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.52□□□□□ -1.37
HMGB4-204ENST00000522796 H3BMM0 161 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 ATOX1O00244 68 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 SPRY2O43597 315 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 PYYP10082 97 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 LIFP15018 202 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 LINC01559Q495D7 138 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 FAM90A1Q86YD7 464 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 DRAM1Q8N682 238 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 UBE2WQ96B02 151 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 C16orf95Q9H693 158 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 C7orf69Q9H7B7 122 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 NXT2Q9NPJ8 142 aaKnown RBP6.52□□□□□ -1.37
HMGB4-204ENST00000522796 KLF13Q9Y2Y9 288 aaPredicted RBP6.52□□□□□ -1.37
HMGB4-204ENST00000522796 GON4LQ3T8J9 2241 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 IGKV1-8A0A0C4DH67 115 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 LYZL6O75951 148 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 IGLV3-1P01715 115 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 STATHP02808 62 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 MIC13Q5XKP0 118 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 MAPKAPK5-AS1Q8N8E1 139 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 PLPPR2Q96GM1 343 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 MGST2Q99735 147 aa6.52□□□□□ -1.37
HMGB4-204ENST00000522796 RPP21Q9H633 154 aaKnown RBP6.52□□□□□ -1.37
HMGB4-204ENST00000522796 FOXS1O43638 330 aa6.51□□□□□ -1.37
HMGB4-204ENST00000522796 DUTP33316 252 aaKnown RBP6.51□□□□□ -1.37
HMGB4-204ENST00000522796 ZNF137PP52743 207 aa6.51□□□□□ -1.37
HMGB4-204ENST00000522796 FAM201AQ5SY85 155 aa6.51□□□□□ -1.37
HMGB4-204ENST00000522796 TMEM170BQ5T4T1 132 aa6.51□□□□□ -1.37
HMGB4-204ENST00000522796 HES3Q5TGS1 186 aa6.51□□□□□ -1.37
HMGB4-204ENST00000522796 Q6ZVL8 140 aa6.51□□□□□ -1.37
HMGB4-204ENST00000522796 PLEKHA3Q9HB20 300 aa6.51□□□□□ -1.37
HMGB4-204ENST00000522796 RNF7Q9UBF6 113 aa6.51□□□□□ -1.37
HMGB4-204ENST00000522796 EPM2AB3EWF7 344 aa6.51□□□□□ -1.37
HMGB4-204ENST00000522796 CXCL5P42830 114 aa6.51□□□□□ -1.37
HMGB4-204ENST00000522796 CFHR1Q03591 330 aa6.51□□□□□ -1.37
HMGB4-204ENST00000522796 PAX8Q06710 450 aa6.51□□□□□ -1.37
HMGB4-204ENST00000522796 TWIST1Q15672 202 aa6.51□□□□□ -1.37
HMGB4-204ENST00000522796 C22orf39Q6P5X5 142 aa6.51□□□□□ -1.37
HMGB4-204ENST00000522796 CD164L2Q6UWJ8 174 aa6.51□□□□□ -1.37
HMGB4-204ENST00000522796 FOXC2Q99958 501 aa6.51□□□□□ -1.37
HMGB4-204ENST00000522796 ZNF442Q9H7R0 627 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms