RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 CRYGCP07315 174 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 SEC11BP0C7V7 166 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 SPP1P10451 314 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 ATP6V0CP27449 155 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 RND2P52198 227 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 DEFA5Q01523 94 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 GAMTQ14353 236 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 VWC2Q2TAL6 325 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 AKIRIN2Q53H80 203 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 ETFRF1Q6IPR1 90 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 TMEM182Q6ZP80 229 aaPredicted RBP2.9□□□□□ -1.95
CLK4-207ENST00000520909 SLC16A13Q7RTY0 426 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 TMEM86BQ8N661 226 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 OR1L6Q8NGR2 347 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 ZNF418Q8TF45 676 aaPredicted RBP2.9□□□□□ -1.95
CLK4-207ENST00000520909 PCNPQ8WW12 178 aaKnown RBP2.9□□□□□ -1.95
CLK4-207ENST00000520909 CACNG8Q8WXS5 425 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 PHYHIPLQ96FC7 376 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 NOL4LQ96MY1 436 aaPredicted RBP2.9□□□□□ -1.95
CLK4-207ENST00000520909 MS4A10Q96PG2 267 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 RSG1Q9BU20 258 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 PARD6GQ9BYG4 376 aaPredicted RBP2.9□□□□□ -1.95
CLK4-207ENST00000520909 WDR61Q9GZS3 305 aaKnown RBP2.9□□□□□ -1.95
CLK4-207ENST00000520909 FNDC4Q9H6D8 234 aaPredicted RBP2.9□□□□□ -1.95
CLK4-207ENST00000520909 NPVFQ9HCQ7 196 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 WDR83OSQ9Y284 106 aa2.9□□□□□ -1.95
CLK4-207ENST00000520909 NF1P21359 2839 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 SETD2Q9BYW2 2564 aaPredicted RBP2.89□□□□□ -1.95
CLK4-207ENST00000520909 TEP1Q99973 2627 aaKnown RBP2.89□□□□□ -1.95
CLK4-207ENST00000520909 C2CD3Q4AC94 2353 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 IGLV11-55A0A075B6I3 123 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 ZFP92A6NM28 416 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 ZNF705EA8MWA4 302 aaPredicted RBP2.89□□□□□ -1.95
CLK4-207ENST00000520909 C17orf112F2Z3M2 114 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 H0Y9J4 135 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 I3L2K1 104 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 K7EIM0 57 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 AGPAT2O15120 278 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 MPDU1O75352 247 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 IGHV3-23P01764 117 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 IGF1P05019 195 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 HIST1H1BP16401 226 aaKnown RBP2.89□□□□□ -1.95
CLK4-207ENST00000520909 RPL35AP18077 110 aaKnown RBP2.89□□□□□ -1.95
CLK4-207ENST00000520909 OR10J1P30954 320 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 CAMLGP49069 296 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 SULT1A2P50226 295 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 RHOGP84095 191 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 ATP5G2Q06055 141 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 AKR1C8PQ5T2L2 129 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 MIC13Q5XKP0 118 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 PVRIGQ6DKI7 326 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 TMEM144Q7Z5S9 345 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 FAM213BQ8TBF2 198 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 MGST2Q99735 147 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 NPCDR1Q9BY65 106 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 ZNF702PQ9H963 129 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 ESM1Q9NQ30 184 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 THYN1Q9P016 225 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 MRPL36Q9P0J6 103 aaKnown RBP2.89□□□□□ -1.95
CLK4-207ENST00000520909 TIMM9Q9Y5J7 89 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 S4R3C0 116 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 JMJD1CQ15652 2540 aa2.89□□□□□ -1.95
CLK4-207ENST00000520909 NIPBLQ6KC79 2804 aaeCLIP2.88□□□□□ -1.95
CLK4-207ENST00000520909 FN1P02751 2386 aaKnown RBP2.88□□□□□ -1.95
CLK4-207ENST00000520909 IGKV1OR2-108A0A075B7D4 117 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 TRBV9A0A0B4J1U6 114 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 A0A1B0GV50 99 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 PSMB11A5LHX3 300 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 MFSD2BA6NFX1 497 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 UMAD1C9J7I0 102 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 TEX46H3BTG2 121 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 SOX15O60248 233 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 GNG7O60262 68 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 CLN5O75503 358 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 YIF1AO95070 293 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 MBP02144 154 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 TRGV3P03979 118 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 CRYBA1P05813 215 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 NMBP08949 121 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 LINC00869P0C866 280 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 MDKP21741 143 aaPredicted RBP2.88□□□□□ -1.95
CLK4-207ENST00000520909 RPL29P47914 159 aaKnown RBP2.88□□□□□ -1.95
CLK4-207ENST00000520909 NPBWR1P48145 328 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 FHITP49789 147 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 RAB5CP51148 216 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 TPPP2P59282 170 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 RAB2AP61019 212 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 B2MP61769 119 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 SELENOTP62341 195 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 SLC35B1P78383 322 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 SERF2P84101 59 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 ZNF90Q03938 601 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 ZNF616Q08AN1 781 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 ACOT6Q3I5F7 207 aaPredicted RBP2.88□□□□□ -1.95
CLK4-207ENST00000520909 TIGITQ495A1 244 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 Q56UQ5 140 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 TMEM41BQ5BJD5 291 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 GCSAMLQ5JQS6 135 aa2.88□□□□□ -1.95
CLK4-207ENST00000520909 CLLU1Q5K131 121 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms