RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 DUSP14O95147 198 aaKnown RBP11.18□□□□□ -0.62
SYNPO-205ENST00000522122 EMP1P54849 157 aa11.18□□□□□ -0.62
SYNPO-205ENST00000522122 C11orf52Q96A22 123 aa11.18□□□□□ -0.62
SYNPO-205ENST00000522122 TMEM101Q96IK0 257 aa11.18□□□□□ -0.62
SYNPO-205ENST00000522122 ZNRD1Q9P1U0 126 aa11.18□□□□□ -0.62
SYNPO-205ENST00000522122 ZNF138P52744 262 aa11.17□□□□□ -0.62
SYNPO-205ENST00000522122 MPV17L2Q567V2 206 aa11.17□□□□□ -0.62
SYNPO-205ENST00000522122 SFTA2Q6UW10 78 aa11.17□□□□□ -0.62
SYNPO-205ENST00000522122 ODF3L1Q8IXM7 274 aa11.17□□□□□ -0.62
SYNPO-205ENST00000522122 OR13C6PQ8NH95 151 aa11.17□□□□□ -0.62
SYNPO-205ENST00000522122 V9GYV3 84 aa11.17□□□□□ -0.62
SYNPO-205ENST00000522122 TRAV40A0A0B4J280 105 aa11.17□□□□□ -0.62
SYNPO-205ENST00000522122 TEX43Q6ZNM6 134 aa11.17□□□□□ -0.62
SYNPO-205ENST00000522122 Q8TAT8 98 aa11.17□□□□□ -0.62
SYNPO-205ENST00000522122 A0A1B0GV72 72 aa11.17□□□□□ -0.62
SYNPO-205ENST00000522122 SH2D1AO60880 128 aa11.17□□□□□ -0.62
SYNPO-205ENST00000522122 LAGE3Q14657 143 aa11.17□□□□□ -0.62
SYNPO-205ENST00000522122 GUSBP1Q15486 140 aa11.17□□□□□ -0.62
SYNPO-205ENST00000522122 C15orf65H3BRN8 121 aa11.17□□□□□ -0.62
SYNPO-205ENST00000522122 SLC25A2Q9BXI2 301 aa11.17□□□□□ -0.62
SYNPO-205ENST00000522122 NCOR1P1Q9H4R4 102 aa11.17□□□□□ -0.62
SYNPO-205ENST00000522122 PCNX2A6NKB5 2137 aa11.17□□□□□ -0.62
SYNPO-205ENST00000522122 ZNF815PA8K554 130 aa11.16□□□□□ -0.62
SYNPO-205ENST00000522122 M0R1W7 72 aa11.16□□□□□ -0.62
SYNPO-205ENST00000522122 LINC01549A6NIU2 74 aa11.16□□□□□ -0.62
SYNPO-205ENST00000522122 ZNF479Q96JC4 524 aa11.16□□□□□ -0.62
SYNPO-205ENST00000522122 KIR2DL5BA0A0G2JN68 375 aa11.16□□□□□ -0.62
SYNPO-205ENST00000522122 KIR2DL5BA0A0G2JPC4 375 aa11.16□□□□□ -0.62
SYNPO-205ENST00000522122 EFNA4P52798 201 aa11.16□□□□□ -0.62
SYNPO-205ENST00000522122 Q86TA4 180 aa11.16□□□□□ -0.62
SYNPO-205ENST00000522122 KIR2DL5AQ8N109 375 aa11.16□□□□□ -0.62
SYNPO-205ENST00000522122 PRSS22Q9GZN4 317 aa11.16□□□□□ -0.62
SYNPO-205ENST00000522122 HOXA3O43365 443 aaPredicted RBP11.16□□□□□ -0.62
SYNPO-205ENST00000522122 GATA4P43694 442 aa11.16□□□□□ -0.62
SYNPO-205ENST00000522122 NDUFA4L2Q9NRX3 87 aa11.16□□□□□ -0.62
SYNPO-205ENST00000522122 Q6ZPA2 131 aa11.15□□□□□ -0.62
SYNPO-205ENST00000522122 ARFGEF3Q5TH69 2177 aa11.15□□□□□ -0.62
SYNPO-205ENST00000522122 TMEM262E9PQX1 116 aa11.15□□□□□ -0.62
SYNPO-205ENST00000522122 IGLV2-14P01704 120 aa11.15□□□□□ -0.62
SYNPO-205ENST00000522122 RNASE1P07998 156 aaKnown RBP11.15□□□□□ -0.62
SYNPO-205ENST00000522122 GTSCR1Q86UQ5 136 aa11.15□□□□□ -0.62
SYNPO-205ENST00000522122 SRSF8Q9BRL6 282 aaKnown RBP11.15□□□□□ -0.62
SYNPO-205ENST00000522122 PEMTQ9UBM1 199 aa11.15□□□□□ -0.62
SYNPO-205ENST00000522122 LRP4O75096 1905 aa11.15□□□□□ -0.62
SYNPO-205ENST00000522122 COL8A2P25067 703 aa11.15□□□□□ -0.62
SYNPO-205ENST00000522122 UNQ6494/PRO21346Q6UXR6 183 aa11.15□□□□□ -0.62
SYNPO-205ENST00000522122 C10orf142B7Z368 130 aa11.15□□□□□ -0.62
SYNPO-205ENST00000522122 FXYD7P58549 80 aa11.15□□□□□ -0.62
SYNPO-205ENST00000522122 GAGE1Q13065 139 aa11.15□□□□□ -0.62
SYNPO-205ENST00000522122 SAMD5Q5TGI4 173 aa11.15□□□□□ -0.62
SYNPO-205ENST00000522122 TMEM219Q86XT9 240 aa11.15□□□□□ -0.62
SYNPO-205ENST00000522122 SHANK2-AS3Q9BTD1 123 aa11.15□□□□□ -0.62
SYNPO-205ENST00000522122 A0A087X0K7 114 aa11.14□□□□□ -0.63
SYNPO-205ENST00000522122 CD300EQ496F6 205 aaPredicted RBP11.14□□□□□ -0.63
SYNPO-205ENST00000522122 C9orf139Q6ZV77 190 aa11.14□□□□□ -0.63
SYNPO-205ENST00000522122 C18orf32Q8TCD1 76 aa11.14□□□□□ -0.63
SYNPO-205ENST00000522122 GFRA4Q9GZZ7 299 aa11.14□□□□□ -0.63
SYNPO-205ENST00000522122 SRD5A1P18405 259 aa11.14□□□□□ -0.63
SYNPO-205ENST00000522122 AMN1Q8IY45 258 aa11.14□□□□□ -0.63
SYNPO-205ENST00000522122 SMIM27A0A1W2PRY6 76 aa11.14□□□□□ -0.63
SYNPO-205ENST00000522122 BCL6BQ8N143 479 aaPredicted RBP11.14□□□□□ -0.63
SYNPO-205ENST00000522122 MMP23AO75900 390 aa11.14□□□□□ -0.63
SYNPO-205ENST00000522122 PDE6HQ13956 83 aa11.13□□□□□ -0.63
SYNPO-205ENST00000522122 TMEM155Q4W5P6 130 aa11.13□□□□□ -0.63
SYNPO-205ENST00000522122 TOMM7Q9P0U1 55 aa11.13□□□□□ -0.63
SYNPO-205ENST00000522122 E7EQL1 145 aa11.13□□□□□ -0.63
SYNPO-205ENST00000522122 CFHR2P36980 270 aa11.13□□□□□ -0.63
SYNPO-205ENST00000522122 C17orf58Q2M2W7 97 aa11.13□□□□□ -0.63
SYNPO-205ENST00000522122 FAM231BA6NCW3 169 aa11.13□□□□□ -0.63
SYNPO-205ENST00000522122 K7EN84 100 aa11.13□□□□□ -0.63
SYNPO-205ENST00000522122 PF4P02776 101 aa11.13□□□□□ -0.63
SYNPO-205ENST00000522122 PRTN3P24158 256 aa11.13□□□□□ -0.63
SYNPO-205ENST00000522122 IGFL4Q6B9Z1 124 aa11.13□□□□□ -0.63
SYNPO-205ENST00000522122 NAA38Q9BRA0 125 aaKnown RBP11.13□□□□□ -0.63
SYNPO-205ENST00000522122 ARMS2P0C7Q2 107 aa11.13□□□□□ -0.63
SYNPO-205ENST00000522122 GGTLC3B5MD39 225 aa11.12□□□□□ -0.63
SYNPO-205ENST00000522122 LY6HO94772 140 aa11.12□□□□□ -0.63
SYNPO-205ENST00000522122 Q8TCH9 128 aa11.12□□□□□ -0.63
SYNPO-205ENST00000522122 WFDC12Q8WWY7 111 aa11.12□□□□□ -0.63
SYNPO-205ENST00000522122 ZNF492Q9P255 531 aa11.12□□□□□ -0.63
SYNPO-205ENST00000522122 TRBV7-1A0A0A6YYK4 115 aa11.12□□□□□ -0.63
SYNPO-205ENST00000522122 MCRIP2Q9BUT9 160 aaKnown RBP11.12□□□□□ -0.63
SYNPO-205ENST00000522122 LY6DQ14210 128 aa11.12□□□□□ -0.63
SYNPO-205ENST00000522122 TRGV11A0A075B6L2 103 aa11.12□□□□□ -0.63
SYNPO-205ENST00000522122 TRGV2A0A075B6R0 118 aa11.12□□□□□ -0.63
SYNPO-205ENST00000522122 LINC00477Q96M19 166 aa11.12□□□□□ -0.63
SYNPO-205ENST00000522122 ZGRF1Q86YA3 2104 aa11.12□□□□□ -0.63
SYNPO-205ENST00000522122 SMAD7O15105 426 aaKnown RBP11.11□□□□□ -0.63
SYNPO-205ENST00000522122 CNTFRP26992 372 aa11.11□□□□□ -0.63
SYNPO-205ENST00000522122 UBE2V1Q13404 147 aa11.11□□□□□ -0.63
SYNPO-205ENST00000522122 CT83Q5H943 113 aa11.11□□□□□ -0.63
SYNPO-205ENST00000522122 ZNF562Q6V9R5 426 aa11.11□□□□□ -0.63
SYNPO-205ENST00000522122 RNF182Q8N6D2 247 aa11.11□□□□□ -0.63
SYNPO-205ENST00000522122 NDPQ00604 133 aa11.11□□□□□ -0.63
SYNPO-205ENST00000522122 TRAV2A0A0B4J234 112 aa11.11□□□□□ -0.63
SYNPO-205ENST00000522122 SRRM4A7MD48 611 aaKnown RBP11.11□□□□□ -0.63
SYNPO-205ENST00000522122 PLNP26678 52 aa11.11□□□□□ -0.63
SYNPO-205ENST00000522122 ZNF134P52741 427 aa11.11□□□□□ -0.63
SYNPO-205ENST00000522122 C3orf36Q3SXR2 165 aa11.11□□□□□ -0.63
SYNPO-205ENST00000522122 ZC2HC1BQ5TFG8 222 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms