RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 M0QZ24 198 aa8.03□□□□□ -1.12
MCF2-209ENST00000520602 LEPROTL1O95214 131 aa8.03□□□□□ -1.12
MCF2-209ENST00000520602 G0S2P27469 103 aa8.03□□□□□ -1.12
MCF2-209ENST00000520602 ARL3P36405 182 aa8.03□□□□□ -1.12
MCF2-209ENST00000520602 YPEL3P61236 119 aaPredicted RBP8.03□□□□□ -1.12
MCF2-209ENST00000520602 PMCHL1Q16048 86 aa8.03□□□□□ -1.12
MCF2-209ENST00000520602 OR8A1Q8NGG7 326 aa8.03□□□□□ -1.12
MCF2-209ENST00000520602 ZFP30Q9Y2G7 519 aa8.03□□□□□ -1.12
MCF2-209ENST00000520602 ADGRG4Q8IZF6 3080 aa8.03□□□□□ -1.12
MCF2-209ENST00000520602 POLQO75417 2590 aa8.03□□□□□ -1.12
MCF2-209ENST00000520602 TRBV19A0A075B6N1 114 aa8.02□□□□□ -1.12
MCF2-209ENST00000520602 INS-IGF2F8WCM5 200 aa8.02□□□□□ -1.12
MCF2-209ENST00000520602 M0R143 59 aa8.02□□□□□ -1.12
MCF2-209ENST00000520602 OR5AL1P0C617 328 aa8.02□□□□□ -1.12
MCF2-209ENST00000520602 CKS2P33552 79 aa8.02□□□□□ -1.12
MCF2-209ENST00000520602 Q86TA4 180 aa8.02□□□□□ -1.12
MCF2-209ENST00000520602 KCNS1Q96KK3 526 aa8.02□□□□□ -1.12
MCF2-209ENST00000520602 NUPR1O60356 82 aa8.02□□□□□ -1.13
MCF2-209ENST00000520602 SPATA45Q537H7 98 aa8.02□□□□□ -1.13
MCF2-209ENST00000520602 TMEM136Q6ZRR5 245 aa8.02□□□□□ -1.13
MCF2-209ENST00000520602 DTX2Q86UW9 622 aa8.02□□□□□ -1.13
MCF2-209ENST00000520602 DYNAPQ8N1N2 210 aa8.02□□□□□ -1.13
MCF2-209ENST00000520602 ZNF324O75467 553 aaPredicted RBP8.02□□□□□ -1.13
MCF2-209ENST00000520602 SLAQ13239 276 aa8.02□□□□□ -1.13
MCF2-209ENST00000520602 SP5Q6BEB4 398 aaPredicted RBP8.02□□□□□ -1.13
MCF2-209ENST00000520602 MOB4Q9Y3A3 225 aa8.02□□□□□ -1.13
MCF2-209ENST00000520602 SONP18583 2426 aaKnown RBP8.02□□□□□ -1.13
MCF2-209ENST00000520602 RAB9AP51151 201 aa8.01□□□□□ -1.13
MCF2-209ENST00000520602 SPANXN1Q5VSR9 72 aa8.01□□□□□ -1.13
MCF2-209ENST00000520602 ZNF664Q8N3J9 261 aa8.01□□□□□ -1.13
MCF2-209ENST00000520602 NRGNQ92686 78 aa8.01□□□□□ -1.13
MCF2-209ENST00000520602 MAP1LC3CQ9BXW4 147 aa8.01□□□□□ -1.13
MCF2-209ENST00000520602 IGHV4-39P01824 125 aa8.01□□□□□ -1.13
MCF2-209ENST00000520602 PRB1P04280 392 aa8.01□□□□□ -1.13
MCF2-209ENST00000520602 CRYGCP07315 174 aa8.01□□□□□ -1.13
MCF2-209ENST00000520602 ZNF138P52744 262 aa8.01□□□□□ -1.13
MCF2-209ENST00000520602 RAI1Q7Z5J4 1906 aaPredicted RBP8.01□□□□□ -1.13
MCF2-209ENST00000520602 GP9P14770 177 aa8.01□□□□□ -1.13
MCF2-209ENST00000520602 C1orf122Q6ZSJ8 110 aa8.01□□□□□ -1.13
MCF2-209ENST00000520602 REC114Q7Z4M0 266 aa8.01□□□□□ -1.13
MCF2-209ENST00000520602 LY6G5BQ8NDX9 201 aa8.01□□□□□ -1.13
MCF2-209ENST00000520602 IGHV7-81A0A0B4J1V7 117 aa8□□□□□ -1.13
MCF2-209ENST00000520602 IGHV4-61A0A0C4DH41 118 aa8□□□□□ -1.13
MCF2-209ENST00000520602 NDUFS6O75380 124 aaKnown RBP8□□□□□ -1.13
MCF2-209ENST00000520602 PSG3Q16557 428 aa8□□□□□ -1.13
MCF2-209ENST00000520602 LDLRAD2Q5SZI1 272 aa8□□□□□ -1.13
MCF2-209ENST00000520602 SRD5A1P18405 259 aa8□□□□□ -1.13
MCF2-209ENST00000520602 PAX8Q06710 450 aa8□□□□□ -1.13
MCF2-209ENST00000520602 LCN12Q6JVE5 192 aa8□□□□□ -1.13
MCF2-209ENST00000520602 NIT1Q86X76 327 aa8□□□□□ -1.13
MCF2-209ENST00000520602 OR4B1Q8NGF8 309 aa8□□□□□ -1.13
MCF2-209ENST00000520602 TMEM191AQ9H0A3 160 aa8□□□□□ -1.13
MCF2-209ENST00000520602 A0A1B0GV90 55 aa8□□□□□ -1.13
MCF2-209ENST00000520602 SMIM27A0A1W2PRY6 76 aa8□□□□□ -1.13
MCF2-209ENST00000520602 H3BRN7 92 aa8□□□□□ -1.13
MCF2-209ENST00000520602 TM4SF20Q53R12 229 aa8□□□□□ -1.13
MCF2-209ENST00000520602 OR10J6PQ8NGY7 276 aa8□□□□□ -1.13
MCF2-209ENST00000520602 GLMPQ8WWB7 406 aa8□□□□□ -1.13
MCF2-209ENST00000520602 C8orf49Q96NF6 230 aa8□□□□□ -1.13
MCF2-209ENST00000520602 APOHP02749 345 aaPredicted RBP7.99□□□□□ -1.13
MCF2-209ENST00000520602 HTN1P15515 57 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 HIST1H1AQ02539 215 aaPredicted RBP7.99□□□□□ -1.13
MCF2-209ENST00000520602 OR10J3Q5JRS4 329 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 RNF182Q8N6D2 247 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 NPBQ8NG41 125 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 AP5S1Q9NUS5 200 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 IGHV1-69DA0A0B4J2H0 117 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 A0A1W2PPR1 153 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 A0A1W2PS18 150 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 IGKV3-20P01619 116 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 IGHV1-69P01742 117 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 GPX1P07203 203 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 HLA-DMBP28068 263 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 C14orf144Q96I85 54 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 IGF2BP2-AS1Q96M15 143 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 CRYGBP07316 175 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 ARMS2P0C7Q2 107 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 ERCC8Q13216 396 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 LCNL1Q6ZST4 164 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 FER1L6-AS1Q8NA97 138 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 FAM110DQ8TAY7 271 aaPredicted RBP7.99□□□□□ -1.13
MCF2-209ENST00000520602 PMCHL2Q9BQD1 86 aa7.99□□□□□ -1.13
MCF2-209ENST00000520602 TTC9CQ8N5M4 171 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 Q8N9W7 124 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 AP1S3Q96PC3 154 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 RCHY1Q96PM5 261 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 DUX5Q96PT3 197 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 HSPB8Q9UJY1 196 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 SOX21Q9Y651 276 aaPredicted RBP7.98□□□□□ -1.13
MCF2-209ENST00000520602 SETD2Q9BYW2 2564 aaPredicted RBP7.98□□□□□ -1.13
MCF2-209ENST00000520602 EPG5Q9HCE0 2579 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 IGLV11-55A0A075B6I3 123 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 FABP5P3A8MUU1 101 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 PRSS1P07477 247 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 C11orf71Q6IPW1 123 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 LYZL1Q6UWQ5 148 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 FAM231DQ6ZW35 169 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 ATP5L2Q7Z4Y8 100 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 CFHR4Q92496 578 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 FANCD2OSQ96PS1 177 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms