RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 SCGB2A1O75556 95 aa5.04□□□□□ -1.6
SDCBP-208ENST00000520228 ADAP1O75689 374 aa5.04□□□□□ -1.6
SDCBP-208ENST00000520228 IFNA21P01568 189 aa5.04□□□□□ -1.6
SDCBP-208ENST00000520228 TCRBP04435 133 aa5.04□□□□□ -1.6
SDCBP-208ENST00000520228 NPY1RP25929 384 aa5.04□□□□□ -1.6
SDCBP-208ENST00000520228 ID1P41134 155 aa5.04□□□□□ -1.6
SDCBP-208ENST00000520228 ATP5IP56385 69 aaPredicted RBP5.04□□□□□ -1.6
SDCBP-208ENST00000520228 KRTAP10-5P60370 271 aa5.04□□□□□ -1.6
SDCBP-208ENST00000520228 GUCA2BQ16661 112 aa5.04□□□□□ -1.6
SDCBP-208ENST00000520228 OR4X1Q8NH49 305 aa5.04□□□□□ -1.6
SDCBP-208ENST00000520228 CACNG8Q8WXS5 425 aa5.04□□□□□ -1.6
SDCBP-208ENST00000520228 MRPL53Q96EL3 112 aaKnown RBP5.04□□□□□ -1.6
SDCBP-208ENST00000520228 B9D2Q9BPU9 175 aa5.04□□□□□ -1.6
SDCBP-208ENST00000520228 C20orf85Q9H1P6 137 aa5.04□□□□□ -1.6
SDCBP-208ENST00000520228 RPS10P5Q9NQ39 176 aa5.04□□□□□ -1.6
SDCBP-208ENST00000520228 DAZ1Q9NQZ3 744 aaKnown RBP5.04□□□□□ -1.6
SDCBP-208ENST00000520228 MRPL27Q9P0M9 148 aaKnown RBP5.04□□□□□ -1.6
SDCBP-208ENST00000520228 SMAD5-AS1Q9Y6J3 95 aa5.04□□□□□ -1.6
SDCBP-208ENST00000520228 U3KQ87 197 aa5.04□□□□□ -1.6
SDCBP-208ENST00000520228 TRAV6A0A075B6T7 132 aa5.03□□□□□ -1.6
SDCBP-208ENST00000520228 ZNF207O43670 478 aaKnown RBP5.03□□□□□ -1.6
SDCBP-208ENST00000520228 MED6O75586 246 aa5.03□□□□□ -1.6
SDCBP-208ENST00000520228 UPK1BO75841 260 aa5.03□□□□□ -1.6
SDCBP-208ENST00000520228 TMEM50AO95807 157 aa5.03□□□□□ -1.6
SDCBP-208ENST00000520228 IFNA4P05014 189 aa5.03□□□□□ -1.6
SDCBP-208ENST00000520228 C8orf88P0DMB2 117 aa5.03□□□□□ -1.6
SDCBP-208ENST00000520228 SLC25A4P12235 298 aa5.03□□□□□ -1.6
SDCBP-208ENST00000520228 ASAH1Q13510 395 aa5.03□□□□□ -1.6
SDCBP-208ENST00000520228 ETFRF1Q6IPR1 90 aa5.03□□□□□ -1.6
SDCBP-208ENST00000520228 MITD1Q8WV92 249 aa5.03□□□□□ -1.6
SDCBP-208ENST00000520228 CIB3Q96Q77 187 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-208ENST00000520228 MAGT1Q9H0U3 335 aa5.03□□□□□ -1.6
SDCBP-208ENST00000520228 NUDT15Q9NV35 164 aa5.03□□□□□ -1.6
SDCBP-208ENST00000520228 MLXQ9UH92 298 aa5.03□□□□□ -1.6
SDCBP-208ENST00000520228 TBC1D24Q9ULP9 559 aa5.03□□□□□ -1.6
SDCBP-208ENST00000520228 PRKDCP78527 4128 aaKnown RBP5.03□□□□□ -1.6
SDCBP-208ENST00000520228 TRAV30A0A087WSZ9 112 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 TRAV14DV4A0A0A6YYC5 116 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 TRAV25A0A0B4J276 109 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 SYNGR2O43760 224 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 IAPPP10997 89 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 RND2P52198 227 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 LAMTOR1Q6IAA8 161 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 PRSS54Q6PEW0 395 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 REG3GQ6UW15 175 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 TOMM20LQ6UXN7 152 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 ZNF600Q6ZNG1 722 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 Q6ZRG5 221 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 TMUB2Q71RG4 321 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 TMEM61Q8N0U2 210 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 OR52B4Q8NGK2 314 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 ZNF431Q8TF32 576 aaPredicted RBP5.02□□□□□ -1.61
SDCBP-208ENST00000520228 ACY3Q96HD9 319 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 OR10C1Q96KK4 312 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 SPAG8Q99932 426 aaPredicted RBP5.02□□□□□ -1.61
SDCBP-208ENST00000520228 SEC22CQ9BRL7 303 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 GINS3Q9BRX5 216 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 TUBA4BQ9H853 241 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 MRPL36Q9P0J6 103 aaKnown RBP5.02□□□□□ -1.61
SDCBP-208ENST00000520228 SMPXQ9UHP9 88 aa5.02□□□□□ -1.61
SDCBP-208ENST00000520228 PAIP2BQ9ULR5 123 aaKnown RBP5.02□□□□□ -1.61
SDCBP-208ENST00000520228 PUS1Q9Y606 427 aaKnown RBP eCLIP5.02□□□□□ -1.61
SDCBP-208ENST00000520228 DNAH3Q8TD57 4116 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 IGHV3-49A0A0A0MS15 119 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 IGHV7-4-1A0A0J9YVY3 117 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 WRBO00258 174 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 CHEK1O14757 476 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 BCL2L11O43521 198 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 IGKV1-17P01599 117 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 CD7P09564 240 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 IGLC1P0CG04 106 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 OR10J1P30954 320 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 BMI1P35226 326 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 GPX4P36969 197 aaPredicted RBP5.01□□□□□ -1.61
SDCBP-208ENST00000520228 DEFA1P59665 94 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 DEFA3P59666 94 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 RAB11AP62491 216 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 HERV-K104P63124 156 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 IFITM3Q01628 133 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 IAH1Q2TAA2 248 aaPredicted RBP5.01□□□□□ -1.61
SDCBP-208ENST00000520228 TIGITQ495A1 244 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 SPANXN5Q5MJ07 72 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 KRTAP5-11Q6L8G4 156 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 SLC16A13Q7RTY0 426 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 OR4D5Q8NGN0 318 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 OR1S2Q8NGQ3 325 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 ENKURQ8TC29 256 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 Q8WTZ3 238 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 ZNF414Q96IQ9 312 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 RHPN1-AS1Q9BWJ2 59 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 GSKIPQ9P0R6 139 aa5.01□□□□□ -1.61
SDCBP-208ENST00000520228 IGHV3OR16-13A0A075B7E8 117 aa5□□□□□ -1.61
SDCBP-208ENST00000520228 IGHV3-74A0A0B4J1X5 117 aa5□□□□□ -1.61
SDCBP-208ENST00000520228 FAM25EA8MYX2 175 aa5□□□□□ -1.61
SDCBP-208ENST00000520228 OR11H12B2RN74 326 aa5□□□□□ -1.61
SDCBP-208ENST00000520228 SSSCA1O60232 199 aa5□□□□□ -1.61
SDCBP-208ENST00000520228 IL5P05113 134 aa5□□□□□ -1.61
SDCBP-208ENST00000520228 RD3LP0DJH9 198 aa5□□□□□ -1.61
SDCBP-208ENST00000520228 NPPCP23582 126 aa5□□□□□ -1.61
SDCBP-208ENST00000520228 YPEL3P61236 119 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms